Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_G11
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical ... 36 0.019
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 30 1.6
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 5.0
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 5.0
AF067937-3|AAF99913.2| 559|Caenorhabditis elegans Hypothetical ... 28 6.6
AF045639-6|AAX22296.1| 392|Caenorhabditis elegans Serpentine re... 28 6.6
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 27 8.7
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 27 8.7
>Z74475-4|CAD01086.1| 185|Caenorhabditis elegans Hypothetical
protein R04F11.5 protein.
Length = 185
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Frame = +2
Query: 245 DYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINN 424
+Y+K + DY + ++ +D P+KA +G+ + NPTE + D L
Sbjct: 19 EYFKRMGNDYATVARETVQGCKDRPVKAGVVFSGLGFLTYAYQTNPTELEMYDYLCERRQ 78
Query: 425 EXGLXSEECLNPKAVEHLRFLXTCYNQXVIHYRSLGILSVMYTSELSNSCDLYRAHCTYT 604
+ L NP + L +Q +HY +L S++ S+ ++ +Y + +
Sbjct: 79 KLVLVPNSEHNPATTKELTARDFLISQNRLHYYNLWFFSLLVASDYNDKLRIYSSQDSNL 138
Query: 605 KP-TYFSFPSRIVDIG 649
K + IVDIG
Sbjct: 139 KDWPWTELWRNIVDIG 154
>AF067940-4|AAC19201.1| 487|Caenorhabditis elegans Hypothetical
protein F36F12.2 protein.
Length = 487
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 458 PKAVEHLRFLXTCYNQXVIHYRSLGILSVMYTSELSNSCDLYRAH---CTYTKPTYFSFP 628
PK + + CYNQ H R G+LS T + C+L + CT++ TY S P
Sbjct: 405 PKDDFYTNIVFQCYNQSFYHIRDAGLLSAESTCVNAFDCELSQREAMPCTHSDATYHSGP 464
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -3
Query: 200 SLWCLYF*PFPTLY--KYFVTFLWSLFITKKYQMSSNTFYFILCKYLCSAQFILFLII 33
S+WC F + T++ KY F++++++ + + F+ +LC+ +A ILF II
Sbjct: 108 SVWCPIF--YKTMFNLKYTKLFIFAVWLISF--LIGSLFHIVLCRIRFNADLILFTII 161
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 349 DASCPLHGFHWIILYITP 296
DAS P+HGF+W+ Y P
Sbjct: 249 DASSPIHGFNWVASYNRP 266
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 246 SAHFSIIVPLNFSGNFTLVLIFLTVPDTL*ILRNIFVVFIYYEEIPNVI 100
+ HFS+++P GN VL L + + + IY +++PN +
Sbjct: 79 NVHFSLVIPAASIGNMRSVLTLLIALERVIAIYFPIFFHIYRQKLPNFV 127
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 169 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 83
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 169 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 83
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 169 RHFINTS*HFCGLYLLRRNTKCHPTHFIL 83
RH + +FC LYLLR + PT F L
Sbjct: 5 RHHLGGLLYFCALYLLRASQAQPPTFFAL 33
>AF067937-3|AAF99913.2| 559|Caenorhabditis elegans Hypothetical
protein F22F7.3 protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +2
Query: 362 LLSRNNPTECDFKDNLKIINNEXGLXSEECLNPKAVEHLRFLXTCYNQXVIHYRSLGILS 541
L+S + E D + +K I + + PK ++ + CYN H R L
Sbjct: 425 LISDQHLLEIDME--MKSILTSEPIAALSATLPKTDFYMPIIFKCYNDSFYHLRDTKTLL 482
Query: 542 VMYTSELSNSCDLYRAH---CTYTKPTYFSFP 628
T + C+L + CT++ TY S P
Sbjct: 483 NDVTCVNAFDCELPQQEGMPCTHSDATYHSGP 514
>AF045639-6|AAX22296.1| 392|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 5 protein.
Length = 392
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 185 YF*PFPTLYKYFVTFLWSLFITKKYQMSSNTFYFILCKY-LCSAQFILF 42
YF PFP + + F T + T K + S IL + + SAQF +F
Sbjct: 120 YFAPFPVIERCFATLYMHDYETNKRRWISYLLSTILYIFAITSAQFFIF 168
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 458 PKAVEHLRFLXTCY--NQXVIHYRSLGILSVMYTSELSNSCDLYRAHC 595
P A+ +L F T ++ VIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>Z81500-1|CAB04093.1| 390|Caenorhabditis elegans Hypothetical
protein F11D11.1 protein.
Length = 390
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Frame = +2
Query: 236 KWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP--TECDFKDNL 409
KW +K Y + R +D P KWT G Y NN TE DN
Sbjct: 193 KWVQEYKISNKTYPAWIGGARDCPEDSPCTIFKWTDGYTNLYDALNNNAQLTERTGFDNC 252
Query: 410 KII-----NNEXGLXSEECLNPKAVEHLRFL 487
I N + + S+ C+ P+A R +
Sbjct: 253 LAILPPRNNTDAIIFSQPCV-PEAYCQFRMI 282
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 458 PKAVEHLRFLXTCY--NQXVIHYRSLGILSVMYTSELSNSCDLYRAHC 595
P A+ +L F T ++ VIH+ L +LSV+ + E L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 458 PKAVEHLRFLXTCYNQXVIHYRSLGILSVMYTSELSNSCDLYRA---HCTYTKPTYFSFP 628
PK ++ + CYN+ H R + + SCDL + C ++ TY S P
Sbjct: 435 PKEEFYMPIIFKCYNESFYHLRDTNQMRPDILCVNAYSCDLPQQVGNRCVHSDATYHSGP 494
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 284 LQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIIN-NEXGLXSEE 448
+ DLR +K + T G F L + T+ DF+ LK+++ NE L E+
Sbjct: 130 VNDLRGKFVKPTLKKVSKTEG--KFDKLKKKEATKVDFRAQLKVVDKNEFALDEED 183
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 284 LQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIIN-NEXGLXSEE 448
+ DLR +K + T G F L + T+ DF+ LK+++ NE L E+
Sbjct: 130 VNDLRGKFVKPTLKKVSKTEG--KFDKLKKKEATKVDFRAQLKVVDKNEFALDEED 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,637,880
Number of Sequences: 27780
Number of extensions: 307488
Number of successful extensions: 720
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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