Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G11
         (649 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19727| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   1e-10
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.81 
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.5  
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  

>SB_19727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 236

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
 Frame = +2

Query: 260 LFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITF-YLLSRNNPTECDFKDNLKIINNEXGL 436
           +++DY+ +  D     +  P++      G++ F Y++  NNP +  + D L    NE   
Sbjct: 38  VYVDYKAVFVDFFKGARSKPLRT-SLGLGLLGFGYVVYLNNPDDDSYNDTLLDNANELLQ 96

Query: 437 XSEECLNPKAVEHLRFLXTCYNQXVIHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTY 616
             E   NP +  + + +   + Q  +  +S G+ S+M  +E    CDLY  HC YTK  +
Sbjct: 97  VGERIRNPSSDVYTQEMLQLFYQGKLRRQSFGLFSLMMQTEFGKDCDLYEQHCYYTKTRW 156

Query: 617 FSFPSRIVDIG 649
                 + D G
Sbjct: 157 VDLWKYVRDFG 167


>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 287

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 202 FHFGAYIFNRSRHFI-NTS*HFCGLYLLRRNTKCHPTHFILFYVSTYVVL 56
           F++  YI  R  H+   T+ +F    LLR   K H T  I FY + Y++L
Sbjct: 158 FYYANYIILRKLHYTAQTTLYFANYILLR---KLHSTTQITFYYANYILL 204


>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 407 LKIINNEXGLXSEECLNPKAVEHLRFLXTCYNQXVIHYRSLGILSVMYTSELSNSCDL 580
           L+   NE G  S+    P  +E         N  ++H R L +LS+M ++     CD+
Sbjct: 38  LQAETNEAGEKSKILKCPCCLEKTETANGEANYSILHSRFLEVLSIMESNTSGKECDI 95


>SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +2

Query: 179 KNISTKVKFPEKFKGTIIEKWADYWKNLFIDYRQMLQDLRSDIQD 313
           KNI  K     + +GT+ + W  + +  F+ Y+Q L++     ++
Sbjct: 135 KNIEEKHALRIQLEGTVEDLWRQFQQTAFLIYKQALKNYNETTEE 179


>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2532

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 361  IKGYDASCPLHGFHWII 311
            +KG+D +CP H   WII
Sbjct: 1356 LKGFDRTCPCHPQSWII 1372


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,868,501
Number of Sequences: 59808
Number of extensions: 377602
Number of successful extensions: 976
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)