Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H05
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 210 1e-55
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 210 1e-55
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 151 6e-38
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 87 2e-18
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 76 4e-15
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 76 5e-15
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 72 6e-14
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 41 2e-04
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 34 0.020
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 34 0.020
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 34 0.020
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 29 0.44
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 27 1.8
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 27 2.3
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 27 3.1
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 4.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 5.4
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.2
SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.5
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 210 bits (513), Expect = 1e-55
Identities = 108/185 (58%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Frame = +3
Query: 99 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRC 278
E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR DEQ+R
Sbjct: 8 EVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERG 67
Query: 279 ITIKSTAISMFFELEXKDLVFITNPDXREKSE-KGFLINLIDSPGHVDFSSEVTAALRVT 455
+TIKSTAIS+F E+ D+ D +E ++ FL+NLIDSPGHVDFSSEVTAALRVT
Sbjct: 68 VTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVT 122
Query: 456 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFXRIV 635
DGAL QTETVLRQA+ ERI+P++ +NK+DR Y F R+V
Sbjct: 123 DGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVV 182
Query: 636 QNVNV 650
++VNV
Sbjct: 183 ESVNV 187
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 210 bits (513), Expect = 1e-55
Identities = 108/185 (58%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Frame = +3
Query: 99 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRC 278
E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR DEQ+R
Sbjct: 8 EVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERG 67
Query: 279 ITIKSTAISMFFELEXKDLVFITNPDXREKSE-KGFLINLIDSPGHVDFSSEVTAALRVT 455
+TIKSTAIS+F E+ D+ D +E ++ FL+NLIDSPGHVDFSSEVTAALRVT
Sbjct: 68 VTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVT 122
Query: 456 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFXRIV 635
DGAL QTETVLRQA+ ERI+P++ +NK+DR Y F R+V
Sbjct: 123 DGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVV 182
Query: 636 QNVNV 650
++VNV
Sbjct: 183 ESVNV 187
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 151 bits (367), Expect = 6e-38
Identities = 83/179 (46%), Positives = 111/179 (62%)
Frame = +3
Query: 111 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIK 290
+ + NIRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+DE R IT+K
Sbjct: 12 LQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMK 71
Query: 291 STAISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALX 470
S+AIS+FF+ + + + ++ EK +LINLIDSPGHVDFSSEV++A R+ DGA
Sbjct: 72 SSAISLFFK--------VISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFV 123
Query: 471 XXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFXRIVQNVN 647
QT TVLRQA +RIK IL +NKMDR + R+V+ VN
Sbjct: 124 LVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVN 182
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 87.0 bits (206), Expect = 2e-18
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Frame = +3
Query: 117 DKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF---TDTRKDEQDR 275
DKKR IRN+ + AH+D GK+T T+ ++ G I G+ D + E+++
Sbjct: 52 DKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREK 111
Query: 276 CITIKSTAISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 455
ITI+S A +E + N + EK + IN+ID+PGH+DF+ EV ALRV
Sbjct: 112 GITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVL 169
Query: 456 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
DGA+ QT TV RQ + I F+NKMDR
Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 76.2 bits (179), Expect = 4e-15
Identities = 49/157 (31%), Positives = 79/157 (50%)
Frame = +3
Query: 102 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCI 281
+RG+ + +RN +VIAH+DHGKSTL+D ++ G+I +F D + E+ R I
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106
Query: 282 TIKSTAISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 461
T+K+ SM + + +L+NLID+PGHVDF +EV +L +G
Sbjct: 107 TVKAQTCSMIYYYHG----------------QSYLLNLIDTPGHVDFRAEVMHSLAACEG 150
Query: 462 ALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMD 572
+ QT + A ++ + I +NK+D
Sbjct: 151 CILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVD 187
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 75.8 bits (178), Expect = 5e-15
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = +3
Query: 129 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DTRKDEQDRCITIKSTAI 302
+IRN+ +IAH+D GK+TLT+ ++ G + +T T D E+ R ITI S AI
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 303 SMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 482
S + + INLID+PGH DF+ EV ++ V DGA+
Sbjct: 87 SFTWRNQR--------------------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 483 XXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
QT+ V +QA I ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 72.1 bits (169), Expect = 6e-14
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Frame = +3
Query: 108 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCIT 284
G++ ++R+ V H+ HGKS L D LV + R+TDT E++R ++
Sbjct: 132 GLLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMS 191
Query: 285 IKSTAISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 464
IKST ++ L D+ K F ID+PGHVDF EV A + ++DG
Sbjct: 192 IKSTPLT----LAVSDM-----------KGKTFAFQCIDTPGHVDFVDEVAAPMAISDGV 236
Query: 465 LXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFXRIVQNV 644
+ T +++ AI + +L +NK+DR Y ++ V
Sbjct: 237 VLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEV 296
Query: 645 N 647
N
Sbjct: 297 N 297
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 40.7 bits (91), Expect = 2e-04
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Frame = +3
Query: 120 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTA 299
KK ++ N+ I HVDHGK+TLT ++ + A + D +E+ R ITI S
Sbjct: 50 KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAH 108
Query: 300 ISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 479
+ +E + +D PGH D+ + DGA+
Sbjct: 109 VE--YETANRHYAH------------------VDCPGHADYIKNMITGAATMDGAIIVVS 148
Query: 480 XXXXXXXQTETVLRQAIAERIKPI-LFMNKMD 572
QT L A +K I +++NK+D
Sbjct: 149 ATDGQMPQTREHLLLARQVGVKQIVVYINKVD 180
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 209
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 209
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 209
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.5 bits (63), Expect = 0.44
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 141 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDTRKDEQDRCITIKSTAISM 308
++++ HVDHGK+TL D+ K+ I + G T+ FT D+ + IT T M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231
Query: 309 FFELEXK 329
FE K
Sbjct: 232 AFEAMRK 238
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 84 ISRLXEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 194
IS L I + ++ N+ I HV HGKST+ ++
Sbjct: 7 ISELSPIHPAIISRQATINIGTIGHVAHGKSTVVKAI 43
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 475 LTVCLVCVYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLKLXN 609
L V + YKL+ RL +A S+ C WT LF SN+ N
Sbjct: 348 LNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLF--SNISPEN 390
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 3.1
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Frame = +3
Query: 138 NMSVIAHVDHGKSTLTDSLVSKAGII----------AGARAGETRF-----TDTRKDEQD 272
N+ I HVD GKSTL +++ G++ AG+ + D+ +E++
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEERE 299
Query: 273 RCITIKSTAISMFFELEXKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALR 449
+ T++ +FE E + + P KG++ N+I+ D V +A R
Sbjct: 300 KGKTVE--VGRAYFETEHRRFSLLDAP-----GHKGYVTNMINGASQADIGVLVISARR 351
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 427 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFXS-SSKNIEMAVDLMVMQRSCSSLRV 251
EE + P + K KK S F+ T S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 5.4
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 517 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 341
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 340 NTKSFXSSSKNIEMAV 293
++ S SSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -1
Query: 520 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 341
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 340 NTKSFXSSSKN 308
++ S SSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 163 ITASQPSRTRWFPR-PVSLLVREPERPVSLTRVRTNK 270
+T S T + P P S + REP P+S R+R+++
Sbjct: 48 LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84
>SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 246 TDTRKDEQDRCITIKSTAISMFFELEXKDLVFITNPD 356
T RK Q+ I I+ A FEL+ D + +TNPD
Sbjct: 61 TKWRKAMQNNSIPIQDLADD--FELDFPDTLDLTNPD 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,381,579
Number of Sequences: 5004
Number of extensions: 43555
Number of successful extensions: 149
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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