Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G09
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.68 
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    24   4.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 172  IQNNNRQKKRRGGKI*IAQRTPGRRY*NLYKKILEK 279
            I N N QKK+ GG + +      ++Y N  KK+  K
Sbjct: 1564 IDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSK 1599


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 528 YRQXXSQVGDTVKITIKALNL 590
           Y    S  G  V++T+KALNL
Sbjct: 8   YTHTISPAGRAVELTVKALNL 28


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 549 VGDTVKITIKALNL*GPESTRTGHTLCS 632
           VG  V + I  LNL  PES R G  + S
Sbjct: 231 VGALVGLAILKLNLHEPESNRMGVQMLS 258


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 371 TEARAF*YIPKQSGRNNHDEYNFILT 294
           T + AF Y+  +  R   +EY  ILT
Sbjct: 115 TSSEAFVYLNHELDREAREEYTLILT 140


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 460 LSKLLSIRKYFCKSSKDVVRLLKKAIQTSKQRQ 362
           LS  L  R     + +    LL+KAI+TSK++Q
Sbjct: 386 LSHDLEERSMAAAAHRTAKSLLEKAIRTSKRQQ 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,043
Number of Sequences: 2352
Number of extensions: 11991
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)