Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G18
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   8.9  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    20   8.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 138 EPRTDFVQLQLTEWSIRFSIVACRXVRPMYSRII-LLGVIT 19
           E R DF++L +   + +  I ACR  +   S I+ LL  IT
Sbjct: 182 EARDDFIKLGIKLSNDKLEITACRLFKIDNSLILDLLVFIT 222


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -3

Query: 285 GIEEDHAANE*LIEWSHANLLRLYVLMLPSPXGSTESSGHGRRSLAAATEPRTD 124
           GI+E     + L++    NLLR Y        G  E SG    S++     R +
Sbjct: 769 GIDESVDYTKPLVDAQTMNLLRSYHQQQSHHYGRRERSGSESSSISERCSSRVE 822


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 375 LYFNSYSNRYRXC 337
           + FN YS+ Y  C
Sbjct: 72  MVFNDYSSEYEKC 84


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 22  DYPKEYNPAVH 54
           +YPKE+N  +H
Sbjct: 98  NYPKEWNKILH 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,316
Number of Sequences: 336
Number of extensions: 1670
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)