Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G03
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   214   4e-56
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    68   7e-12
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    29   3.8  
AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  214 bits (523), Expect = 4e-56
 Identities = 101/162 (62%), Positives = 123/162 (75%)
 Frame = -1

Query: 577 MPPKFDPNEIKIVNLXCVGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKGXKITV 398
           MPPKFDP EIKIV L CVGGEVGATS+LAPK GPLGLS KK+G+DIAKAT DWKG K+T 
Sbjct: 1   MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60

Query: 397 QLTVQNXXXXXXXXXXXXXXXXXXLKEPPRDRKKQXNIKHNGNXSLEDVIGIAKIMRNRS 218
           +LT+QN                  LKEPPRDRKK  N+KHNG+ +++ +I IA+IMR RS
Sbjct: 61  KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120

Query: 217 MARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 92
           MA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 162


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = -1

Query: 232 MRNRSMARYLXGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 92
           MR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 156 HPTDCAVPRISFTEPXRYRAIDL 224
           HPT CAV    F +P +Y  IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313


>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/38 (50%), Positives = 19/38 (50%)
 Frame = -1

Query: 526 VGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKG 413
           VGG VGATSS AP  G        V DD    TS  KG
Sbjct: 42  VGGSVGATSSAAPSGG--------VFDDSQSTTSTRKG 71


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/38 (50%), Positives = 19/38 (50%)
 Frame = -1

Query: 526 VGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKG 413
           VGG VGATSS AP  G        V DD    TS  KG
Sbjct: 32  VGGSVGATSSAAPSGG--------VFDDSQSTTSTRKG 61


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/38 (50%), Positives = 19/38 (50%)
 Frame = -1

Query: 526 VGGEVGATSSLAPKXGPLGLSXKKVGDDIAKATSDWKG 413
           VGG VGATSS AP  G        V DD    TS  KG
Sbjct: 32  VGGSVGATSSAAPSGG--------VFDDSQSTTSTRKG 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,325
Number of Sequences: 27780
Number of extensions: 241076
Number of successful extensions: 464
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)