Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_G03
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 231 2e-60
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 231 2e-60
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 231 2e-60
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 231 2e-60
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 231 2e-60
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 229 5e-60
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 221 2e-57
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 120 3e-27
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 52 1e-06
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 52 1e-06
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 50 1e-05
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 2e-60
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 2e-60
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 2e-60
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 2e-60
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 231 bits (565), Expect = 2e-60
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 229 bits (561), Expect = 5e-60
Identities = 106/160 (66%), Positives = 125/160 (78%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT+QN LKEPPRDRKKQ NIKH+GN + ++++ I + MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 153 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 221 bits (539), Expect = 2e-57
Identities = 102/160 (63%), Positives = 123/160 (76%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
MPPKFDPNEIK+V L C GEVGATS+LAPK GPLGLS KKVGDDIAKAT DWKG +ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
+LT++N LK+PPRDRKKQ NIKHNGN + ++++ IA+ MR+RS
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 98
+AR L G++KEI GTAQS+GC V+G PHD+IDDINSGA+
Sbjct: 121 LARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 120 bits (290), Expect = 3e-27
Identities = 52/75 (69%), Positives = 66/75 (88%)
Frame = -1
Query: 322 KEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRSMARYLXGSVKEILGTAQSVGCTVEG 143
KEPPRDRKKQ NIKH+GN + ++++ IA+ MR+RS+AR L G++KEILGTAQSVGC V+G
Sbjct: 53 KEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDG 112
Query: 142 RPPHDLIDDINSGAL 98
R PHD+IDDINSGA+
Sbjct: 113 RHPHDIIDDINSGAV 127
Score = 71.3 bits (167), Expect = 3e-12
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGL 467
MPPKFDPNEIK+V L C GGEVGATS+LAPK GPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = +1
Query: 415 PSSHLWPWQCHHPPFXETDQEDXF*GPKMMWHRL 516
PSSH PWQCHH PF ETD GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 52.4 bits (120), Expect = 1e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = +1
Query: 415 PSSHLWPWQCHHPPFXETDQEDXF*GPKMMWHRL 516
PSSH PWQCHH PF ETD GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = +1
Query: 415 PSSHLWPWQCHHPPFXETDQEDXF*GPKMMWHRL 516
PSSH PWQCHH PF TD GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,946,841
Number of Sequences: 237096
Number of extensions: 1665182
Number of successful extensions: 6506
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6506
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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