Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G14
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630...    40   0.002
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    31   1.1  
02_01_0393 - 2863335-2864534                                           30   1.9  
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564...    28   5.6  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    28   7.5  

>02_05_1121 +
           34262019-34262040,34262144-34262211,34262909-34263067,
           34263146-34263313,34264125-34264278,34264845-34264924,
           34265567-34265839,34265956-34266099,34266750-34266884,
           34266994-34267092,34267530-34267586,34267673-34267877,
           34268159-34268277,34268779-34268877,34268964-34269203
          Length = 673

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +1

Query: 457 IGIIXATMACIVSWLEGHSLAQTVFTNLYL-HQPHSINNKILKAFC 591
           + ++    +C  +W +GH+LAQTVFT +YL     + ++ IL +FC
Sbjct: 73  LDVMDHLFSCEATWHKGHTLAQTVFTCIYLMRMERTSSHAILNSFC 118


>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 488 LFPGWKDILLLRPFLLICTYISH 556
           +FP WK++ +    +++CTY SH
Sbjct: 903 IFPPWKEVKVKEETVILCTYFSH 925


>02_01_0393 - 2863335-2864534
          Length = 399

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = -3

Query: 229 RPSCRSLQEQQPEA--PLLRHH--NIHHYY--RSYWNPCGINSKIINYH 101
           R +C++ +E       P L+    ++HHY+    + N CG+N+K+I  +
Sbjct: 197 RGNCKAFEELAASCSTPALKEELKDVHHYFLCSGFHNDCGVNNKLIEMY 245


>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
            21556524-21556620,21557113-21557141,21557620-21557781,
            21557981-21558061,21558156-21558314,21558394-21558510,
            21558598-21558666,21558753-21558831,21560884-21561050,
            21561109-21561229,21561522-21561649,21562293-21562361,
            21562408-21562539,21562619-21562991,21563274-21563398,
            21563500-21563655,21563785-21564198,21564634-21564691,
            21566522-21566648,21568047-21568305,21569005-21569104,
            21569231-21569317,21569454-21569692,21569914-21569999,
            21570409-21570532,21571111-21574332
          Length = 2444

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/66 (24%), Positives = 25/66 (37%)
 Frame = -3

Query: 325  LTLLQRVQKGVHHEVTLLTADLLCI*RNQMLHRPSCRSLQEQQPEAPLLRHHNIHHYYRS 146
            L L       V  +V  +     CI   Q  +RP+ R     +P+   + HH++      
Sbjct: 1960 LALTATATASVKEDVVQVLGLANCIIFRQSFNRPNLRIAGINKPDVRFVIHHSLPKSIEG 2019

Query: 145  YWNPCG 128
            Y   CG
Sbjct: 2020 YHQECG 2025


>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
            990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -3

Query: 325  LTLLQRVQKGVHHEVTLLTADLLCI*RNQMLHRPSCRSLQEQQPEAPL 182
            LT LQ+++   HH +  L A+L  +   + LH   CRS++ + PE  L
Sbjct: 1648 LTSLQQLEFSNHHYLESLPANLRSLDSLEALHINGCRSIR-RLPEMGL 1694


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,817,452
Number of Sequences: 37544
Number of extensions: 266136
Number of successful extensions: 515
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)