Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H12
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78065-2|CAB01516.2|  145|Caenorhabditis elegans Hypothetical pr...    61   6e-10
AF003146-4|AAB54200.2|  650|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z78065-2|CAB01516.2|  145|Caenorhabditis elegans Hypothetical
           protein T09E8.3 protein.
          Length = 145

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 30/80 (37%), Positives = 41/80 (51%)
 Frame = +1

Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFLLVTH 591
           + L LI  G  +F  IY +I + +L  DY N  E C  LN  ++P+YI H   T L +  
Sbjct: 10  YLLALIAVGFCIFFAIYTVICVDELRTDYKNPIEQCRNLNQLILPEYIIHGTFTVLFIFS 69

Query: 592 GQLVLFFLNLPLFIWLTYEY 651
            QL+    NLPL  +  Y Y
Sbjct: 70  WQLISILANLPLAFYHIYTY 89


>AF003146-4|AAB54200.2|  650|Caenorhabditis elegans Hypothetical
           protein F56F4.3 protein.
          Length = 650

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 382 CVMILAETVLFSLCLIDTGAVLFLLIYYII 471
           CV +L   ++F  C  + G V F + Y+II
Sbjct: 67  CVTLLKNNMVFIECFFNHGGVYFFVPYFII 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,273
Number of Sequences: 27780
Number of extensions: 283300
Number of successful extensions: 765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)