Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G17
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   2.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   6.4  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   8.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -3

Query: 458 LSRHETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGG 333
           +SR     SS+R A     P       G  G   H+P + GG
Sbjct: 13  MSRSSYTRSSYRSAYYGGPPEIGGTGAGALGSQQHQPPYGGG 54


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 377 GPAGGATHRPAHSGGGTPSRTLARTSSP 294
           G   G   RPA+SG   PS    +T  P
Sbjct: 100 GDRNGDGGRPAYSGNSDPSMDQVKTDKP 127


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 361 PRTALHTAAAAPPRGPSLGPAHPGLSYPVR 272
           PRT   T    PPR   + P  PG+  P+R
Sbjct: 201 PRTGTPTQPQ-PPRPGGMYPQPPGVPMPMR 229


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 204 MDKSRLRQSTVHSNEIGERQRSQRTGY 284
           M +  + QSTV++N   +RQR+  T Y
Sbjct: 264 MKRVHIGQSTVNANGETKRQRTSYTRY 290


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = -3

Query: 371 AGGATHRPA-HSGGGTPS---RTLARTSSPGAXISGALTSLTLPNLVGMNGRLAQSAFIH 204
           AGG  H    HS G   +    T+ RT +      G     TLP L  +  R A +A +H
Sbjct: 349 AGGPGHGSGGHSNGSRANGGAATVGRTRAARTATDGGPDDRTLPELTQVRDRHA-AALLH 407


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 568 DGLTNISSIKMALKLNHILLICKLFSKLPNL 476
           D  T + +I+  L  N++  I  LF+KLPNL
Sbjct: 521 DNNTKLQAIR--LDGNYLTDIAGLFTKLPNL 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,871
Number of Sequences: 2352
Number of extensions: 14797
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)