Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H02
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 54 1e-07
SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028) 54 1e-07
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 49 3e-06
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 48 9e-06
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 47 1e-05
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 46 2e-05
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 46 3e-05
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 46 4e-05
SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048) 45 6e-05
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 45 6e-05
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 44 8e-05
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 44 8e-05
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 44 1e-04
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 44 1e-04
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 44 1e-04
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 42 3e-04
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 42 6e-04
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 41 8e-04
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 41 8e-04
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 41 0.001
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 40 0.001
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 40 0.001
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 40 0.002
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 39 0.004
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 38 0.009
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 38 0.009
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 37 0.016
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 36 0.022
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 36 0.029
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 36 0.038
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 36 0.038
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 36 0.038
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 35 0.050
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 35 0.050
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 35 0.066
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 35 0.066
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 35 0.066
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 34 0.087
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 34 0.12
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 33 0.15
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.20
SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046) 33 0.20
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 33 0.20
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 33 0.27
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 33 0.27
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 33 0.27
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.35
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.35
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 32 0.35
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 32 0.35
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 32 0.47
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 32 0.47
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 32 0.47
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 32 0.47
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 0.62
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 31 0.62
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 31 0.62
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 0.62
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 0.62
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 31 0.62
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_57279| Best HMM Match : Adeno_E3A (HMM E-Value=8.6) 31 0.81
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 31 0.81
SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5) 31 0.81
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 0.81
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 31 0.81
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 31 0.81
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_12918| Best HMM Match : Adeno_E3A (HMM E-Value=8.6) 31 0.81
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 1.1
SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) 31 1.1
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 30 1.4
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 30 1.4
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 30 1.9
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 29 2.5
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 29 2.5
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 29 3.3
SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 28 5.7
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 28 5.7
SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055) 28 7.6
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 28 7.6
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11) 28 7.6
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 28 7.6
SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09) 28 7.6
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 28 7.6
>SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 124 bits (298), Expect = 8e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +2
Query: 350 NKECPTCXKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNS 529
NKECPTC KKLVSKRSLRPDPNFD LI+KIYP R+EYEAHQE VL +LS H+Q +L +S
Sbjct: 19 NKECPTCRKKLVSKRSLRPDPNFDALIAKIYPDREEYEAHQEKVLQRLSKHHNQQALTSS 78
Query: 530 ITEGIKLQSQNRPQRSXKNHDE 595
I EG+KLQ+ NR QR K E
Sbjct: 79 IEEGLKLQAMNRAQRVRKRSSE 100
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
A + R + SEL CP+C ++L T+ C +C++CI T L +ECPTC + VS
Sbjct: 47 AKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTCGAESVSPD 106
Query: 395 SL 400
SL
Sbjct: 107 SL 108
>SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028)
Length = 116
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
A + R + SEL CP+C ++L T+ C +C++CI T L +ECPTC + VS
Sbjct: 47 AKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTCGAESVSPD 106
Query: 395 SL 400
SL
Sbjct: 107 SL 108
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXK 376
ATE +S + EL CP+CL+ LK+ C H C C+ +G KE CPTC +
Sbjct: 2 ATESHLS-QVFSEELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60
Query: 377 K-LVSKRSLRPDPNFDLLIS--KIYPSRDE-YEAHQELVLAKLSMSHSQASLVNSITEGI 544
L+ ++ P +L+ + P R E E H+ L K + + + +
Sbjct: 61 STLIPDGGVKALPTNTILVRLLEATPGRKERIEIHKALEKGK-PVVEEMTRKIRKLDTYL 119
Query: 545 KLQSQNRPQRSXKNHDES 598
S N + HDE+
Sbjct: 120 DSMSVNCQLTEERIHDEA 137
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTCXKK-LVSKRS 397
R+L+ EL C +C ++ T CLH FC +C+ L +K CP C KK V +R
Sbjct: 60 RALNDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRG 119
Query: 398 LRPDP 412
++ P
Sbjct: 120 VKGLP 124
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPDP- 412
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+ P
Sbjct: 316 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAPL 374
Query: 413 -NFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITE 538
LL P R A+ + A + + +L + E
Sbjct: 375 VLIQLLEGHPCPPRKRQRANSPVPAAAVVLDPQTRTLEQMLNE 417
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 236 HSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPD 409
+ E C ICLD+L+K +++K C H C+DC +A G K CP C + L LR
Sbjct: 20 NEEFHCAICLDVLEKPLSSK-CQHSCCSDCWESAFDLGEKHPACPICQETLADPNDLRRA 78
Query: 410 P 412
P
Sbjct: 79 P 79
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR---S 397
+ L+ ++C +C L T ECLH FC CI++ L++ + CP C ++ R +
Sbjct: 1358 KDLNPHIICVLCGGYLVDATTIVECLHSFCRSCIVSWLQA-SYHCPVCDTEVHKTRPFLN 1416
Query: 398 LRPDPNFDLLISKIYP 445
+RPD ++ K+ P
Sbjct: 1417 IRPDCVLQDIVYKLVP 1432
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPDP 412
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+ P
Sbjct: 169 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGGKHPACPICQETLADPNDLQRAP 226
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPDP 412
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+ P
Sbjct: 165 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 222
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPDP 412
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+ P
Sbjct: 73 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 130
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLRPDP 412
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+ P
Sbjct: 171 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 228
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSK 391
+CP+C D+ + KEC HR C C T RS +CP C L K
Sbjct: 54 LCPVCEDIFVSPVQIKECGHRLCQHCYKTIWRSPEPKCPKCSGDLDDK 101
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLR 403
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+
Sbjct: 313 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQ 367
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCXKKLVSKRSLR 403
E C ICLD+L+K +++K C H C+DC +A G K CP C + L L+
Sbjct: 639 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQ 693
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNKECPTCXKKLVSKRSLRPD 409
L E+ CPIC ++ + C H C C+ + G +CP C KK
Sbjct: 16 LQEEICCPICTEIFETPKCLPVCAHNVCLSCLKKMKIEQGFIKCPICRKKTKITNPAESL 75
Query: 410 PNFDLLISKI--YPSR-DEYEAHQELVLAK--LSMSHSQASLVNSITEGIKLQSQNRPQR 574
P LL+ + P R +E E +EL AK L + + S + + + N +
Sbjct: 76 PTNSLLVRLVENAPGRKEELELRKELKTAKRVLDAKLKKVLSIFSTYQSLSREILNHAET 135
Query: 575 SXKNHDESSNA 607
KN E +++
Sbjct: 136 MQKNIKEQADS 146
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTC 370
L+ + C +C L K T ECLH FC CI+T L+ S + CP+C
Sbjct: 58 LNPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSC 104
>SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)
Length = 233
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 185 QEVITDAT-EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKEC 361
+E++TD T + + + C C D++ +TTK CLH C C+ + ++ C
Sbjct: 82 EELLTDTTLDYTAFHQKVEELFACVCCQDLVLYPVTTK-CLHNICKGCLQRSFKAEVFTC 140
Query: 362 PTCXKKLVSKRSLRPDPNFDLLISKIYP 445
P C L L + D +++ ++P
Sbjct: 141 PYCRTDLGKTYKLSVNSALDAILNDLFP 168
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 218 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR- 394
+S + L+ ++C +C L T ECLH FC CI+ L + + CP C ++ R
Sbjct: 5 LSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYR-CPVCDAEIHKTRP 63
Query: 395 --SLRPDPNFDLLISKIYP 445
++R D ++ K+ P
Sbjct: 64 LLNIRADNVLQDIVYKVVP 82
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
CPICL+ + T + C H FC CI A +S +K CPTC
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKS-SKLCPTC 716
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
CPICL+ + T + C H FC CI A +S +K CPTC
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKS-SKLCPTC 791
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--NKECPTCXKKLVSKRSLRPDP 412
E C ICLD+L K +++K C H C+DC +A G + CP C + L L+ P
Sbjct: 115 EFHCAICLDVLGKPLSSK-CQHSCCSDCWKSAFELGETHPACPICHETLADPNDLQRAP 172
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--NKECPTCXKKLVSKRSLRPDP 412
E C ICLD+L K +++K C H C+DC +A G + CP C + L L+ P
Sbjct: 115 EFHCAICLDVLGKPLSSK-CQHSCCSDCWKSAFELGETHPACPICHETLADPNDLQHAP 172
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 218 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRS 397
+S + L+ ++C +C L T ECLH FC CI+ L + + CP C ++ R
Sbjct: 37 LSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYR-CPVCDAEIHKTRP 95
Query: 398 L 400
L
Sbjct: 96 L 96
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITAL-RSGNK---ECPTCXKKL 382
R L +LMCP+CL K M + C H FC C+ L +SG K +CP C ++
Sbjct: 12 RGLAEQLMCPVCLGEYKNPMLLR-CYHSFCLRCVQELLHQSGEKGVVKCPQCRTEM 66
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVS--KRSLRPDPN 415
+ CPICL +L + + C H FC C ++ N +CP C ++ S +R+ R
Sbjct: 34 DFTCPICLQLLVEPVVLP-CEHEFCKMCFTQNVQEANLQCPMCRIRISSWARRNARNGTL 92
Query: 416 FDL----LISKIYPSRDE 457
D I K++P R E
Sbjct: 93 VDRKRWDRIKKLFPKRCE 110
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 221 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRS--GNKECPTCXKK 379
S + EL C +CL+ ++ C H FC +C+ +S GN CPTC K
Sbjct: 12 SIEKVREELTCSVCLEQFREPKMLP-CFHTFCKECLEKTKQSFRGNLLCPTCRTK 65
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC---XKKLVSKRSLRPDPNFD 421
C +C ++L + +T+ C H FC DC+ +L ECP C K++++R D
Sbjct: 330 CKLCFNLLLEPVTSL-CGHSFCRDCLYRSL-DHRVECPCCRAPLTKILAERRQAVTSVLD 387
Query: 422 LLISKIYPSRDEYEAHQELVLAKLSMSHSQ 511
+I +P +YE + L A++ S+
Sbjct: 388 GMIKDFFPV--QYEKRKNLYAAEMEELRSK 415
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Frame = +2
Query: 230 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKL-VSKRS 397
++ E+ CPIC + ++ +C H C +C++ + ECP C + V K
Sbjct: 18 NIQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIVAVPKDG 77
Query: 398 LRPDPNFDLLISKI--YPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNR 565
+ P LL+ + P R E +A ++ + L+ + + + ++S +
Sbjct: 78 IDGFPTNSLLVRLVENAPGRKEKQAIKQAMTDYLNTKAFAEKSIKELRVQVGVESSKK 135
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGN-KECPTC-XKKLVSKRSL 400
L E CP+C+++ ++ + C H C +C+ ITA S ECP C + + + +
Sbjct: 16 LGDEGACPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPICRARSEIPQNGV 75
Query: 401 RPDPNFDLLISKI--YPSRDEYEA-HQELVLAKLSMSHSQ--ASLVNS 529
P LL+ I P E +A L AK S+ ++ +VNS
Sbjct: 76 NSFPTNTLLVRIIENTPGGKEQKAIKSALKKAKESLEEARNYREMVNS 123
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
R + L CP C K + TK C H FC +C+ T + ++CP C
Sbjct: 98 RQYKARLTCPCCNTRKKDAILTK-CFHVFCYECLKTRYDTRQRKCPKC 144
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITAL-RSGNKECPTCXKKLVS 388
+ L+C IC+ +L+ +TT C H FC C+ T L R + CP+C ++S
Sbjct: 12 IDQNLLCNICVGVLENAITT-ICGHSFCESCLETWLSRPEVQSCPSCRSHVLS 63
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG----NKECPTCXKKLVSKR 394
RS H CPIC K CLH +C+DC+ +RS +CP C + +
Sbjct: 651 RSAHESSCCPICSRPFKSPKILP-CLHTYCSDCVKEIVRSRLGKLTLQCPKCPRSVDIPD 709
Query: 395 SLRPD 409
PD
Sbjct: 710 PFTPD 714
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNK--ECPTCXKKL 382
EL+CPICLD K+ T C+H C C+ A R ++ CP C ++
Sbjct: 18 ELLCPICLDEFKEPKTL-SCMHDLCRKCLEDMAARESSRVIRCPLCRSEI 66
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
+ L CP C K + TK C H FC +C+ T + ++CP C
Sbjct: 350 ARLTCPCCNTRKKDAILTK-CFHVFCYECLKTRYDTRQRKCPKC 392
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALR---SGNKECPTC 370
L E+ CPICL+ K CLH FC +C++ A R G CP C
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQC 58
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALR---SGNKECPTC 370
L E+ CPICL+ K CLH FC +C++ A R G CP C
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQC 58
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 HSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTC 370
H L+C IC + CLH FC +C+ ++RS + CPTC
Sbjct: 12 HYRLVCGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTC 57
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +2
Query: 224 PRSLHSELMCPICLDMLKKTM--TTKECLHRFCNDCIITALRSGNK--ECPTCXKKLVSK 391
P H C +CL+ M T C FC C+ L+ ++ +CP C ++ +
Sbjct: 773 PEGYHLTFTCSLCLEDRTNAMLLTHDGCGRMFCRQCLGVMLKDADRTIDCPICTRRSNTS 832
Query: 392 RSLR 403
RSL+
Sbjct: 833 RSLK 836
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALRSGNKE--CPTCXKK 379
++ E CP+CL+ + + C H C C+ A S +KE CP C K+
Sbjct: 17 INDECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRKE 68
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 36.7 bits (81), Expect = 0.016
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGN-KECPTC-XKKLVSKRSL 400
L E CP+C+++ + + C H C +C+ IT S ECP C + + + +
Sbjct: 16 LGDEGACPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPICRARSEIPQNGV 75
Query: 401 RPDPNFDLL---ISKIYPSRDEYEAHQELVLAKLSMSHSQ--ASLVNS 529
P LL I I +++ L AK S+ ++ +VNS
Sbjct: 76 NSFPTNTLLVRIIENIQGRKEQKAIKSALKKAKESLEEARNYREMVNS 123
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTCXKKLV 385
E+ CP+CL++ ++ + C H C C+ +T + CP C + V
Sbjct: 20 EISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVCRSESV 69
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALR 343
+ CPIC + + T++C HRFC C+ LR
Sbjct: 39 DYQCPICQLPFRDPVQTRDCGHRFCESCLEPILR 72
>SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 230 SLHSELMCPICL-DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
SL ++C ICL ++ K+T EC H C++ LRS CP C + LVS +
Sbjct: 20 SLEEPILCSICLEEVQKETSAELECGHGNHLKCVL-RLRSAT--CPVCRRPLVSDK 72
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGN--KECPTC 370
CPICLD L T+ C H FC C+ + + CP C
Sbjct: 65 CPICLDPLDDPSITR-CAHVFCTGCLTDVIENEGLAPRCPMC 105
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTC 370
L CP+C +M CLH FC C+ + RS CP+C
Sbjct: 143 LFCPLCHEMFANPRLLP-CLHTFCKRCLENLVPPRSHTLSCPSC 185
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 182 PQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC 325
P V+T ++A ++C C + L EC+ C DC
Sbjct: 201 PNFVVTTMIDVAAVRNHDQKPILCSSCEEKLPAAARCIECMDFLCYDC 248
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
+ E C +C ++ + TT C H FC C+ + LR N CP C
Sbjct: 365 MEDEFSCIVCQELFIRA-TTLTCSHSFCEYCLQSWLRKRN-TCPIC 408
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRS 397
C ICL+ C H+ DC + +R+G + CP C L + S
Sbjct: 1985 CCICLEDAFTGCQVLACSHKVHRDCAVAMVRNGVRNCPICRHPLYTTTS 2033
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVS 388
+ CPIC ++L K + T H C C+ AL + N CP C L S
Sbjct: 83 DFYCPICCELLDKPVET-IFTHNACGACLTQAL-AVNSSCPVCKTILSS 129
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCXKKL 382
CPICL +K +TK+ C H F CI+ L N CP C +L
Sbjct: 62 CPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTN-SCPVCRHEL 106
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 242 ELMCPICLDML-----KKTMTTKECLHRFCNDCI--ITALRSGNKECPTCXKKLVSKRSL 400
+L CP+C ++ +C H FC +CI I L+ ECPTC + + S+
Sbjct: 327 DLTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCKLRTLLTSSV 386
Query: 401 R-PDPNFDLLISKIYPSRDE 457
N D+L + ++E
Sbjct: 387 DCLKKNMDILTAVFAAEQEE 406
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKLVSKRSLRPD 409
S++ C +CL+ + CLH +C C+ + + + CP C +K+V D
Sbjct: 13 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKD 71
Query: 410 PNFDLLIS 433
D +++
Sbjct: 72 LKVDFMLN 79
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKLVSKRSLRPD 409
S++ C +CL+ + CLH +C C+ + + + CP C +K+V D
Sbjct: 13 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKD 71
Query: 410 PNFDLLIS 433
D +++
Sbjct: 72 LKVDFMLN 79
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ L CLH FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSICIEHLNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
L E CPIC + + +EC HRFC C+
Sbjct: 20 LPEEYECPICQLAFRDPIQIEECGHRFCQSCL 51
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
A+ + V P L + +C C +L + K C HR C C T L S + CP C +L
Sbjct: 417 ASNLFVYP--LQKKYICLDCEGLLWYPVQIKPCGHRVCTKC-YTKLLSSSARCPGCMDEL 473
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 191 VITDATEIAV-SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC---IITALRSGNKE 358
+ DAT S + +L C IC +L+ CLH +C C II +S
Sbjct: 124 IYEDATHRETGSQDDIRQQLACGICHALLRDARVLP-CLHTYCRRCIEDIILHRQSVRAH 182
Query: 359 CPTCXKKL 382
CP+C +++
Sbjct: 183 CPSCNREI 190
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +2
Query: 209 EIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCX 373
E+A S R L E+ C +C++ CLH FC C+ + + G CP C
Sbjct: 120 EMATSASRRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGKGKLVCPLCK 178
Query: 374 KKLVSKRSLRPDPNFDLLISKI 439
+ + P + +I+ I
Sbjct: 179 SEFQISPADVPSLKVNFMINSI 200
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = +2
Query: 173 HRTPQEVITDATEIA---VSPRSL-HSE 244
HRTPQE +T ATE+A +SPRS HS+
Sbjct: 233 HRTPQEALTSATEVAFTFISPRSFDHSK 260
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ CLH FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046)
Length = 488
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 245 LMCPICLDMLKK-TMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
++C ICL+ ++K T EC H C++ LRS CP C + LVS +
Sbjct: 288 ILCSICLEEVQKETSVELECGHGNHLKCVLR-LRSAT--CPVCRRPLVSDK 335
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 230 SLHSELMCPICLDML--KKTMTTKECLHRFCNDCII 331
++ + CP+CL L +K T C+H FC +CI+
Sbjct: 95 TMSNSAQCPVCLMSLSEQKLGTPNSCMHVFCLECIL 130
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKECLHRFCNDCIIT---ALRSGNKECP 364
L+C IC ++L++ + T C H FC C+ T A N++CP
Sbjct: 16 LLCGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLEENEKCP 57
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 32.7 bits (71), Expect = 0.27
Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 8/155 (5%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-----CPT 367
A E + S L+C +C K CLH FC CI R + CP
Sbjct: 46 AAEKRANKLSKDPALICRVCNQRFNKPKLL-HCLHSFCQSCIEGLARKTEDDCLELICPV 104
Query: 368 CXKKLVSKRSLRPDP-NFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGI 544
C RS+ P NF L + + E H ++ A + + E +
Sbjct: 105 CDSLGAIPRSVESLPTNFALWDTVRKHANTTSEEHFIVICANCKDESNATGVCVQCAEFL 164
Query: 545 --KLQSQNRPQRSXKNHDESSNASNSNGNVQTAQN 643
K S +R R + H + AS + + + Q+
Sbjct: 165 CDKCTSAHRRVRVTRTHCVTPLASQTGPDREEEQS 199
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 230 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE----CPTC 370
+L L C C ++ K T CLH FC +C+ RS + CPTC
Sbjct: 9 NLEELLTCRQCSNVFKNPRITP-CLHSFCAECLNEIARSRPYQAYIACPTC 58
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKL 382
S++ C +CL+ + CLH +C C+ + + + CP C +K+
Sbjct: 22 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 71
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +2
Query: 209 EIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
E+A S R L E+ C IC++ CLH FC C+ + + G CP C
Sbjct: 5 EMATSASRRLQDEVTCSICIEHFDDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 62
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLR 403
+S+ ++ C IC++ + + C H C +C + L K CP C + S LR
Sbjct: 3 QSVTEKVKCLICMEPYTVPLVSISCWHVHCEECWLRTL-GAKKLCPQC-NMITSPNDLR 59
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 230 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCII--TALRSGNKE---CPTCXKKL 382
SL E C +C + K C H FCN+C+ +A G+ E CP+C ++
Sbjct: 91 SLRQEAECSLCHKTPSEPKILK-CFHTFCNECLTEKSAEFKGDGETFSCPSCKTRI 145
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C +C++ CLH FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C IC++ CLH FC C+ + + G CP C
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C IC++ CLH FC C+ + + G CP C
Sbjct: 7 RRLEGEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = +2
Query: 173 HRTPQEVITDATEIA---VSPRSL-HSE 244
HRTPQE +T ATE+A ++PRS HS+
Sbjct: 246 HRTPQEALTSATEVAFTFITPRSFDHSK 273
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C IC++ CLH FC C+ + + G CP C
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C IC++ CLH FC C+ + + G CP C
Sbjct: 6 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 56
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
+ +C +C ++ + C H C+ C N++CP C ++ + L+ + +
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAERV----NRKCPECREEFGATAELKENISLK 108
Query: 422 LLISKIYP--SRDEYEAHQELVLAKLSMSHSQASL---VNSITEGIKLQSQNRPQRS 577
+I ++ R + LVL L + S+ ++ +G+ L N +RS
Sbjct: 109 RIIRRLQGKCKRCPFNGELGLVLDHLCPERERQSVRTQAATLRDGLNLHLTNCEERS 165
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 149 WELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
W+L H P EI S + C +C K + TK CLH FC C
Sbjct: 212 WQLEREWEHGKPDSADPHQYEID-SDNEDNLPFACIMCRKTFKNPVVTK-CLHYFCEACA 269
Query: 329 ITALRSGNKECPTC 370
+ + N +C C
Sbjct: 270 LQHYKK-NSKCFVC 282
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
+ +C +C ++ + C H C+ C N++CP C ++ + L+ + +
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAERV----NRKCPECREEFGATAELKENISLK 108
Query: 422 LLISKIYP--SRDEYEAHQELVLAKLSMSHSQASL---VNSITEGIKLQSQNRPQRS 577
+I ++ R + LVL L + S+ ++ +G+ L N +RS
Sbjct: 109 RIIRRLQGKCKRCPFNGELGLVLDHLCPERERQSVRTQAATLRDGLNLHLTNCEERS 165
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 254 PICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
P C L K + + C H FC DC I+ + CP C ++
Sbjct: 484 PTCQVKLAKQIMLRTCKHIFCEDC-ISLWFDREQTCPMCRARV 525
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C +C++ CLH FC C+ + + G CP C
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ C H FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 224 PRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXK--KLVSKRS 397
PR L L C +C ++ ++ CLH C C + R+ N C C KLV R
Sbjct: 33 PR-LRQSLSCRVCRGLVVDPFGSQSCLHYVCRGC-LRKKRALNPGCRWCLNLDKLVEDRQ 90
Query: 398 LR 403
+
Sbjct: 91 TK 92
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKL 382
S++ C +CL + CLH +C C+ + + + CP C +K+
Sbjct: 13 SDVTCSLCLGQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 62
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 224 PRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXK--KLVSKRS 397
PR L L C +C ++ ++ CLH C C + R+ N C C KLV R
Sbjct: 33 PR-LRQSLSCRVCRGLVVDPFGSQSCLHYVCRGC-LRKKRALNPGCRWCLNLDKLVEDRQ 90
Query: 398 LR 403
+
Sbjct: 91 TK 92
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ C H FC C+ + + G CP C +
Sbjct: 7 RRLEDEVRCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKIYPSRD 454
+ P + +I + S D
Sbjct: 66 ADVPSLKVNFMILPLLTSDD 85
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ C H FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ C H FC C+ + + G CP C +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVSKR 394
R L E+ C IC++ C H FC C+ + + G CP C +
Sbjct: 6 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 64
Query: 395 SLRPDPNFDLLISKI 439
+ P + +I+ I
Sbjct: 65 ADVPSLKVNFMINSI 79
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 248 MCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
+C ICLD K+ + C H + C+ L G + CP C + + + +
Sbjct: 300 VCAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKRPVETSK 350
>SB_57279| Best HMM Match : Adeno_E3A (HMM E-Value=8.6)
Length = 263
Score = 31.1 bits (67), Expect = 0.81
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 101 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 83 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 133
Query: 275 KKTMTTKECLHRFCNDCIITALRSGNKECP 364
K ++ L C+ I+ ALR N CP
Sbjct: 134 KNIQSSMIPLINHCS-IIVEALRKDN--CP 160
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 31.1 bits (67), Expect = 0.81
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 101 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 604 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 654
Query: 275 KKTMTTKECLHRFCNDCIITALRSGNKECP 364
K ++ L C+ I+ ALR N CP
Sbjct: 655 KNIQSSMIPLINHCS-IIVEALRKDN--CP 681
>SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5)
Length = 632
Score = 31.1 bits (67), Expect = 0.81
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 101 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 131 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 181
Query: 275 KKTMTTKECLHRFCNDCIITALRSGNKECP 364
K ++ L C+ I+ ALR N CP
Sbjct: 182 KNIQSSMIPLINHCS-IIVEALRKDN--CP 208
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCXKKLVS 388
R L E+ C IC++ C H FC C+ + + G CP C + S
Sbjct: 7 RRLQDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQS 63
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 31.1 bits (67), Expect = 0.81
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 101 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 580 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 630
Query: 275 KKTMTTKECLHRFCNDCIITALRSGNKECP 364
K ++ L C+ I+ ALR N CP
Sbjct: 631 KNIQSSMIPLINHCS-IIVEALRKDN--CP 657
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNKE--CPTC 370
+ L E+ C IC++ CLH FC C+ A SG + CP C
Sbjct: 7 KQLEDEVTCAICIEHFTDPRLLP-CLHTFCRHCLEDLAEHSGKGKLVCPLC 56
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTC 370
+C +C + CLH FC +C+ + R G CP C
Sbjct: 404 ICGVCRETYTDPRVAP-CLHSFCKECVTKLVTERQGKFVCPDC 445
>SB_12918| Best HMM Match : Adeno_E3A (HMM E-Value=8.6)
Length = 214
Score = 31.1 bits (67), Expect = 0.81
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 101 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 5 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 55
Query: 275 KKTMTTKECLHRFCNDCIITALRSGNKECP 364
K ++ L C+ I+ ALR N CP
Sbjct: 56 KNIQSSMIPLINHCS-IIVEALRKDN--CP 82
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C IC++ C H FC C+ + + G CP C
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)
Length = 222
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = +2
Query: 347 GNKECPTCXKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVN 526
G+KE C KK ++ + F+L ++EA + L + S ASL+N
Sbjct: 99 GDKEIGKCKKKKKARTTFTGRQIFEL--------EKQFEAKKYLTATERS---DMASLLN 147
Query: 527 SITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQNGS 649
+K+ QNR + K E + +N N + Q + G+
Sbjct: 148 VTETQVKIWFQNRRTKWKKQEKEINEDANHNSDEQRTECGN 188
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
+C IC + K + + C H C+ C+ G CP C + +++ DP
Sbjct: 184 LCKICAEN-NKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPIKDIQTVVVDP 237
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTC-XKKLVSKRSLR 403
L L C +C +++ CLH FC C+ + + CP C + VSK +LR
Sbjct: 14 LSKHLNCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQCHTEAKVSKAALR 72
Query: 404 PDP-NFDL 424
P NF L
Sbjct: 73 GLPTNFFL 80
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCXKKL 382
++ C +CL+ + CLH +C C+ + + + CP C +K+
Sbjct: 13 DVTCCLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 61
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
+C IC + K + + C H C+ C+ G CP C + +++ DP
Sbjct: 380 LCKICAEN-NKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPMKDIQTVVVDP 433
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTC 370
R L E+ C +C++ C H FC C+ + + G CP C
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGKGKLVCPLC 57
>SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 554 SQNRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
S N R+ KN++ ++N++N+N N QN N
Sbjct: 69 SNNNNDRNKKNNNNNNNSNNNNNNNNRNQNNIN 101
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 500 SHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
S+++AS NSI N + S N+D + +N+N N N +N
Sbjct: 44 SNNKASDNNSINGNNNNNKSNDNKDSNNNNDRNKKNNNNNNNSNNNNNNNN 94
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSG-----NKECPTCXK 376
+CP C++ + CLH FC+ C+ L N CP C +
Sbjct: 14 VCPKCMNAYENPKVLP-CLHTFCSQCLSEELHRDCEGRLNVTCPKCLR 60
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 503 HSQASLVNSITEGIKLQSQNRPQRSXKNHDESSN----ASNSNGNVQTAQN 643
HS A ++N + +G+ +QSQ P ++ + SN A+ +NG QT N
Sbjct: 2861 HSNARVLNKLGKGLNVQSQ--PDQTDGTYQTLSNSYSPANQTNGTYQTLSN 2909
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 494 SMSHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
S S S +S +S + G S + + + S+++SNSN N ++ N S+
Sbjct: 135 SNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSS 187
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +2
Query: 272 LKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFDLLISKIYPSR 451
+KKT K + C LRS K C K L+ + N D L++ S+
Sbjct: 732 IKKTNNNKNTRSSSSSPCHAAPLRSSLKPCFKEPKSLIRTETRLAKHNNDSLVNIKQQSK 791
Query: 452 DEYEAHQELVLAKLSMSHSQASL 520
D++ + +L K + Q L
Sbjct: 792 DKHAGIRRELLKKRELRRKQREL 814
>SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 399
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 218 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKEC 361
+S + L+ ++C +C L T ECLH + C T+ +EC
Sbjct: 36 LSLKELNPHIICVLCGGYLVDATTIIECLHSWQITCFRTSCTKLYREC 83
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGN 352
L C IC +L++ + T C HR C C +LR N
Sbjct: 28 LDERFRCTICKHVLQEPLQTT-CGHRICESCFELSLRHLN 66
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNK-ECPTCXKKL 382
++ C +CL+ + CLH +C C+ + G+ CP C +K+
Sbjct: 13 DVTCCLCLEQYQDPRVLA-CLHTYCRHCLESLAEHSQGDSISCPQCREKI 61
>SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = +2
Query: 278 KTMTTKECLHRFCN---DCIITALRSGNKE------CPTCXKKLVSKRSLRPDPNFDLLI 430
K++ L R C DCI L +K+ CP C K V++RSL P+P ++
Sbjct: 197 KSLIPNSSLQRNCGREGDCINQVLEKSSKKSKNKWFCPLC-KTPVTRRSLTPNPKLANIV 255
Query: 431 SKIYPSRD 454
+ + +D
Sbjct: 256 AAVKNLQD 263
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 524 NSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
N+ T S N + KN++ + N++N+N N T N SN
Sbjct: 60 NTTTNNNNSNSSNNNNNNNKNNNNN-NSNNNNNNSNTNNNNSN 101
>SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 200 DATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 316
D + PR+ ++ CP+C+ + +T C H FC
Sbjct: 83 DEIQAPEPPRAFSNDRQCPVCITD-ARFLTMTNCGHEFC 120
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDC----IITALRSGNKECPTC 370
++ C +CLD+ CLH +C C + + G CP C
Sbjct: 13 DVTCLLCLDIFTDPRLLP-CLHTYCKKCLEDLVSQCQKKGEIYCPQC 58
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 251 CPICLDML--KKTMTTKECLHRFCNDCI 328
C +C+D+ + +T C RFC+DC+
Sbjct: 1005 CIVCMDLKPENRMITMLNCQCRFCSDCV 1032
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSL 400
L S CP+C D + + H C++C R CPTC L S R+L
Sbjct: 31 LTSIFECPVCFDYVLPPILQCSSGHLVCSNC-----RPKLTCCPTCRGPLGSIRNL 81
>SB_51053| Best HMM Match : Gp5_C (HMM E-Value=0.00055)
Length = 199
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 512 ASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGN 625
A+ + T + + Q + QRS N D +SN SNSN N
Sbjct: 71 ATATATATVTVTVTQQRQRQRSNSNSDSNSN-SNSNSN 107
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 441 IPVGTNTRLTKNWFWLN*ACPIH 509
+P+GT + NWFW P H
Sbjct: 197 VPMGTTSETRVNWFWFTRTVPGH 219
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK-----ECPTCXKKL 382
L L C C K CLH FC C+ R G K CPTC +L
Sbjct: 12 LIERLTCSACKGFYKNPKRLP-CLHAFCCHCLKKTQR-GTKLCERMRCPTCDYEL 64
>SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11)
Length = 632
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 441 IPVGTNTRLTKNWFWLN*ACPIH 509
+P+GT + NWFW P H
Sbjct: 323 VPMGTTSETRVNWFWFTRTVPGH 345
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +2
Query: 197 TDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC---IITALRSGNKECPT 367
T+ ++ V ++ L CPI + +C H C D + G+ +CP
Sbjct: 913 TNGSDDGVEQTAIKVSLKCPITFRRISLPARGHDCKHIQCFDLESYLRLNCERGSWKCPV 972
Query: 368 CXKKLVSKRSLRPDPNFDLLISKIYPSRDE 457
C V + ++ P+ + + K P +DE
Sbjct: 973 CNSCEVEEVTIDPNSQWKPVTVKQEP-KDE 1001
>SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09)
Length = 241
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 361 TLFVARSQSGYNTVVAESMEAFFCSHCLFEHIQT 260
T +A + YN + ++S A+ C+ CLF + T
Sbjct: 35 TKCIAMTAQSYNRLGSDSQLAWLCNKCLFPNFST 68
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 221 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIIT--ALRSGNKE--CPTCXK 376
SP+SL+ C C + + +CLH FC C+ T L +G CP C K
Sbjct: 10 SPQSLN----CRACHKVFTEPKIL-DCLHTFCQKCLGTHDILGAGTNSIVCPLCRK 60
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 80 LIFPWNLEYIGKMSSTEPSQNKTWELSLYELHRTPQEV-ITD 202
L++PW L+ IG + KTW+LS RTP++V +TD
Sbjct: 534 LVYPW-LQNIGFSLAYCSLALKTWKLSTTFRARTPRKVEVTD 574
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,884,788
Number of Sequences: 59808
Number of extensions: 378176
Number of successful extensions: 1383
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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