Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_G23
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 84 1e-15
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 82 6e-15
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 81 8e-15
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 73 3e-12
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_Q8TJC7 Cluster: Rhomboid protein; n=3; Methanosarcina|R... 39 0.042
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 39 0.056
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 37 0.22
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 33 2.1
UniRef50_A6X4J5 Cluster: Polysaccharide pyruvyl transferase prec... 33 3.7
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 31 8.5
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 83.8 bits (198), Expect = 1e-15
Identities = 42/105 (40%), Positives = 56/105 (53%)
Frame = +3
Query: 48 MVNVPKQRRTYXXXXXXXXXXXAITVQKVQGKARCPALXDVMIVNSRAYGGQSKPIFXXX 227
MVNVPK RRT+ +T K +++ +GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 228 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXXRKGQMIQF 362
IVLR+EC +CK + Q+ +KRCKHFELGG +GQ+IQF
Sbjct: 61 AKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 81.8 bits (193), Expect = 6e-15
Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 48 MVNVPKQRRTYXXXXXXXXXXXAITVQKVQGKARCPALXDVMIVNSRA-YGGQSKPIFXX 224
MVNVPK RRT+ +K GK A ++ YGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKK--GKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58
Query: 225 XXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDXXRKGQMIQF 362
IVLRLEC + C+ + +A+KRCKHFELGGD RKGQ+IQF
Sbjct: 59 KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 81.4 bits (192), Expect = 8e-15
Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 48 MVNVPKQRRTYXXXXXXXXXXXAITVQKVQGKARCPALXDVMIVNSRA-YGGQSKPIFXX 224
MVNVPK RRT+ +K GK A ++ YGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKK--GKDSLYAQGRRRYDRKQSGYGGQTKPIFRK 58
Query: 225 XXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDXXRKGQMIQF 362
IVLRLEC + C+ + +A+KRCKHFELGGD RKGQ+IQF
Sbjct: 59 KAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 72.9 bits (171), Expect = 3e-12
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +3
Query: 51 VNVPKQRRTYXXXXXXXXXXXAITVQKVQGKARCPALXDVMIVNSRA-YGGQSKPIFXXX 227
VNVPK ++TY Q +GK A ++ YGGQ+KP+F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 228 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDXXRKG 347
IVLRL+C CK SQ +KRCKHFE+GGD KG
Sbjct: 108 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 246 IVLRLECADCKVRSQVALKRCKHFELGGDXXRKG 347
IVL+L+C CK SQ +KRCKHFE+GGD KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q8TJC7 Cluster: Rhomboid protein; n=3; Methanosarcina|Rep:
Rhomboid protein - Methanosarcina acetivorans
Length = 226
Score = 39.1 bits (87), Expect = 0.042
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 247 IFLVVFAFFLKMGLD*PP*ALLFTIITSXSAGQRAFPWTFCTVIALCT-LWHLHFLQYVL 71
IFL V +FFL+M P L + A PWT T I L T LWHL F VL
Sbjct: 35 IFLCVISFFLEMLPGIGP--LYISAFQFDPGSLLARPWTLVTYIFLHTGLWHLFFNMLVL 92
Query: 70 RCFGT 56
FGT
Sbjct: 93 YFFGT 97
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 38.7 bits (86), Expect = 0.056
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1
Query: 190 LTVVSPNPSSKRRQKPLRKLCSVLSVPIAR*DHRLH*RDASTLSSVVT 333
+TVV P+ SS RR +P R+L SV S AR DAST SSVVT
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 36.7 bits (81), Expect = 0.22
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 186 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 323
+ YGGQ+KP+F ++L C CK +LKR K F++
Sbjct: 46 QGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 33.5 bits (73), Expect = 2.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 186 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFE 320
+ +GG+ KPI I LR C CK + L R + FE
Sbjct: 46 KGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFE 90
>UniRef50_A6X4J5 Cluster: Polysaccharide pyruvyl transferase
precursor; n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Polysaccharide pyruvyl transferase precursor -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 391
Score = 32.7 bits (71), Expect = 3.7
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 8 FDVCLISVPNELKNGERTKTAQDVLQKM*MPQSTQGYHSTKSPR-KGTLPSAXRRY 172
FD+CL + N L+ G T V +K+ MP G K K LP RR+
Sbjct: 92 FDLCLFASANLLRPGYAATTESFVFEKLNMPIVVMGIGIQKKENLKAELPEGTRRF 147
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.5 bits (68), Expect = 8.5
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 358 WIICPFLXL---SPPSSKCLHLFNATCDLTLQSAHSRRS 251
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 31.5 bits (68), Expect = 8.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 294 ALKRCKHFELGGDXXRKG 347
+++RCKHFE+GGD KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,494,672
Number of Sequences: 1657284
Number of extensions: 6656511
Number of successful extensions: 15808
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15796
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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