Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H02
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.71 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 341 RSGNKECPTCXKKLVSKRSLRPDPNFDLLISK--IYPSRDEYEAH 469
           +S N   P+C +   +    RPDP  +L+I++  I  S+  Y  H
Sbjct: 247 KSLNFRTPSCLETFHTLEKCRPDPPQNLVINESIIDLSQQTYNVH 291


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 521 VNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQT 634
           +N     +K+  QNR  ++ KN    +    +N N  T
Sbjct: 280 LNLTERQVKIWFQNRRMKNKKNSQRQAAQQQNNNNAAT 317


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 88  SVEFRIYWQNVFNRAFAK*NMGAIPLRVT 174
           SV   +Y   VFN  F + ++  +P+ VT
Sbjct: 304 SVSTSVYLAIVFNGLFTEEDVADVPINVT 332


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 554 SQNRPQRSXKNHDESSNASNSNGNVQTAQNGS 649
           + NR   S +   E+S  S ++GN    Q+G+
Sbjct: 394 NDNRNNTSSRAQGETSRNSKNSGNGGGVQDGA 425


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 584 NHDESSNASNSNGNVQTAQNGSN 652
           N++ + +A+N+N N     NG++
Sbjct: 127 NNNNTPSATNNNTNFNNNSNGAS 149


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  FPWNLEYIGKMSSTEPSQNKT 148
           F W L  +   S T+ S NKT
Sbjct: 328 FYWLLVMVAMFSRTQQSANKT 348


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 86  FPWNLEYIGKMSSTEPSQNKT 148
           F W L  +   S T+ S NKT
Sbjct: 284 FYWLLVMVAMFSRTQQSANKT 304


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 584 NHDESSNASNSNGNVQTAQNGSN 652
           N++ + +A+N+N N     NG++
Sbjct: 75  NNNNTPSATNNNTNFNNNSNGAS 97


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 584 NHDESSNASNSNGNVQTAQNGSN 652
           N++ + +A+N+N N     NG++
Sbjct: 258 NNNNTPSATNNNTNFNNNSNGAS 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,972
Number of Sequences: 336
Number of extensions: 3099
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)