Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_G17
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge spli... 35 0.084
BT011461-1|AAR99119.1| 638|Drosophila melanogaster RE27685p pro... 35 0.084
BT011351-1|AAR96143.1| 638|Drosophila melanogaster RE74788p pro... 35 0.084
AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge prot... 35 0.084
AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA... 35 0.084
AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA... 33 0.34
BT023873-1|AAZ86794.1| 512|Drosophila melanogaster AT21758p pro... 32 0.59
AE014134-1275|AAF52515.1| 421|Drosophila melanogaster CG5261-PA... 32 0.59
AE014134-1274|AAF52514.1| 512|Drosophila melanogaster CG5261-PB... 32 0.59
AE014297-461|AAN13377.1| 646|Drosophila melanogaster CG1021-PB,... 32 0.78
AE014297-460|AAF54123.2| 646|Drosophila melanogaster CG1021-PA,... 32 0.78
U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein. 31 1.0
AY060461-1|AAL25500.1| 80|Drosophila melanogaster SD04019p pro... 31 1.0
AE014297-2907|AAF55833.2| 80|Drosophila melanogaster CG17278-P... 31 1.0
AY061434-1|AAL28982.1| 753|Drosophila melanogaster LD36177p pro... 31 1.8
AE014134-3526|AAG22124.2| 753|Drosophila melanogaster CG1512-PB... 31 1.8
AE014134-3525|AAF57224.3| 753|Drosophila melanogaster CG1512-PA... 31 1.8
AF405293-1|AAK97502.3| 1232|Drosophila melanogaster unconvention... 30 2.4
X06589-2|CAA29813.1| 964|Drosophila melanogaster su(wa) protein... 30 3.2
X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein... 30 3.2
AY118635-1|AAM50004.1| 964|Drosophila melanogaster SD01276p pro... 30 3.2
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro... 30 3.2
AF454349-1|AAL91723.1| 689|Drosophila melanogaster unconvention... 30 3.2
AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconvention... 30 3.2
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P... 30 3.2
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P... 30 3.2
AE014134-1526|AAF52683.2| 1232|Drosophila melanogaster CG10595-P... 30 3.2
AE014134-1525|AAS64742.1| 690|Drosophila melanogaster CG10595-P... 30 3.2
AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-P... 30 3.2
AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA... 29 4.2
AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P... 29 5.5
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P... 29 5.5
AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA ... 29 5.5
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 28 9.6
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 28 9.6
BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p pro... 28 9.6
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 28 9.6
AY060704-1|AAL28252.1| 572|Drosophila melanogaster GH14591p pro... 28 9.6
AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm... 28 9.6
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 28 9.6
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA... 28 9.6
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 28 9.6
>DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge splice
variant protein.
Length = 705
Score = 35.1 bits (77), Expect = 0.084
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = -3
Query: 443 TASSSHRVANVLAVPX-ASKAHTGPAGGATHRPAHSG-----GGTPSRTLARTSSPGAXI 282
TAS+ A VLAV AS + P GGA++ AHSG GG S T + ++ GA
Sbjct: 197 TASTGATAAEVLAVSSSASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASN 256
Query: 281 SGA 273
S +
Sbjct: 257 SNS 259
>BT011461-1|AAR99119.1| 638|Drosophila melanogaster RE27685p
protein.
Length = 638
Score = 35.1 bits (77), Expect = 0.084
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = -3
Query: 452 RHETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGA 273
RH + S R + A A++ AGGAT AHS GGT + A T++ G SG+
Sbjct: 2 RHNSPVSRERASEAAA---ATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATSGS 55
Query: 272 LTS 264
T+
Sbjct: 56 GTA 58
>BT011351-1|AAR96143.1| 638|Drosophila melanogaster RE74788p
protein.
Length = 638
Score = 35.1 bits (77), Expect = 0.084
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = -3
Query: 452 RHETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGA 273
RH + S R + A A++ AGGAT AHS GGT + A T++ G SG+
Sbjct: 2 RHNSPVSRERASEAAA---ATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATSGS 55
Query: 272 LTS 264
T+
Sbjct: 56 GTA 58
>AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge
protein.
Length = 826
Score = 35.1 bits (77), Expect = 0.084
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = -3
Query: 443 TASSSHRVANVLAVPX-ASKAHTGPAGGATHRPAHSG-----GGTPSRTLARTSSPGAXI 282
TAS+ A VLAV AS + P GGA++ AHSG GG S T + ++ GA
Sbjct: 197 TASTGATAAEVLAVSSSASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASN 256
Query: 281 SGA 273
S +
Sbjct: 257 SNS 259
>AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA
protein.
Length = 826
Score = 35.1 bits (77), Expect = 0.084
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = -3
Query: 443 TASSSHRVANVLAVPX-ASKAHTGPAGGATHRPAHSG-----GGTPSRTLARTSSPGAXI 282
TAS+ A VLAV AS + P GGA++ AHSG GG S T + ++ GA
Sbjct: 197 TASTGATAAEVLAVSSSASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASN 256
Query: 281 SGA 273
S +
Sbjct: 257 SNS 259
>AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA
protein.
Length = 1357
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 413 VLAVPXASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPNLVGMN 234
VLA A + TG + G+ SG G+ S + SS G+ SG+ +S L L G +
Sbjct: 884 VLAAVSALSSITGKSSGSGSSSGSSGSGSSSGSSGSGSSSGSSGSGSSSSGLLSGLTGSS 943
Query: 233 G 231
G
Sbjct: 944 G 944
>BT023873-1|AAZ86794.1| 512|Drosophila melanogaster AT21758p
protein.
Length = 512
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 331 PPPLCAGRCVAPPAGPVCAFDAXGTARTFAT 423
PPP A APP P A A GT R +A+
Sbjct: 198 PPPAAAPAAAAPPPAPAAAPAAAGTGRVYAS 228
>AE014134-1275|AAF52515.1| 421|Drosophila melanogaster CG5261-PA,
isoform A protein.
Length = 421
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 331 PPPLCAGRCVAPPAGPVCAFDAXGTARTFAT 423
PPP A APP P A A GT R +A+
Sbjct: 107 PPPAAAPAAAAPPPAPAAAPAAAGTGRVYAS 137
>AE014134-1274|AAF52514.1| 512|Drosophila melanogaster CG5261-PB,
isoform B protein.
Length = 512
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 331 PPPLCAGRCVAPPAGPVCAFDAXGTARTFAT 423
PPP A APP P A A GT R +A+
Sbjct: 198 PPPAAAPAAAAPPPAPAAAPAAAGTGRVYAS 228
>AE014297-461|AAN13377.1| 646|Drosophila melanogaster CG1021-PB,
isoform B protein.
Length = 646
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 395 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTS 264
A++ AGGAT AHS GGT + A T++ G SG+ T+
Sbjct: 26 ATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATSGSGTA 66
>AE014297-460|AAF54123.2| 646|Drosophila melanogaster CG1021-PA,
isoform A protein.
Length = 646
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 395 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTS 264
A++ AGGAT AHS GGT + A T++ G SG+ T+
Sbjct: 26 ATQTAAATAGGAT---AHSAGGTAGGSAAATTTAGGATSGSGTA 66
>U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein.
Length = 829
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 443 TASSSHRVANVLAVPX-ASKAHTGPAGGATHRPAHSG 336
TAS+ A VLAV AS + P GGA++ AHSG
Sbjct: 197 TASTGATAAEVLAVSSSASVGSSSPTGGASNGTAHSG 233
>AY060461-1|AAL25500.1| 80|Drosophila melanogaster SD04019p
protein.
Length = 80
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 325 GVPPPL--CAGRCVAPPAGPVCAFDAXGTARTFATLCELEAVSCRESTYYAVTSLGVC 492
G+P P C C +CA D G+ +T+ LC ++ +C ++ + S C
Sbjct: 22 GLPDPSTKCVMECDTQEYRSICAADDKGSTKTYRNLCVMKTENCLQNANFQKISDKEC 79
>AE014297-2907|AAF55833.2| 80|Drosophila melanogaster CG17278-PA
protein.
Length = 80
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 325 GVPPPL--CAGRCVAPPAGPVCAFDAXGTARTFATLCELEAVSCRESTYYAVTSLGVC 492
G+P P C C +CA D G+ +T+ LC ++ +C ++ + S C
Sbjct: 22 GLPDPSTKCVMECDTQEYRSICAADDKGSTKTYRNLCVMKTENCLQNANFQKISDKEC 79
>AY061434-1|AAL28982.1| 753|Drosophila melanogaster LD36177p
protein.
Length = 753
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 202 QSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL--IRNTNVARLSNYQNARIVVFRRTDVY 29
+S+K+++ +L + + HH E+ L ++ + + + YQ A I++F D
Sbjct: 545 KSIKMFEDYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSL 604
Query: 28 GCRLIDST 5
CR I +T
Sbjct: 605 SCREIQNT 612
>AE014134-3526|AAG22124.2| 753|Drosophila melanogaster CG1512-PB,
isoform B protein.
Length = 753
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 202 QSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL--IRNTNVARLSNYQNARIVVFRRTDVY 29
+S+K+++ +L + + HH E+ L ++ + + + YQ A I++F D
Sbjct: 545 KSIKMFEDYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSL 604
Query: 28 GCRLIDST 5
CR I +T
Sbjct: 605 SCREIQNT 612
>AE014134-3525|AAF57224.3| 753|Drosophila melanogaster CG1512-PA,
isoform A protein.
Length = 753
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 202 QSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL--IRNTNVARLSNYQNARIVVFRRTDVY 29
+S+K+++ +L + + HH E+ L ++ + + + YQ A I++F D
Sbjct: 545 KSIKMFEDYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSL 604
Query: 28 GCRLIDST 5
CR I +T
Sbjct: 605 SCREIQNT 612
>AF405293-1|AAK97502.3| 1232|Drosophila melanogaster unconventional
myosin protein.
Length = 1232
Score = 30.3 bits (65), Expect = 2.4
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 109 HHTTSKNHSFSHTLPANSGSGGGEGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 168
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 169 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 213
>X06589-2|CAA29813.1| 964|Drosophila melanogaster su(wa) protein
protein.
Length = 964
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 377 GPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPN 249
G GG R G GT S L +SPGA +G ++S +L N
Sbjct: 12 GSVGGILRRTGQ-GSGTGSTILGNGNSPGALGAGKVSSSSLEN 53
>X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein
protein.
Length = 1042
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 377 GPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPN 249
G GG R G GT S L +SPGA +G ++S +L N
Sbjct: 12 GSVGGILRRTGQ-GSGTGSTILGNGNSPGALGAGKVSSSSLEN 53
>AY118635-1|AAM50004.1| 964|Drosophila melanogaster SD01276p
protein.
Length = 964
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 377 GPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPN 249
G GG R G GT S L +SPGA +G ++S +L N
Sbjct: 12 GSVGGILRRTGQ-GSGTGSTILGNGNSPGALGAGKVSSSSLEN 53
>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
Length = 1843
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/79 (22%), Positives = 28/79 (35%)
Frame = -2
Query: 474 DGVIRAFATRNSLEFT*SSECPRRSGCIKGAYWSCRRGHAPPCTQRRRHPLADPRSDQLT 295
+ IR + R + + PR G ++ W C + + P +Q
Sbjct: 1548 EAFIRCYTCRKRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCIKCRSSQRPGKMLYCEQCD 1607
Query: 294 RGXHIRCADFFDAPQSRWN 238
RG HI C P RW+
Sbjct: 1608 RGYHIYCLGLRTVPDGRWS 1626
>AF454349-1|AAL91723.1| 689|Drosophila melanogaster unconventional
myosin 29D shortisoform protein.
Length = 689
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 173 HHTTSKNHSFSHTLPANSGSGGGGGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 232
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 277
>AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconventional
myosin 29D protein.
Length = 1313
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 173 HHTTSKNHSFSHTLPANSGSGGGGGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 232
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 277
>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
protein.
Length = 2006
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/79 (22%), Positives = 28/79 (35%)
Frame = -2
Query: 474 DGVIRAFATRNSLEFT*SSECPRRSGCIKGAYWSCRRGHAPPCTQRRRHPLADPRSDQLT 295
+ IR + R + + PR G ++ W C + + P +Q
Sbjct: 1711 EAFIRCYTCRKRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCIKCRSSQRPGKMLYCEQCD 1770
Query: 294 RGXHIRCADFFDAPQSRWN 238
RG HI C P RW+
Sbjct: 1771 RGYHIYCLGLRTVPDGRWS 1789
>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
isoform D protein.
Length = 1272
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -3
Query: 419 ANVLAVPXASKAHTGPAGGAT--HRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPN 249
A +++ P A GP GG + P+ +G + S +L S P + G + +LP+
Sbjct: 13 AGIMSAPSEGGAGGGPVGGGSTATAPSATGSLSASASLVSHSHPPLQLRGVINKYSLPS 71
>AE014134-1526|AAF52683.2| 1232|Drosophila melanogaster CG10595-PA,
isoform A protein.
Length = 1232
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 109 HHTTSKNHSFSHTLPANSGSGGGGGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 168
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 169 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 213
>AE014134-1525|AAS64742.1| 690|Drosophila melanogaster CG10595-PC,
isoform C protein.
Length = 690
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 173 HHTTSKNHSFSHTLPANSGSGGGGGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 232
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 277
>AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-PB,
isoform B protein.
Length = 1317
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Frame = -3
Query: 449 HETASSSHRVANVLAVPXASKAHTGPAGGATHRPAHSGGGTP-SRTLARTSSPGAXISGA 273
H T S +H ++ L S G GGA ++ P LA SG+
Sbjct: 173 HHTTSKNHSFSHTLPANSGSGGGGGAGGGAVVSARNTSIPHPLPHQLAEKPGLSHQQSGS 232
Query: 272 ---LTSLTLPNLVGMNGRLAQSAFIHTV--TKTIQAKTFPLNISN 153
++ TLP++ GM L Q++ H + + T P+ SN
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHSHAPVNNNSNNSNTLPMRTSN 277
>AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA
protein.
Length = 1876
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 386 AHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAXISGALTSLTLPNLVG 240
+HT A A + + T + T A T SPGA G TS T ++ G
Sbjct: 1708 SHTSLANAAANMSGAATTNTTTTTTATTLSPGAAAGGPSTSATNDSVDG 1756
>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
isoform H protein.
Length = 1704
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -3
Query: 437 SSSHRVANVLAVPXASKAHTGPAGGATHRPAHS-GGGTPSRTLARTSSPGAXISGALT 267
+SS +A A A+ A P G AT GGTP+ A P + S A T
Sbjct: 1174 TSSFHIAPTTATTTAATATPTPTGAATTSDQQQQSGGTPAMVAANLEVPTSSSSSAAT 1231
>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
isoform D protein.
Length = 2063
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -3
Query: 437 SSSHRVANVLAVPXASKAHTGPAGGATHRPAHS-GGGTPSRTLARTSSPGAXISGALT 267
+SS +A A A+ A P G AT GGTP+ A P + S A T
Sbjct: 1192 TSSFHIAPTTATTTAATATPTPTGAATTSDQQQQSGGTPAMVAANLEVPTSSSSSAAT 1249
>AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA
protein.
Length = 730
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 337 PLCAGRCVAPPAGPVCAFDAX-GTARTFATLCELEAVSCRESTYYAVTSLGVC 492
P C C + PVC + G +TF + CE+ +C + + V GVC
Sbjct: 80 PSCEFEC-SSRYQPVCGISSKSGERKTFRSRCEMLRTACISRSEWMVHRWGVC 131
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 376 PVCAFDAXGTARTFATLCELEAVSCRESTYYAVTSLGVC 492
PVC + G +RTF+ +CEL S + + + G C
Sbjct: 295 PVCG-NLRGQSRTFSNVCELMEFSQKVGNAWTIAHNGAC 332
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 370 PAGPRTALHTAAAAPPRGPSLGPAHPGLS 284
P GP + A+ A PS PAHPG S
Sbjct: 1531 PGGPSFSPSAASDASGMSPSWSPAHPGSS 1559
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 370 PAGPRTALHTAAAAPPRGPSLGPAHPGLS 284
P GP + A+ A PS PAHPG S
Sbjct: 50 PGGPSFSPSAASDASGMSPSWSPAHPGSS 78
>BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p
protein.
Length = 395
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 443 TASSSHRVANVLAVPXASKAHTGPAGG-ATHRPAHSGGGTPSRTLARTSSPGAXI 282
TA S + + V + P + A P TH P H G PS + ++++ A I
Sbjct: 165 TARPSPKHSPVYSSPKHNTASNSPKSPFGTHSPKHGSSGKPSMSTLKSAATAATI 219
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 370 PAGPRTALHTAAAAPPRGPSLGPAHPGLS 284
P GP + A+ A PS PAHPG S
Sbjct: 1071 PGGPSFSPSAASDASGMSPSWSPAHPGSS 1099
>AY060704-1|AAL28252.1| 572|Drosophila melanogaster GH14591p
protein.
Length = 572
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = -3
Query: 380 TGPAGGATHRPAHSGGGTPSRTLA-------RTSSPGAXISGALTSLTLPNLVGMNGRLA 222
+ P G + P +SGG T ++T A +TS+ G A P +G+ G A
Sbjct: 372 SSPVGSSAATPVNSGGSTTNQTAADAAAISLKTSTGGMVPGSAFNFAPTPGTLGLYGDQA 431
Query: 221 QSA 213
+A
Sbjct: 432 AAA 434
>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP220 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 443 TASSSHRVANVLAVPXASKAHTGPAGG-ATHRPAHSGGGTPSRTLARTSSPGAXI 282
TA S + + V + P + A P TH P H G PS + ++++ A I
Sbjct: 850 TARPSPKHSPVYSSPKHNTASNSPKSPFGTHSPKHGSSGKPSMSTLKSAATAATI 904
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 370 PAGPRTALHTAAAAPPRGPSLGPAHPGLS 284
P GP + A+ A PS PAHPG S
Sbjct: 1529 PGGPSFSPSAASDASGMSPSWSPAHPGSS 1557
>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
protein.
Length = 1475
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 443 TASSSHRVANVLAVPXASKAHTGPAGG-ATHRPAHSGGGTPSRTLARTSSPGAXI 282
TA S + + V + P + A P TH P H G PS + ++++ A I
Sbjct: 850 TARPSPKHSPVYSSPKHNTASNSPKSPFGTHSPKHGSSGKPSMSTLKSAATAATI 904
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = -3
Query: 380 TGPAGGATHRPAHSGGGTPSRTLA-------RTSSPGAXISGALTSLTLPNLVGMNGRLA 222
+ P G + P +SGG T ++T A +TS+ G A P +G+ G A
Sbjct: 2265 SSPVGSSAATPVNSGGSTTNQTAADAAAISLKTSTGGMVPGSAFNFAPTPGTLGLYGDQA 2324
Query: 221 QSA 213
+A
Sbjct: 2325 AAA 2327
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,025,544
Number of Sequences: 53049
Number of extensions: 670365
Number of successful extensions: 2858
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2849
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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