Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G18
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   2.7  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   2.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.2  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         22   8.2  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 115 LNEIGSWFGRRSXTP 159
           L +IG++FGR S TP
Sbjct: 16  LKDIGAFFGRSSKTP 30


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 115 LNEIGSWFGRRSXTP 159
           L +IG++FGR S TP
Sbjct: 47  LKDIGAFFGRSSKTP 61


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 7   NMAFGDYPKEYNPAVHGPYXPARYYGKPDTPFSQLKLNEIGSW 135
           +MA+ DY K Y+   H          K D    +L  + +G W
Sbjct: 601 DMAYIDYKKAYDSVPHSYLLKVLQLYKVDGNVIKLMQHAMGMW 643


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 46  AVHGPYXPARYYGKPDTPFSQL 111
           +VHGPY P    G  D+  +Q+
Sbjct: 9   SVHGPYPPHMVPGGVDSDGAQI 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,235
Number of Sequences: 2352
Number of extensions: 6929
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)