Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G03
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1026 + 30214437-30214937                                        188   3e-48
02_05_0416 + 28791512-28792012                                        185   3e-47
11_04_0079 - 13284869-13284929,13285518-13285639,13285749-132858...    31   1.1  
06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338     30   1.8  
07_03_0313 + 16620817-16621515                                         28   5.6  

>04_04_1026 + 30214437-30214937
          Length = 166

 Score =  188 bits (459), Expect = 3e-48
 Identities = 95/163 (58%), Positives = 115/163 (70%), Gaps = 1/163 (0%)
 Frame = -1

Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATS-DWKGXKIT 401
           MPPK DP ++  V +   GGEVGA SSLAPK GPLGLS KK+G+DIAK T+ DWKG ++T
Sbjct: 1   MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 400 VQLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNR 221
           V+LTVQN                  LKEP RDRKK  NIKH+GN SL+DVI IA+IMRNR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMRNR 120

Query: 220 SMARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 92
           SMA+ + G+VKEILGT  SVGCTV+G+ P DL  +I+ G + I
Sbjct: 121 SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEI 163


>02_05_0416 + 28791512-28792012
          Length = 166

 Score =  185 bits (450), Expect = 3e-47
 Identities = 93/163 (57%), Positives = 114/163 (69%), Gaps = 1/163 (0%)
 Frame = -1

Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATS-DWKGXKIT 401
           MPPK DP ++  V +   GGEVGA SSLAPK GPLGLS KK+G+DIAK T+ DWKG ++T
Sbjct: 1   MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 400 VQLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNR 221
           V+LTVQN                  LKEP RDRKK  NIKH+GN SL+DVI IA++MR R
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARVMRPR 120

Query: 220 SMARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 92
           SMA+ + G+VKEILGT  SVGCTV+G+ P DL  +I+ G + I
Sbjct: 121 SMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISDGEVEI 163


>11_04_0079 -
           13284869-13284929,13285518-13285639,13285749-13285820,
           13286048-13286200,13289510-13289709,13289745-13289947,
           13289991-13290181
          Length = 333

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 99  KAPLLMSSIRSCGGLPSTVHPTDCAVPRISF 191
           +APL   S+RSCG L   + P + ++PR+ +
Sbjct: 120 QAPLSPKSVRSCGPLKLVIEPYNGSLPRLHY 150


>06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338
          Length = 740

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/74 (29%), Positives = 39/74 (52%)
 Frame = +2

Query: 86  FINGQSSAVDVINKIMWRPALHSTSN*LCCAKNLFY*AXKVPGH*SVSHDLRNADYIFKG 265
           F++  +  + ++N I++RPA+ S +  +C A  +F          S  H L+ + YIF G
Sbjct: 412 FMSSIALIILLVNPILYRPAIRSYALSVCTAVGMFALMCAYAAG-STQH-LKTSIYIF-G 468

Query: 266 XVAVVFDIXLLFTV 307
            VA+V  I +L  +
Sbjct: 469 LVALVLFIMILVLI 482


>07_03_0313 + 16620817-16621515
          Length = 232

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 414 PFQSLVALAMSSPTFLXDRPRGPILGAKDDVAPTSPPTHXKFTILI 551
           PF     +A++      D     +LGAK D+   S P H K  +L+
Sbjct: 15  PFGQRCRIALAEKKLPYDYSEQELLGAKSDLLLRSNPIHAKVPVLL 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,150,209
Number of Sequences: 37544
Number of extensions: 300719
Number of successful extensions: 644
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)