Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G05
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 366 ELTKKFLCGEMSFADYSNEW----YYNDDEXG---ENVXIDKXYEYEXGH 494
           ++  K  C E S ++  NE+    +  +   G   E V IDK Y Y+  H
Sbjct: 483 QIDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVEMVLIDKGYAYDANH 532


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/40 (20%), Positives = 20/40 (50%)
 Frame = +1

Query: 526 KEGGVSLICLLHSWGLMGEANLRFARGDKETAEQMCHEII 645
           KE G  ++C + +W    +A  +F    +   +++C  ++
Sbjct: 633 KEEGPKVVCYMTNWAFYRKAEGKFV--PEHIDQRLCTHVV 670


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 218 YSFNLLKIFITCGVIHYCCY 277
           +  N+L IF    +I YC Y
Sbjct: 319 FCLNILSIFTYVPMILYCVY 338


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 218 YSFNLLKIFITCGVIHYCCY 277
           +  N+L IF    +I YC Y
Sbjct: 44  FCLNILSIFTYVPMILYCVY 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,013
Number of Sequences: 336
Number of extensions: 1973
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)