Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G14
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    24   1.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.9  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +1

Query: 172 GDGAMEPLAAAPEVTYNWVDVTSDFFK 252
           G+  + P+AA+PE+  N +  + ++F+
Sbjct: 108 GNAILAPIAASPELRANLIASSFEYFE 134


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 223 SCRSLQEQQPEAPLLRHHNIHHYYRSYWNPCGIN 122
           SC ++Q  +  A LLRH N + +  S   P G++
Sbjct: 383 SCSNIQTGEQFARLLRH-NFNRHLNSNRAPLGLH 415


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 223 SCRSLQEQQPEAPLLRHHNIHHYYRSYWNPCGIN 122
           SC ++Q  +  A LLRH N + +  S   P G++
Sbjct: 390 SCSNIQTGEQFARLLRH-NFNRHLNSNRAPLGLH 422


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 CNNGMYCFLVGRTFSC 518
           C NG  C  +G+TF C
Sbjct: 153 CKNGGTCQDLGKTFMC 168


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 505 GHSLAQTVFTNLYLHQPH 558
           GH LA+    NL+++  H
Sbjct: 394 GHKLAKASIVNLHIYDLH 411


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 471 CNNGMYCFLVGRTFSCS 521
           C NG  C  +  +FSCS
Sbjct: 231 CQNGGTCHDLVNSFSCS 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,709
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)