Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G09
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    32   0.31 
U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z82096-2|CAB05032.1|  211|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U60979-1|AAC47277.1|  211|Caenorhabditis elegans CES-2 protein.        29   2.2  

>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -1

Query: 385  IQTSKQRQEPFSIYLNKAAGIITMNIILF*QNFKTAFRVFSCTNFNIAVRGYA-ELFIFF 209
            I T+ Q+Q+    +     G    +++L  + F T+    S TN++I+   ++     FF
Sbjct: 1251 ISTTLQKQKTNFKWRTAVVGSSHADVVLKLKQFLTSEHNTSLTNWHISTSHHSIGCSTFF 1310

Query: 208  HPVVSFGDYYSVF 170
            H +  F D+YS+F
Sbjct: 1311 HNIPEFEDHYSMF 1323


>U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK563.7 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 256 NFNIAVRGYAELFIFFHPVVSFGDYYSVFQWARGGAA-PWTLS 131
           NFN      ++L IF + ++S  D   V  W R G A PW +S
Sbjct: 54  NFNQKSMEMSDLKIFNNRLLSVDDKIGVVYWLRNGTAIPWVIS 96


>Z82096-2|CAB05032.1|  211|Caenorhabditis elegans Hypothetical
           protein ZK909.4 protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -2

Query: 285 RRLFEYFLVQILISPSGGTLSYLYFSTPSFLLAIIILYSNGPGVAPPLGLFPF 127
           R L   F  Q  + P  G+L + +    S L   +   S G  +  PLG+ PF
Sbjct: 5   RALSALFTNQAAVQPLLGSLGFPFNDGTSILTTALAAQSGGKKLDTPLGILPF 57


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 70  VKQAYRFAPXAVSRWT*EAKRKESKGRRHPGPIGIQNNNRQKKRRGGKI 216
           +KQ Y+F P +  +   E K K+ K   +  P+  QN+ + +     K+
Sbjct: 490 MKQKYKFVPTSKKQKLTETKNKDQKSTINESPVECQNSGQNEASNPTKL 538


>U60979-1|AAC47277.1|  211|Caenorhabditis elegans CES-2 protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -2

Query: 285 RRLFEYFLVQILISPSGGTLSYLYFSTPSFLLAIIILYSNGPGVAPPLGLFPF 127
           R L   F  Q  + P  G+L + +    S L   +   S G  +  PLG+ PF
Sbjct: 5   RALSALFTNQAAVQPLLGSLGFPFNDGTSILTTALAAQSGGKKLDTPLGILPF 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,210
Number of Sequences: 27780
Number of extensions: 283855
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)