Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G18
         (434 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    67   4e-12
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    30   0.83 
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    30   0.83 
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    30   0.83 
U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical pr...    27   5.9  
Z49132-5|CAA88984.1|  396|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 67.3 bits (157), Expect = 4e-12
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = +1

Query: 19  GDYPKEYNPAVHGPYXPARYYGKPDTPFSQLKLNEIGSWFGRRSXTPSAVAGAFSRAXWR 198
           G + K +N  VHGPY   RYYGK DT F  +KL ++ +W  RR  TPSA    F R  WR
Sbjct: 47  GLFDKRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWR 106

Query: 199 WQHKY 213
             + Y
Sbjct: 107 VHNLY 111


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 29.9 bits (64), Expect = 0.83
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 79  YGKPDTPFSQLKLNEIGSWFGRRSXTPSAVAGAFSRAXWRWQHKYVQPKKVGMAPFYQ 252
           +  PD P  Q K+N+I   +   S  PS+ +G+ + +   ++  Y +P + G  P  Q
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 29.9 bits (64), Expect = 0.83
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 79  YGKPDTPFSQLKLNEIGSWFGRRSXTPSAVAGAFSRAXWRWQHKYVQPKKVGMAPFYQ 252
           +  PD P  Q K+N+I   +   S  PS+ +G+ + +   ++  Y +P + G  P  Q
Sbjct: 34  FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 29.9 bits (64), Expect = 0.83
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +1

Query: 43   PAVHGPYXPARYYGKPDTPFSQLKLNEIGSWFGRR--SXTPSAVAGAFSRAXWRWQHKYV 216
            P V  P     YY + D  +       IGS   RR  + T +++ GA SRA    QHKY 
Sbjct: 1295 PPVCEPPRAFGYYYEDDDVYETKSREMIGSGSERRPTTSTVTSMGGAMSRAIE--QHKYE 1352

Query: 217  QPKKVGMAPFYQ 252
            Q  +      YQ
Sbjct: 1353 QRMRQAQQHMYQ 1364


>U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical
           protein C56G2.4 protein.
          Length = 538

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 128 VRGSVAAARLRLPWPELSVEPXGDGNIS 211
           V G+V   R++LP   + ++P GD +IS
Sbjct: 295 VNGNVCCQRIKLPKTSIFLDPLGDVSIS 322


>Z49132-5|CAA88984.1|  396|Caenorhabditis elegans Hypothetical
           protein ZK666.5 protein.
          Length = 396

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 6   KYGFR*LPQGV*SCCTWALXSCTLLWKT*YSIQSVEAERNRFVVRS 143
           +YG   LP G+ +    A  SC   W+  Y +   +  ++ FV+ S
Sbjct: 246 RYGICILPVGLTAVWRAAQLSCRNRWRNSYLLNEYDNRKHNFVISS 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,851,119
Number of Sequences: 27780
Number of extensions: 156231
Number of successful extensions: 339
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)