Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G10
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.        32   2.1  
AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens ...    32   2.1  

>BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.
          Length = 257

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -3

Query: 466 SVTLXTRAPPSNDGIPAPPSATPSGHSSSTY*ASEKFIXRF*PCTVKKNSSLRWCPATQS 287
           S +  + +P S+   P+P S++PS  SSST   S        P +   +SS   CP+   
Sbjct: 185 SPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSS---CPSAAL 241

Query: 286 RARPHAGRAA-CTP 248
             RP + +++ C P
Sbjct: 242 GRRPQSPQSSHCAP 255


>AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35107 fis, clone PLACE6006871, moderately
           similar to SUPPRESSOR PROTEIN SRP40. ).
          Length = 258

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -3

Query: 466 SVTLXTRAPPSNDGIPAPPSATPSGHSSSTY*ASEKFIXRF*PCTVKKNSSLRWCPATQS 287
           S +  + +P S+   P+P S++PS  SSST   S        P +   +SS   CP+   
Sbjct: 186 SPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSS---CPSAAL 242

Query: 286 RARPHAGRAA-CTP 248
             RP + +++ C P
Sbjct: 243 GRRPQSPQSSHCAP 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,030,007
Number of Sequences: 237096
Number of extensions: 1053570
Number of successful extensions: 5394
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5386
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)