BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H12
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 26 0.36
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 1.5
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 3.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 3.4
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 3.4
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 3.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 3.4
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 7.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 7.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.8
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.8 bits (54), Expect = 0.36
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 98 GI*YRTYYLHCCSLQVKANNWNWNMFVQLNP 190
GI +R+Y + C NNW W F++ P
Sbjct: 53 GINWRSYVV-CDVAYNNVNNWLWTPFIERGP 82
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 155 YLPSLVDYNNVGSRYGI 105
+LP +V YNN YG+
Sbjct: 103 WLPDIVLYNNADGEYGV 119
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 146 KANNWNWNMFVQLN 187
+ +NWNWN ++ N
Sbjct: 22 EGSNWNWNTLLRPN 35
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 146 KANNWNWNMFVQLN 187
+ +NWNWN ++ N
Sbjct: 66 EGSNWNWNTLLRPN 79
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 146 KANNWNWNMFVQLN 187
+ +NWNWN ++ N
Sbjct: 66 EGSNWNWNTLLRPN 79
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 146 KANNWNWNMFVQLN 187
+ +NWNWN ++ N
Sbjct: 66 EGSNWNWNTLLRPN 79
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 337 LYGVLLNRY*TNSYFCVMILAETVLFSLCLIDTGAVLFLLIYYIIT 474
+Y VL NR+ + +C + + VLFS I V+ L Y+ IT
Sbjct: 104 IYEVLENRWLFTTDWCDVWRSLDVLFSTASILNLCVISLDRYWAIT 149
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 602 YCFSSIYPCLY 634
YC S+I PC+Y
Sbjct: 52 YCNSAINPCIY 62
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 602 YCFSSIYPCLY 634
YC S+I PC+Y
Sbjct: 500 YCNSAINPCIY 510
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -3
Query: 197 RLMDSIAQTYSNSNYLPSLVDYNNVGSR 114
+++ S++ Y+ SNY +YNN +
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNYNNYNKK 107
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 439 AVLFLLIYYIIT 474
AVLFL +YY +T
Sbjct: 12 AVLFLALYYYLT 23
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 167 SNSNYLPSLVDYNNVGSRYGI 105
S + +LP +V YNN Y +
Sbjct: 112 SENIWLPDIVLYNNADGNYEV 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,286
Number of Sequences: 438
Number of extensions: 4005
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -