Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H03
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.31 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.54 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    25   0.71 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.0  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       21   6.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +3

Query: 198 PTRLGIYDVDDGNYNTQFKQTPCSIP-GCKHIADTLLDYENHYNATHRYSCAQCKKVLPS 374
           PT     +V D + +  F    C+   G KH+   L ++E  +     + C +C K    
Sbjct: 118 PTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHV---LQNHERTHTGEKPFECQECHKRFTR 174

Query: 375 PHFLDLHIQ 401
            H L  H++
Sbjct: 175 DHHLKTHMR 183


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +3

Query: 312 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQE-NHDSYFAVMAEKKPSVSVL 461
           ++H N  +RYSC  C       H L +H++   H     +  E  P   ++
Sbjct: 279 KSHSNV-YRYSCRDCSYATKYCHSLKIHLRRYGHTPNVVLDEEGNPCPDII 328


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 312 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQ 401
           ++H N  +RYSC  C       H L +H++
Sbjct: 37  KSHSNV-YRYSCRDCSYATKYCHSLKIHLR 65


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 178 CLYMINNQLDLEFTMWTME 234
           C Y++ ++L   FT W ME
Sbjct: 166 CSYVVRDKLLKAFTRWRME 184


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 315 FRNLTVYQLCVYILVCCTEFV 253
           F +L  YQ+ + I  CC E V
Sbjct: 237 FNSLFGYQIILVIFDCCLETV 257



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 235 FPSSTS*IPSLVGCLSCI 182
           FP++    PSL  C +C+
Sbjct: 33  FPTNQKYYPSLAKCYACL 50


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 129 EKLKEYGVGKRMLDDVLFIHDKQPTRLGI 215
           E  +  G+GKR+ + +L     +P ++ I
Sbjct: 2   ESRQRTGLGKRLFEHMLQTESIEPVKMAI 30


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 643 IANAFLFFFCIQPSNVRFYITXHYT*M-DRFIVI 545
           IAN  LF F +  S V F      + + +RF+++
Sbjct: 159 IANVLLFIFIVVKSGVAFQTIEFVSIIRNRFVIL 192



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 237 NFHRPHRKFQV 205
           N+HR HRK  V
Sbjct: 400 NYHRVHRKIMV 410


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 237 NFHRPHRKFQV 205
           N+HR HRK  V
Sbjct: 125 NYHRVHRKIMV 135


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 635 CLFVFFLYTAFKRSLLHYXTLHI 567
           C F+FF         L Y TLH+
Sbjct: 184 CAFIFFNMHLLFLLCLDYFTLHL 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,964
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)