Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G15
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     126   2e-31
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         109   3e-26
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      36   5e-04
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   0.48 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.0  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  126 bits (303), Expect = 2e-31
 Identities = 56/116 (48%), Positives = 79/116 (68%)
 Frame = +1

Query: 169 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLXLSVCSPYFQEM 348
           M   + F L WNN+ +++++ F  L    D V VTLA +GR L+AH++ LS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 349 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELXSFISTAEQLQVKGLT 516
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L SF+ TAE L+V GLT
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score =  109 bits (261), Expect = 3e-26
 Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 181 EQFSLCWNNFHANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLXLSVCSPYFQEMFKMN 360
           + + L WNN+ +NM++ FH LL     V VTLA     L+AHK+ LS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 361 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQEELXSFISTAEQLQVKGL 513
           P +HP I+  +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++KGL
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 169 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVXVTLAAE 285
           M   + F L WNN+ +++++ F  L    D V VTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 418 LLQFMYQGEVNVKQEELXSFIS-TAEQLQVKGLTGNQNEE 534
           ++  +Y G VNV+ E + S++    ++  V    GN NE+
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEK 82


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 536 LSSF*LPVKPLT*SCSAVLINDXNSSCLTLTSP 438
           LSS      P+T + S ++ N  NS+C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 146 FHVESSLSWRRTNNFHY 196
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query: 599 CLCCDDL-GPG 570
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,750
Number of Sequences: 438
Number of extensions: 3337
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)