Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H03
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         28   0.29 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.7  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.6  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   4.8  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   6.3  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 208 SLVGCLSCINRTSSSIRFPTPYSLSFSNRDFAFI 107
           +L G + C NR  + I +   Y +S S R+F FI
Sbjct: 540 ALCGLIFCNNRAMARILYVLLYEVSRSQREFEFI 573


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 342  SCA-QCKKVLPSPHFLDLHIQENHDS 416
            +CA QCK    +P ++D+H ++  DS
Sbjct: 1988 TCASQCKATEKAPKYVDVHCRDATDS 2013


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 351 ERTSTCASRCNGFRN 307
           E+  TCA RCN F++
Sbjct: 672 EKCPTCAGRCNEFKH 686


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 279 CKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHI 398
           C   A  LL  +N     H  + ++   +   PHF D+H+
Sbjct: 28  CTDYAKELLPVKNETARVHSPAESEGGNLRKYPHFQDIHV 67


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 625 FFFCIQPSNVRFYITXHYT*MDRFI 551
           FF C++P   +F+I    T M  F+
Sbjct: 230 FFTCLRPDFEQFFIRNRETVMQHFL 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,896
Number of Sequences: 2352
Number of extensions: 15405
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)