Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H02
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 106 1e-23
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 100 1e-21
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 54 8e-08
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 53 1e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 52 3e-07
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 51 8e-07
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 50 1e-06
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 50 2e-06
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 47 1e-05
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 46 3e-05
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 45 4e-05
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 45 4e-05
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 42 4e-04
At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger) fa... 42 5e-04
At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger) fa... 42 5e-04
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 42 5e-04
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 40 0.001
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 39 0.003
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 39 0.003
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 38 0.008
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 38 0.008
At5g47430.1 68418.m05844 expressed protein 37 0.010
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 37 0.010
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 37 0.010
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 37 0.013
At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) fa... 36 0.018
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At2g15260.1 68415.m01740 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 35 0.041
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 35 0.054
At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At2g47700.1 68415.m05957 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 34 0.094
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 33 0.12
At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At4g13490.1 68417.m02105 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 33 0.12
At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 33 0.16
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At1g71980.1 68414.m08320 protease-associated zinc finger (C3HC4-... 33 0.22
At5g16910.1 68418.m01982 cellulose synthase family protein simil... 32 0.29
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At1g02730.1 68414.m00226 cellulose synthase family protein simil... 32 0.29
At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 32 0.38
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 32 0.38
At3g61790.1 68416.m06933 seven in absentia (SINA) family protein... 32 0.38
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At4g17410.1 68417.m02607 expressed protein 31 0.50
At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At3g45470.1 68416.m04910 zinc finger protein-related contains lo... 31 0.50
At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At3g14250.1 68416.m01804 zinc finger protein-related contains we... 31 0.50
At1g60190.1 68414.m06780 armadillo/beta-catenin repeat family pr... 31 0.50
At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 31 0.50
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At4g09560.1 68417.m01571 protease-associated zinc finger (C3HC4-... 31 0.66
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 31 0.66
At2g25380.1 68415.m03039 zinc finger protein-related very low si... 31 0.66
At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit, ... 31 0.88
At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 31 0.88
At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At1g15810.1 68414.m01897 ribosomal protein S15 family protein co... 31 0.88
At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 30 1.2
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 30 1.2
At2g45135.1 68415.m05617 expressed protein ; expression supporte... 30 1.5
At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g17145.1 68414.m02090 expressed protein 30 1.5
At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At2g16090.1 68415.m01845 zinc finger protein-related contains si... 29 2.0
At1g78280.1 68414.m09122 transcription factor jumonji (jmjC) dom... 29 2.0
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 29 2.0
At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit, ... 29 2.7
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 29 2.7
At2g25360.1 68415.m03035 zinc finger protein-related contains we... 29 2.7
At1g22510.1 68414.m02812 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 3.5
At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 29 3.5
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 29 3.5
At1g72175.1 68414.m08345 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 28 4.7
At3g10380.1 68416.m01244 exocyst complex component-related ident... 28 4.7
At1g23000.1 68414.m02874 heavy-metal-associated domain-containin... 28 4.7
At5g66160.2 68418.m08334 protease-associated zinc finger (C3HC4-... 28 6.2
At5g66160.1 68418.m08335 protease-associated zinc finger (C3HC4-... 28 6.2
At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family pr... 28 6.2
At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 28 6.2
At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At5g05170.1 68418.m00550 cellulose synthase, catalytic subunit (... 27 8.2
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At3g19270.1 68416.m02444 cytochrome P450 family protein similar ... 27 8.2
At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At1g79810.2 68414.m09319 Pex2/Pex12 N-terminal domain-containing... 27 8.2
At1g79810.1 68414.m09318 Pex2/Pex12 N-terminal domain-containing... 27 8.2
At1g58100.1 68414.m06585 TCP family transcription factor, putati... 27 8.2
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 106 bits (254), Expect = 1e-23
Identities = 51/129 (39%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +2
Query: 176 RTPQEVITDATE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGN 352
R+P + D +E + + + ++ CPICL ++KKT T ECLHRFC +CI ++R GN
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 169
Query: 353 KECPTCXKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSI 532
ECP C K S+RSLR DP FD LI+ ++ + D YE +EL + M+ ++ + SI
Sbjct: 170 NECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYE-EEELAFHEDEMARNK-QIQASI 227
Query: 533 TEGIKLQSQ 559
+ + QS+
Sbjct: 228 AQISQRQSE 236
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 100 bits (239), Expect = 1e-21
Identities = 40/93 (43%), Positives = 62/93 (66%)
Frame = +2
Query: 194 ITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCX 373
++++ + V + ++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTC
Sbjct: 84 LSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCR 143
Query: 374 KKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 472
K S+RSLR DPNFD LI+ ++ + D++E +
Sbjct: 144 KHCASRRSLRDDPNFDALIAALFKNIDKFEEEE 176
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 54.0 bits (124), Expect = 8e-08
Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 4/151 (2%)
Frame = +2
Query: 212 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCXKKLVS 388
I V ++ + L C IC ++L+ T ECLH FC CI + E CP C L S
Sbjct: 3 IKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGS 62
Query: 389 K--RSLRPDPNFDLLISKIYP-SRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQ 559
LRPD N L +KI+ R + +A + L S +SLV S
Sbjct: 63 TPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVSLPGKRKERSISSLVVSTPMVSAQAGT 122
Query: 560 NRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
R + E N S + V+ ++ +
Sbjct: 123 TRRRTKAPTRKELRNGSLAERTVKKEESSGD 153
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCXKKL--VSKRSLRPDPN 415
+ CP+C +L+ T ECLH FC CI + E CP C L LRPD
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHI 77
Query: 416 FDLLISKIYPSRDEYEAHQELVLA-KLSMSHSQASLVNSITEGIKLQSQ 559
L +K++P + + E E+V + L + S+ + + ++ +Q
Sbjct: 78 LQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSAQ 126
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + L P+
Sbjct: 46 LDKDLLCPICMQIIKDAFLT-ACGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQ-LYPNF 102
Query: 413 NFDLLISK 436
D L+ K
Sbjct: 103 LLDKLLKK 110
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
EL CPICL + ++ C H FCN CI+ +++ + CP C K +R +R P+ D
Sbjct: 348 ELKCPICLSLYNSAVSLS-CNHVFCNACIVKSMKM-DATCPVC-KIPYHRREIRGAPHMD 404
Query: 422 LLISKIYPSRDE 457
L+S IY + ++
Sbjct: 405 SLVS-IYKNMED 415
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
AV+P + CPICL + ++TK C H FC CI AL S +CPTC KK+ K
Sbjct: 115 AVAPPVEEPKFSCPICLCPFTQEVSTK-CGHIFCKKCIKNAL-SLQAKCPTCRKKITVKD 172
Query: 395 SLR 403
+R
Sbjct: 173 LIR 175
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
A +P + CPIC+ + M+TK C H FC CI A+ K CPTC KK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 395 SLR 403
+R
Sbjct: 194 LIR 196
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
A +P + CPIC+ + M+TK C H FC CI A+ K CPTC KK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 395 SLR 403
+R
Sbjct: 194 LIR 196
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
A +P + CPIC+ + M+TK C H FC CI A+ K CPTC KK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 395 SLR 403
+R
Sbjct: 194 LIR 196
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +2
Query: 128 EPSQNKTWELSLYELHRTPQEVITDATEIAV-----SPRSLHSELMCPICLDMLKKTMTT 292
E + K E L EL++ +E+ +++ E A+ ++ + L C +C D K+ +
Sbjct: 285 ERREKKKLEEELMELNKELEELGSESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIV 344
Query: 293 KECLHRFCNDCIITALRSGNKECPTC 370
K C H FC CI +L +++CP C
Sbjct: 345 K-CYHLFCQQCIQRSLEIRHRKCPGC 369
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKECLHRFCNDCIITA-LRSGNKECPTCXKKL--VSKRSLRPDPN 415
L CPIC + K T ECLH FC CI + CP C L LR D
Sbjct: 14 LACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCT 73
Query: 416 FDLLISKIY 442
+ L KIY
Sbjct: 74 WQDLKLKIY 82
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCXKKLVSKRSLRPDP 412
CPICL+ L+ + T C HR C +C++ + R+ CP C + VSK+ L P
Sbjct: 794 CPICLEALEDAVLTP-CAHRLCRECLLASWRNSTSGLCPVC-RNTVSKQELITAP 846
>At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger)
family protein very low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 692
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +2
Query: 212 IAVSPRSLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCXKK 379
+ +S S S C ICL+ +K+ + T EC H F CI + ++ GN+ CP C K
Sbjct: 59 LKLSRNSSKSSKTCSICLNKMKEGGGHALFTAECSHSFHFHCIASNVKHGNQVCPVCRAK 118
Query: 380 LVSKRSLRPDPNFDL 424
K P+FDL
Sbjct: 119 W--KEIPMQHPSFDL 131
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
L C C D K+ + TK C H FCN C+ + K+CPTC
Sbjct: 824 LKCKACNDRPKEVVITK-CYHLFCNPCVQKLTGTRQKKCPTC 864
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL-VSKRSLRPDPNFDLL 427
C +CL +L + TT C H FC C+ ++ GNK CP C + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 428 ISKIYPSRDEY 460
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL-VSKRSLRPDPNFDLL 427
C +CL +L + TT C H FC C+ ++ GNK CP C + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 428 ISKIYPSRDEY 460
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL-VSKRSLRPDPNFDLL 427
C +CL +L + TT C H FC C+ ++ GNK CP C + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 428 ISKIYPSRDEY 460
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL-VSKRSLRPDPNFDLL 427
C +CL +L + TT C H FC C+ ++ GNK CP C + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 428 ISKIYPSRDEY 460
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKR 394
L EL C ICL++ + TT C H FC C+ +A ++CP C + + + R
Sbjct: 718 LRDELSCAICLEICFEPSTTT-CGHSFCKKCLRSAADKCGRKCPKCRQLIGNGR 770
>At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 704
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +2
Query: 224 PRSLH---SELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCXKK 379
PRS+ S+ C ICL +K + T EC H F CI T ++ GN+ CP C K
Sbjct: 60 PRSMSKSSSKKTCAICLTAMKAGQGHAIFTAECSHSFHFQCITTNVKHGNQICPVCRAK 118
>At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 675
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 218 VSPRSLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCXKK 379
+S S S C ICL+ +K+ + T EC H F CI + ++ GN+ CP C K
Sbjct: 63 LSRSSSKSSKTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNVKHGNQVCPVCRAK 120
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 224 PRSLHSELMCPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCXK 376
P S + E+ CP+CL ++ K + K C+H F +CI L S + CP C +
Sbjct: 82 PESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLES-HATCPVCRR 134
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 230 SLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCXKK 379
S S+ C ICL+ +K+ + T EC H F CI + ++ GN+ CP C K
Sbjct: 68 SKSSKQTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNVKHGNQVCPVCRAK 121
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGN-KECPTCXKKLVSKRSLRPDPNFDLL 427
CPICL+ + T C HR C +C++T+ RS + CP C + ++ + L P +
Sbjct: 1040 CPICLESADDPVLTP-CAHRMCRECLLTSWRSPSCGLCPIC-RTILKRTELISCPTDSIF 1097
Query: 428 ISKIYPSRDEYEAHQELV--LAKLSMSHS-QASLVNS 529
+ + E EL+ L K+ S S + S+V S
Sbjct: 1098 RVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFS 1134
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 182 PQEVITDATEIAVSPRSLHS-ELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGN 352
P+ I I ++ + L S + CP+C D + K+ C H + +DCI+ L N
Sbjct: 162 PKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN 221
Query: 353 KECPTCXKKLVSKRS 397
CP C K+L S+ S
Sbjct: 222 S-CPVCRKELPSRGS 235
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 182 PQEVITDATEIAVSPRSLHS-ELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGN 352
P+ I I ++ + L S + CP+C D + K+ C H + +DCI+ L N
Sbjct: 162 PKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN 221
Query: 353 KECPTCXKKLVSKRS 397
CP C K+L S+ S
Sbjct: 222 S-CPVCRKELPSRGS 235
>At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCXKKLVSK 391
C ICLD+ K+ + T C H +C C+ L+ S KECP C ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCXKKLVSK 391
C ICLD+ K+ + T C H +C C+ L+ S KECP C ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCXKKLVSK 391
C ICLD+ K+ + T C H +C C+ L+ S KECP C ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +2
Query: 197 TDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-----C 361
T +I++ P H++ C ICL++ +T CLH FCN C +R ++ C
Sbjct: 124 TQLLQISIDPE--HAK--CSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLC 179
Query: 362 PTC 370
P C
Sbjct: 180 PQC 182
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +2
Query: 251 CPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICL ++K + T EC H F DCI + ++ GN+ CP C
Sbjct: 69 CAICLYEIRKEDGKAIFTAECSHSFHFDCITSNVKHGNRICPLC 112
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRP 406
+ L EL CP+CL +L + + C H FC+ C+ + + CP C K + R
Sbjct: 17 QKLELELKCPLCLKLLNRPVLL-PCDHVFCDSCVHKSSQV-ESGCPVCKSK--HPKKARR 72
Query: 407 DPNFDLLISKIYPS 448
D F + IY S
Sbjct: 73 DLRFMESVISIYKS 86
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRP 406
+ L EL CP+CL +L + + C H FC+ C+ + + CP C K + R
Sbjct: 17 QKLELELKCPLCLKLLNRPVLL-PCDHVFCDSCVHKSSQV-ESGCPVCKSK--HPKKARR 72
Query: 407 DPNFDLLISKIYPS 448
D F + IY S
Sbjct: 73 DLRFMESVISIYKS 86
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 179 TPQEVITDATEIA---VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG 349
T E +TD E+ V+ + CPIC+ + T+ C H FC CI+ L+
Sbjct: 589 TSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITR-CAHIFCRACILQTLQRS 647
Query: 350 NKECPTCXKKL 382
CP C L
Sbjct: 648 KPLCPLCRGSL 658
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCXKKLVSK 391
L CPICL L ++ + C H F DCI+T L+ N CP C K K
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKK-NPSCPICRTKAHGK 221
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 200 DATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTC 370
+A E + S L C +CLD + M KE C H+F +DC++ L + CP C
Sbjct: 208 EAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLEL-HSSCPVC 265
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
+L C +C + + +T C H FC C + GN+ C TC + K + P N
Sbjct: 106 DLNCSLCNQLPDRPVTIL-CGHNFCLKCFDKWIDQGNQICATCRSTIPDKMAANPRVNSS 164
Query: 422 LL 427
L+
Sbjct: 165 LV 166
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 245 LMCPICL--DMLKKTMTTKECLHRFCNDCII 331
+ C +C+ D+ MT EC HRFCNDC I
Sbjct: 119 MKCDVCMEDDLPSNVMTRMECGHRFCNDCWI 149
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P79051 DNA
repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 833
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCXKKLVSKRSLRPD 409
SE C +C D + + T C H FC C+I S G CPTC K L + + D
Sbjct: 575 SEQECGLCHDPAEDYVVTS-CAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKAD 631
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHR-FCNDCIITALRSGNKECPTCXKKLVSKRSLRPD 409
L EL CP+C +++K T +C ++ FC+ CI + S K C + V L P+
Sbjct: 289 LPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIIS--KSMCVCGRSDVLADDLLPN 346
Query: 410 PNFDLLISKIYPSRDEYEAHQELV--LAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXK 583
I++I + ++ + V + L + S T + + + +P S
Sbjct: 347 KTLRDTINRILEAGNDSTENVGSVGHIPDLESARCPPPKALSPTTSVASKGEKKPVLSNN 406
Query: 584 NHDESSNASNSNGNVQTAQNGS 649
N + A + +A S
Sbjct: 407 NDASTLKAPMEVAEITSAPRAS 428
>At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 472
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 251 CPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
C +CL + K +C H F DCI T L S + CP C L+S S DP
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLS-HSTCPLCRSSLLSDLSSHQDPRSS 192
Query: 422 LLI 430
L+
Sbjct: 193 FLL 195
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
C +CL +LK+ +E C H F DC+ T L + + CP C ++ + L P+P
Sbjct: 108 CAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCST-CPVCRTEVEPRPRLEPEP 163
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Frame = +2
Query: 242 ELMCPICLDMLKK--------TMTTKECLHRFCNDCIITALRSGNKECPTC 370
EL CPICL+ LKK + +C H F +CI + LR +++CP C
Sbjct: 89 ELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRE-SQDCPIC 138
>At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 185 QEVITDATEIAVSPRSLHSEL-MCPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNK 355
+ I + ++P+ L +++ C +C++ ++ T C H + DCI+ LR N
Sbjct: 201 EPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRL-NN 259
Query: 356 ECPTCXKKL 382
CP C + L
Sbjct: 260 SCPICRRDL 268
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 35.5 bits (78), Expect = 0.031
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 245 LMCPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPN 415
L C +CL L K C H F +CI + L+S N CP C K++ K+S R P
Sbjct: 86 LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQS-NSTCPICRKRVCLKQS-RTRPE 143
Query: 416 FDLLISKIYPSRDEYEAHQE 475
+ D+ H E
Sbjct: 144 LGGRDKSFNQNHDQTSEHHE 163
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 245 LMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCXKKLVS 388
L C +CLD +K KE C H+F CI+ L + CP C +L S
Sbjct: 257 LQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLEL-HSSCPVCRFELPS 305
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRP 406
+ L C ICLD K KE C H+F CI+ L + CP C +L +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL-HSSCPVCRYELPPDDETKV 293
Query: 407 DP 412
+P
Sbjct: 294 NP 295
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRP 406
+ L C ICLD K KE C H+F CI+ L + CP C +L +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL-HSSCPVCRYELPPDDETKV 293
Query: 407 DP 412
+P
Sbjct: 294 NP 295
>At2g15260.1 68415.m01740 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +2
Query: 248 MCPICLDML------KKTMTTKECLHRFCNDCIITALRS-GNKECPTC 370
+C IC L ++T+ T +C+H+F DCI +A + G ECP C
Sbjct: 122 LCSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNC 169
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 364
+C IC ++ K C H FCN CI L N +CP
Sbjct: 918 ICGIC-NVAPKDAVVSLCGHVFCNQCICECLTRDNNQCP 955
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 167 ELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCII 331
E+ + E+ + + + P + EL CPICL + + + C H FC C++
Sbjct: 1535 EVQKMVNELAREKSALGEKPDEI--ELECPICLSEVDDGYSLEGCSHLFCKACLL 1587
>At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 196
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 227 RSLHSELMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTC 370
R + + C ICLD KK T+ C H+F + C++ L + N CP C
Sbjct: 142 RRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDT-NVYCPYC 190
>At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 34.3 bits (75), Expect = 0.071
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICLD L++T K C H +C CI+ + KE PTC
Sbjct: 43 CAICLDTIPLQETAMVKGCEHAYCVTCILR--WASYKEKPTC 82
>At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 213
Score = 34.3 bits (75), Expect = 0.071
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE-----CLHRFCNDCIITALRSGNKECPTCXKKLVSKRS 397
C ICL+ L + + + C H F DCI+ LR + CPTC + ++R+
Sbjct: 155 CIICLEELASSGSERRIMKLLCSHSFHKDCILPWLRC-KRSCPTCRDDIHNRRA 207
>At2g47700.1 68415.m05957 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type(RING finger)
Length = 358
Score = 34.3 bits (75), Expect = 0.071
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Frame = +2
Query: 242 ELMCPICLDML----KKTMTTKECLHRFCNDCIITALR-SGNKECPTC-----XKKLVSK 391
E+ C ICL+ + ++ +C H+F DCI +A G +CP C + L +
Sbjct: 35 EVSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYAN 94
Query: 392 RSLRPDPNFDL 424
S RP P F +
Sbjct: 95 GSTRPFPEFSM 105
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 34.3 bits (75), Expect = 0.071
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 215 AVSPRSLHSELMCPICLDMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTCXKKL 382
A++ + L C +CLD + K C H+F +DC++ L + CP C +L
Sbjct: 211 ALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLEL-HSSCPVCRYQL 267
>At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 155
Score = 34.3 bits (75), Expect = 0.071
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 251 CPICLDMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTCXKKLVS 388
C +CL LK+ + EC H F C+ L N CP C LVS
Sbjct: 86 CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVS 133
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 185 QEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKE 358
Q I + ++ L E +C IC + + KE CLH + + CI++ L N
Sbjct: 116 QSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHN-T 174
Query: 359 CPTC 370
CP C
Sbjct: 175 CPIC 178
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 167 ELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCII 331
E+ + E+ + + + P + E+ CPICL + + + C H FC C++
Sbjct: 1538 EVQKMVNELAREKSALGEKPDEI--EVECPICLSEVDDGYSLEGCSHLFCKACLL 1590
>At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 493
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 194 ITDATEIAVSPRSLHSELMCPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPT 367
+ + + ++ + L+C IC ++ L+ T CLH + CI+ L S CP
Sbjct: 331 VRNLPRVIIAEEHVMKGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPWL-SARNSCPL 389
Query: 368 CXKKL 382
C +L
Sbjct: 390 CRYEL 394
>At4g13490.1 68417.m02105 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 251 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNK-ECPTC 370
C +CL+ L ++T+ C H+F DC+ ++ NK ECP C
Sbjct: 22 CAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCC 67
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +2
Query: 248 MCPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL-VSKRSLRPDPN 415
+C ICL DM + T C H FC CI+ + ++ CP C ++ + R P
Sbjct: 412 VCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESR-CPLCKQRFRTISKPARSTPG 470
Query: 416 FDLLISKI-YPSRDE-YEAHQE 475
DL I P RD+ Y+ +E
Sbjct: 471 VDLREVVIPVPERDQVYQPTEE 492
>At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 180
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 221 SPRSLHSELMCPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
S S S L C IC + ++ ++ C H + NDCII L S N CP C +L
Sbjct: 86 SASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHN-SCPLCRVEL 140
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICL+ K T+ CLH+F DCI L +K CP C
Sbjct: 589 CVICLETPKIGDTIRHLPCLHKFHKDCIDPWL-GRSKSCPVC 629
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 131 PSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML--KKTMTTKECL 304
P LSLY ++ P + T+ + + C +CL+ K+T+ C
Sbjct: 107 PKSTLLRSLSLYYRNKNPGSESSRNTQ---NLSGEEDDKRCSVCLEDFEPKETVMLTPCK 163
Query: 305 HRFCNDCIITALRSGNKECPTC 370
H F +CI+ L++ +CP C
Sbjct: 164 HMFHEECIVPWLKT-KGQCPVC 184
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P31244 DNA
repair protein RAD16 {Saccharomyces cerevisiae};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 638
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 364
S C +C D K + T C H FC +C+ + N CP
Sbjct: 391 SSTTCSVCSDPPKDPVVTL-CGHVFCYECVSVNINGDNNTCP 431
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCXK 376
C ICL+ L + E C H F C+ L GN CP C K
Sbjct: 156 CAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIRGNNSCPLCRK 200
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 194 ITDATEIAVSPRSLHSELMCPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPT 367
+ D T+ + + + CPICL+ + +C H F CI+ A ++ CP
Sbjct: 85 VDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLACIL-AWMERSEACPV 143
Query: 368 CXKKLVSKRS 397
C K+LV S
Sbjct: 144 CDKELVLTES 153
>At1g71980.1 68414.m08320 protease-associated zinc finger
(C3HC4-type RING finger) family protein identical to
ReMembR-H2 protein JR702 [Arabidopsis thaliana]
gi|6942149|gb|AAF32326; contains Pfam domain, PF02225:
protease-associated (PA) domain and Pfam domain,
PF00097: Zinc finger, C3HC4 type (RING finger);
identical to cDNA ReMembR-H2 protein JR702 mRNA, partial
cds GI:6942148
Length = 448
Score = 32.7 bits (71), Expect = 0.22
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 CPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFDL 424
C ICL+ + + C H+F C+ + L S CP C + + P
Sbjct: 232 CAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASESTP 291
Query: 425 LISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSIT 535
L+S S H + + L + S SL SI+
Sbjct: 292 LLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSIS 328
>At5g16910.1 68418.m01982 cellulose synthase family protein similar
to gi:2827143 cellulose synthase catalytic subunit,
Arabidopsis thaliana, gi:9622886 cellulose synthase-7
from Zea mays
Length = 1145
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 296 ECLHRFCNDCIITALRSGNKECPTC 370
EC + C DC I A+++G CP C
Sbjct: 150 ECDFKICRDCFIDAVKTGGGICPGC 174
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCI 328
CPICL + C H+FC +CI
Sbjct: 22 CPICLGQFLRESYLDTCFHKFCFNCI 47
>At1g02730.1 68414.m00226 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-4 [gi:9622880]
from Zea mays
Length = 1181
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 296 ECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
EC R C DC + SG CP C + R + DP
Sbjct: 177 ECGFRICRDCYFDCITSGGGNCPGCKEPY---RDINDDP 212
>At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICL L++T K C H +C CI+ + KE PTC
Sbjct: 46 CAICLSEIPLQETAMVKGCEHTYCVTCILR--WASCKESPTC 85
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 173 HRTPQEVITDATEIAVSPRSLH--SELMCPICLDMLKKTMTTK------ECLHRFCNDCI 328
H + V+ +A E A RS+ S C IC D ++ T++++ EC C C
Sbjct: 12 HNRNEFVLINADESA-RIRSVQELSGQTCQICGDEIELTVSSELFVACNECAFPVCRPCY 70
Query: 329 ITALRSGNKECPTC 370
R GN+ CP C
Sbjct: 71 EYERREGNQACPQC 84
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 239 SELMCPICL-DMLKKTMTTKECLHRFCNDC 325
S++ C +C+ D+ MT +C H FCN+C
Sbjct: 119 SQMSCDVCMEDLPGDHMTRMDCGHCFCNNC 148
>At3g61790.1 68416.m06933 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 326
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
A+ + + S+H L CP+C + + + H C+ C R N+ CPTC ++L
Sbjct: 47 ASGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTC---KARVHNR-CPTCRQEL 102
Query: 383 VSKRSL 400
R L
Sbjct: 103 GDIRCL 108
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Frame = +2
Query: 230 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--------NKECPTCXKKLV 385
S S + CPICL+ T C H FC CI+ L +G K CP C ++
Sbjct: 238 STPSPVQCPICLEYPLCPQITS-CGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCF-VMI 295
Query: 386 SKRSL 400
S R L
Sbjct: 296 SPREL 300
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 31.9 bits (69), Expect = 0.38
Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Frame = +2
Query: 182 PQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI---ITALRSGN 352
PQ+ E + +++ C IC + C HRFC CI L S
Sbjct: 277 PQDDDESTREETEATEKAPAQVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSER 336
Query: 353 KE--CPTCXKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVN 526
K+ CP C ++ + + D KIY + +L L Q +N
Sbjct: 337 KKTTCPLCKSNFITITKIEDADSSD---QKIYSQTVPDLSSTNNILVVLPEEEEQRQTLN 393
Query: 527 SIT 535
+T
Sbjct: 394 PLT 396
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 239 SELMCPICLDMLKK---TMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPD 409
+E C ICL ++ ++C H F CI L S CPTC + S+ S P
Sbjct: 103 AEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWL-STRSSCPTCRTSIFSQHSETPS 161
Query: 410 PNFD 421
+ +
Sbjct: 162 SHIN 165
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 251 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFD 421
C +CL K C H F +CI T L+S N CP C L S +P FD
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQS-NSTCPLCRGTLFSPGFSMENPMFD 201
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 242 ELMCPICLDMLK-KTMTTKECLHRFCNDCI 328
EL CP+C ++++ + +K CL +C+ CI
Sbjct: 203 ELKCPLCKEVMRDAALASKCCLKSYCDKCI 232
>At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 276
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 251 CPICLDML---KKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLV 385
CP+C + L K +C H DC + CP C K +V
Sbjct: 159 CPVCYEYLFDSVKAAHVMKCGHTMHMDCFEQMINENQYRCPICAKSMV 206
>At3g45470.1 68416.m04910 zinc finger protein-related contains low
similarity to Swiss-Prot:O76924 ariadne-2 protein
(Ari-2) [Drosophila melanogaster]
Length = 222
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCI--ITALRSGNKECPTC 370
C ICL+ K + +CLHR C C+ + ++ N PTC
Sbjct: 6 CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPTC 49
>At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 191
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLD---MLKKTMTTKECLHRFCNDCI 328
A E V S+H +C IC D ++ + C H+FC DC+
Sbjct: 43 AMEAGVPEISIHMPAICRICFDEDVKAEQMYSVALCGHQFCVDCV 87
>At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 211
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCXK 376
C ICL+ L ++ E C H F C+ L N CP C K
Sbjct: 160 CAICLENLLRSEDYCEMPTCSHYFHEPCLTEWLTRDNNSCPLCRK 204
>At3g14250.1 68416.m01804 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam:PF01485 IBR
domain
Length = 308
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 167 ELHRTPQEVITDATEIAVSPRSLH-SELMCPICLDMLKKT---MTTKECLHRFCNDCIIT 334
++HR ++ EI + S +C IC+D + T C H +C DC +
Sbjct: 66 QVHRNLVTLVKQEPEIKAENEPMEPSRRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVR 125
Query: 335 ALRSGNKE 358
+ + KE
Sbjct: 126 YVATKIKE 133
>At1g60190.1 68414.m06780 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 686
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 RSLH-SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVS 388
RSL+ +L CPI L+++ + E H + I SGN CP K LVS
Sbjct: 275 RSLNVDDLRCPISLEIMSDPVVL-ESGHTYDRSSITKWFASGNITCPKTGKTLVS 328
>At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 642
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 113 KMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 292
K P+ K+ + E + ++ I A + R L E C IC +L +TT
Sbjct: 470 KWMKPPPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLL-KEFKCQICQQVLTLPVTT 528
Query: 293 KECLHRFCNDCI 328
C H FC C+
Sbjct: 529 P-CAHNFCKACL 539
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 113 KMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 292
K P+ K+ + E + ++ I A + R L E C IC +L +TT
Sbjct: 473 KWMKPPPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLL-KEFKCQICQQVLTLPVTT 531
Query: 293 KECLHRFCNDCI 328
C H FC C+
Sbjct: 532 P-CAHNFCKACL 542
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to transcription factor RUSH-1alpha
[Oryctolagus cuniculus] GI:1655930; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 981
Score = 31.5 bits (68), Expect = 0.50
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPT--CXKKLVSKRSLRP 406
L S +C +C D + + T C H FC C+ + CP C ++L
Sbjct: 673 LESSPICCVCHDPPEDPVVTL-CGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSK 731
Query: 407 DPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKN 586
+ + S E +H + V S S+ V I + + Q + S +N
Sbjct: 732 STLRSCVADDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDILQSLSNQGTS---NSTQN 788
Query: 587 HDESSNASNSN 619
+S++ N
Sbjct: 789 GQMASSSQQPN 799
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
L E C IC ++L +TT C H FC C+
Sbjct: 489 LLKEFSCQICREVLSLPVTTP-CAHNFCKACL 519
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLR 403
+C IC + + + + C H FC DC ++ + CP C + LV L+
Sbjct: 364 LCAICQEKMHTPILLR-CKHMFCEDC-VSEWFERERTCPLC-RALVKPADLK 412
>At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCXKKLVS 388
+E C ICL + T + C H F CI L S + CPTC + S
Sbjct: 98 NEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFS 150
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 251 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
C ICL+ L + +T C H F N C++ L+ N CP C +L
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKN-TCPLCRTEL 69
>At4g09560.1 68417.m01571 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 431
Score = 31.1 bits (67), Expect = 0.66
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Frame = +2
Query: 239 SELMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDP 412
+ ++C ICL+ +K + C H+F C+ L CP C + S + +P
Sbjct: 213 TSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPS 272
Query: 413 NFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKNHD 592
+S+ PS + +L+ S + Q+S + + I++ + P S + H
Sbjct: 273 EHTPFLSRT-PSMTPTSS---FLLSSSSTTPLQSS--HELPISIRV-DPSLPSTSMQPHT 325
Query: 593 ESSNASNSNGNVQTAQNGSN 652
S+S + + QNGSN
Sbjct: 326 VPMYLSHSRSHT-SFQNGSN 344
>At2g31510.1 68415.m03850 IBR domain-containing protein /
ARIADNE-like protein ARI7 (ARI7) identical to
ARIADNE-like protein ARI7 [Arabidopsis thaliana]
GI:29125028; contains similarity to Swiss-Prot:Q94981
ariadne-1 protein (Ari-1) [Drosophila melanogaster];
contains Pfam profile PF01485: IBR domain
Length = 562
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 209 EIAVSPRSLHSELMCPICLDML-KKTMTTKECLHRFCNDCIITALRSGNKECPTC 370
E V P S SEL C IC D + + + C H FC C + + + P C
Sbjct: 123 ESHVVPPSDDSELTCGICFDSYPPEKIASVSCGHPFCTTCWTGYISTTINDGPGC 177
>At2g25380.1 68415.m03039 zinc finger protein-related very low
similarity to SP|O95376 Ariadne-2 protein homolog
(ARI-2) (Triad1 protein) {Homo sapiens}; contains Pfam
profile PF01485: IBR (In Between Ring fingers) domain
Length = 350
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 164 YELHRTPQEVITDATEIAVSPRSLHSELMCPICLD--MLKKTMTTKECLHRFCNDCI-IT 334
Y L R +E+++ ++ + V + E C ICL+ + + T +CLHR+C C+ T
Sbjct: 176 YRLAR--EEIVSKSSSVNV--KEAQGET-CVICLEETVADRMFFTDKCLHRYCFSCVKQT 230
Query: 335 ALRSGNKECPTC 370
++ C C
Sbjct: 231 CVKCNGLFCIDC 242
>At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1084
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +2
Query: 251 CPICLDMLKKTM------TTKECLHRFCNDCIITALRSGNKECPTC 370
C IC D ++ T+ EC C C R GN+ CP C
Sbjct: 39 CQICRDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQC 84
>At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 145
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 242 ELMCPICL-DMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTC 370
E+ CPICL + + T C H F +CI L G+ CP C
Sbjct: 59 EICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLC 104
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 227 RSLHSELMCPICLDML---KKTMTTK-ECLHRFCNDCIITALRSGNKECPTCXKKLV 385
+SL++E C ICL L KT T+ C H F N C++ L N CP +L+
Sbjct: 146 KSLNAE-SCSICLQSLVSSSKTAPTRMSCSHVFHNGCLVEWLNRKN-TCPMFHMQLI 200
>At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 348
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +2
Query: 173 HRTPQEVITDATEIAVSPR---SLHSELMCPICLD---MLKKTMTTKECLHRFCNDCI 328
++ +E I I+V+P + C ICLD + +C HRFC+DC+
Sbjct: 71 YKLARETIVSEISISVNPPRQPKATRKTTCKICLDDDINENQMFCVGKCRHRFCSDCM 128
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 98 LEYI-GKMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 274
L Y+ G M S + ++++ +LS +H T +D E S L + CPIC ++L
Sbjct: 1280 LRYLKGLMKSKQKQESESPDLSS-PIHETVDA--SDPAE-QESENLLKRDEACPICHEIL 1335
Query: 275 KKTMTTKECLHRFCNDC 325
+ +C H C +C
Sbjct: 1336 RNQKMVFQCGHSTCCNC 1352
>At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 660
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 185 QEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
+E I A + R L E C IC ++ +TT C H FC C+
Sbjct: 507 REAIKSANPNTMRARLL-KEFKCQICQKVMTNPVTTP-CAHNFCKACL 552
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 269 MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFDLLI 430
ML + + C H C C + + G++ C TC + V S+ +P +L I
Sbjct: 163 MLVWFLESTPCGHNACLKCFLKWMGQGHRSCGTC--RSVIPESMVTNPRINLSI 214
>At1g15810.1 68414.m01897 ribosomal protein S15 family protein
contains similarity to ribosomal protein S15
Length = 419
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 494 SMSHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQN-GSN 652
S S S +S + I +KL+ QN+ ++ K D S S + G+ +QN G N
Sbjct: 47 SPSPSDSSPIFDIKNTLKLKLQNQQEQGRKPFDRSDAQSQNRGSTSFSQNLGKN 100
>At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 508
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 12/58 (20%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCII----TALRS--------GNKECPTCXKKLVS 388
C +CL+ K T+ C H FC +C + T++ S G+ CP C +VS
Sbjct: 321 CAVCLER-KCTVAADGCAHEFCTNCALYLSTTSITSSKTSNVTPGSVPCPLCRNGIVS 377
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 251 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKL 382
C ICL+ L + +T C H F N C++ L+ N CP C ++
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKN-TCPLCRTEI 204
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITA 337
L +L C ICL+ + K C H FCN C +A
Sbjct: 225 LEYDLTCAICLETVFNPYALK-CGHIFCNSCACSA 258
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +2
Query: 251 CPICLDMLKKT------MTTKECLHRFCNDCIITALRSGNKECPTC 370
C IC D ++ T + EC C C R GN+ CP C
Sbjct: 39 CKICRDEIELTDNGEPFIACNECAFPTCRPCYEYERREGNQACPQC 84
>At2g45135.1 68415.m05617 expressed protein ; expression supported
by MPSS
Length = 304
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITAL-RSGNKE---CPTCXKKLV 385
C CL + + C+HRFC CI+ R +E CP +K++
Sbjct: 179 CRRCLSVSSPVVIADPCMHRFCVKCILFLWGRQKRREPCVCPLDGEKMI 227
>At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 147
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLV 385
C +CL LK + + +C H F C+ L+ N CP C L+
Sbjct: 74 CIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
L E C IC +L +TT C H FC C+
Sbjct: 492 LLKEFSCQICRKVLSLPVTTP-CAHNFCKACL 522
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 233 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 328
L E C IC +L +TT C H FC C+
Sbjct: 492 LLKEFSCQICRKVLSLPVTTP-CAHNFCKACL 522
>At1g17145.1 68414.m02090 expressed protein
Length = 335
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 221 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPT 367
+P S H CPIC ++ C+ C +C + ++S N PT
Sbjct: 53 TPSSHHDLEECPICFLYYPSLNRSRCCMKSICTECFL-RMKSPNSAQPT 100
>At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 316
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCI 328
CP+C + + + C HRFC DCI
Sbjct: 157 CPVCYEHVTSDEKFEVPGCFHRFCFDCI 184
>At2g16090.1 68415.m01845 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 593
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 239 SELMCPICL-DMLKKTMTTKECLHRFCNDC 325
S + C IC+ D+ +T +C H FCN+C
Sbjct: 120 SMMSCDICVEDVPGYQLTRMDCGHSFCNNC 149
>At1g78280.1 68414.m09122 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam PF00646: F-box
domain; contains Pfam PF02373: jmjC domain; similar to
apoptotic cell clearance receptor PtdSerR (GI:11037740)
[Mus musculus]
Length = 916
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 497 CLV*PEPVLGEPRIRPYWDISWI*AGQSWGPVEENVWTLISXY 369
C++ E VLG I WD + +SW VE+ VW+L++ Y
Sbjct: 878 CILHEENVLGS--IFSIWDE--LRTAESWEQVEQTVWSLLNTY 916
>At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 164 YELHRTPQEVITDATEIAVSPRSLHSELM--CPICLDMLKKTMTTKECLHRFCNDCIITA 337
+E R P + + ++ ++P+ M C +CL + C H F DCI
Sbjct: 84 FEAKRVPGPLYI-SYDVTLTPQIFEEPDMETCGLCLLEEQHLFDMPNCAHVFHGDCIDKW 142
Query: 338 LRSGNKECPTCXKKLV 385
L + N CP C +++
Sbjct: 143 LSTSN-NCPLCGVEIM 157
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 364
+C IC D + + + C H FC CI L + CP
Sbjct: 992 ICGICNDAPEDAVASV-CGHVFCKQCIYERLTGDSNHCP 1029
>At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1069
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = +2
Query: 173 HRTPQEVITDATEIAVSPRSLH--SELMCPICLDMLKKTM------TTKECLHRFCNDCI 328
H + V+ +A E A RS+ S C IC D ++ ++ EC C C
Sbjct: 12 HNRNEFVLINADESA-RIRSVEELSGQTCQICGDEIELSVDGESFVACNECAFPVCRPCY 70
Query: 329 ITALRSGNKECPTC 370
R GN+ CP C
Sbjct: 71 EYERREGNQSCPQC 84
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +2
Query: 158 SLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITA 337
SLY H PQ ++ E + P S+ S+ C + +D LH F + I
Sbjct: 125 SLYIAH--PQSLV-HLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 338 LRSGNKECPTCXKKLVSKRSL 400
+ G K K+LVS RS+
Sbjct: 182 IDLGGKAFTNYLKELVSYRSI 202
>At2g25360.1 68415.m03035 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 373
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDML---KKTMTTKECLHRFCNDCI 328
A E VS + +E+ C IC + + TT++C+HR C C+
Sbjct: 75 AREAIVSRDDVKAEI-CSICFEETEGERMFFTTEKCVHRHCFPCV 118
>At1g22510.1 68414.m02812 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK----ECPTCXKKL 382
+C IC + C H FC +CI+ R G+ +CP C + +
Sbjct: 9 LCSICHGHFNAPCQSN-CSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPI 56
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 242 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 364
E CPI +D++K + + + I T + SGNK CP
Sbjct: 34 EFQCPISIDLMKDPVIISTGI-TYDRVSIETWINSGNKTCP 73
>At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 532
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 251 CPICL-DMLKKTMTTKECLHRFCNDCIIT 334
C IC D + M + +C H+FC+ C+ T
Sbjct: 207 CSICCEDRQSEMMLSLKCTHKFCSHCMKT 235
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKK 379
C IC+D++ C H FC +CI N CP C ++
Sbjct: 31 CGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNL-CPLCQRE 72
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLVSKRSLRPDPNFDLLI 430
C +C +L ++ C H FC C+ + K+CP C + S+ D N ++
Sbjct: 108 CMLCQALLYESSRCVPCTHVFCKVCL-----TRFKDCPLCGADI---ESIEVDENLQKMV 159
Query: 431 SK 436
+
Sbjct: 160 DQ 161
>At1g72175.1 68414.m08345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 248 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK----ECPTCXKKL 382
+C IC C H FC +CI+ R G+ +CP C + +
Sbjct: 9 LCSICHSHFTAPCQAN-CSHWFCGNCIMLVWRHGSTLQPCKCPLCRRHI 56
>At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 174
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 251 CPICL-DMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTC 370
C ICL DM + +E C H F NDCI L N CP C
Sbjct: 116 CAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKWLGHSNL-CPLC 158
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 239 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPT--CXKKL 382
S +C C + +K + T C H FC +C++ + CP C ++L
Sbjct: 747 SSAICYECNEPPEKPVVTL-CGHIFCYECVLEYITGDENTCPVPRCKQQL 795
>At3g10380.1 68416.m01244 exocyst complex component-related
identical to Probable exocyst complex component Sec8
(Swiss-Prot:Q93YU5) [Arabidopsis thaliana]; weak
similarity to Exocyst complex component Sec8 (rSec8)
(Swiss-Prot:Q62824) [Rattus norvegicus]
Length = 1053
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 521 VNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQNGSN 652
V +T G + N S HDE + + TA+NG++
Sbjct: 259 VRGLTNGSYRTASNDESSSFDGHDEEDSVEHDESTADTARNGTD 302
>At1g23000.1 68414.m02874 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains PF00403 Heavy-metal-associated
domain
Length = 358
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 461 EAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQTAQ 640
EA++ L L+ + + VN GI+ Q Q P + N + N +NSNG +
Sbjct: 213 EANEIGALMGLAGFNGATNAVNHPPNGIQQQLQAPPLNNV-NGVTNHNLTNSNGGMMMNM 271
Query: 641 NGSN 652
NG N
Sbjct: 272 NGYN 275
>At5g66160.2 68418.m08334 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 290
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICL+ + +++ C H F +CI + L CP C
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVC 273
>At5g66160.1 68418.m08335 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 310
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTC 370
C ICL+ + +++ C H F +CI + L CP C
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVC 273
>At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 559
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 407 DPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKN 586
DP ++L S +Y+A E + A+ S S + + S+T G QS P R+
Sbjct: 140 DPEPEILPPVEENSPSDYDAVMEAIRARSKNSMSPTTSLESVTIG---QSSYHPVRAVSM 196
Query: 587 HDESSNASNS 616
S+ +S+S
Sbjct: 197 FSSSTTSSSS 206
>At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger)
family protein similar to SP:O54965 RING finger protein
13 {Mus musculus} RING zinc finger protein
Length = 234
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 248 MCPIC-LDMLK-KTMTTKECLHRFCNDCIITALRSGNKECPTCXKKLV 385
MC IC D ++ +T C H++ DCI L++ +K C C ++++
Sbjct: 187 MCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQN-SKLCCVCQREVI 233
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 683
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Frame = +2
Query: 251 CPICLDMLKK----TMTTKECLHRFCNDCIIT-ALRSGNK--ECPTCXKKLV 385
C ICL +K + T EC H F C+ + A + N+ CP C L+
Sbjct: 130 CGICLQSVKSGQGTAIFTAECSHTFHFPCVTSRAAANHNRLASCPVCGSSLL 181
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/67 (20%), Positives = 31/67 (46%)
Frame = +2
Query: 452 DEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGNVQ 631
D + +++ + + ++ S+ +V+ + +K + + S K DESS +S Q
Sbjct: 284 DTEDQEEDVEIYRENVRSSEKKVVDQSAKRLKSRKEASQMHSRKKRDESSTGVDSRYQKQ 343
Query: 632 TAQNGSN 652
+ G N
Sbjct: 344 IFEEGEN 350
>At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 545
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 182 PQEVITDATEIAVSPRSLHSE-LMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGN 352
P +V+ D I + +S + C ICL ++ ++ T C H F C+ L+ +
Sbjct: 467 PNDVV-DLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIH 525
Query: 353 KECPTC 370
+ CP C
Sbjct: 526 RVCPLC 531
>At5g05170.1 68418.m00550 cellulose synthase, catalytic subunit
(Ath-B) nearly identical to gi:2827143, cellulose
synthase, catalytic subunit (Ath-B)
Length = 1065
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE------CLHRFCNDCIITALRSGNKECPTC 370
C IC D + KT+ C C C + GN+ CP C
Sbjct: 20 CQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQSCPQC 65
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 203 ATEIAVSPRSLHSELMCPICLDML---KKTMTTKECLHRFCNDCI 328
A E VS S+ C IC + + +K + C H+FC +C+
Sbjct: 139 AMETVVSEISICMPATCSICFNNVLEAEKMFSVAICGHQFCVECV 183
>At3g19270.1 68416.m02444 cytochrome P450 family protein similar to
Cytochrome P450 85 (SP:Q43147) {Lycopersicon
esculentum};
Length = 468
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = -2
Query: 399 RERLDTNFFXQVGHSLLPDLKAVIIQSLQNLWRHSFVVIVFLSISK 262
R+ + ++F+ + L+PD++ + + SLQ+ W + +V + + K
Sbjct: 128 RKLVQSSFYPETIRKLIPDIEHIALSSLQS-WANMPIVSTYQEMKK 172
>At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF01485:IBR domain
Length = 384
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Frame = +2
Query: 224 PRSLHSELMCPICLDM-LKKTMT--TKECLHRFCNDCI-----ITALRSGNKECPT--CX 373
P H + C IC D + M +C H FC++C+ ++ L+ CP+ C
Sbjct: 144 PALFHPKKTCTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQGSLITCPSYRCK 203
Query: 374 KKL 382
KL
Sbjct: 204 SKL 206
>At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 198
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCXK 376
C ICL+ + ++ + C H + C+ + N CP C K
Sbjct: 150 CAICLENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCRK 194
>At1g79810.2 68414.m09319 Pex2/Pex12 N-terminal domain-containing
protein / zinc finger (C3HC4-type RING finger) family
protein contains Pfam profiles PF00097: zinc finger
C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino
terminal region
Length = 282
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCXKKLVS 388
CPIC C HR+C CI T S + C C + +V+
Sbjct: 226 CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 272
>At1g79810.1 68414.m09318 Pex2/Pex12 N-terminal domain-containing
protein / zinc finger (C3HC4-type RING finger) family
protein contains Pfam profiles PF00097: zinc finger
C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino
terminal region
Length = 333
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 251 CPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCXKKLVS 388
CPIC C HR+C CI T S + C C + +V+
Sbjct: 277 CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 323
>At1g58100.1 68414.m06585 TCP family transcription factor, putative
similar to auxin-induced basic helix-loop-helix
transcription factor GI:5731257 from [Gossypium
hirsutum]
Length = 401
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 479 VLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSXKNHDESSNASNSNGN 625
+LA L+ ++S+ N+ E +++ ++ +HD+ S NSN +
Sbjct: 352 MLAALNSAYSRGGNANANAEQANNAVEHQEKQQQSDHDDDSREENSNSS 400
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,223
Number of Sequences: 28952
Number of extensions: 261666
Number of successful extensions: 1124
Number of sequences better than 10.0: 147
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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