Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_G02
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36949-1|CAA85415.1|  430|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U40270-1|AAC46954.1|  430|Caenorhabditis elegans ceOrc2p protein.      30   1.6  
Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z36949-1|CAA85415.1|  430|Caenorhabditis elegans Hypothetical
           protein F59E10.1 protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 38  ATLSPSFVTMPPKKQPEKSGSSGXQTRGKETGN 136
           AT+ PS      K  PEK GS   +T GKE  +
Sbjct: 10  ATVQPSAAVPVKKSTPEKEGSRQKKTNGKENAS 42


>U40270-1|AAC46954.1|  430|Caenorhabditis elegans ceOrc2p protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 38  ATLSPSFVTMPPKKQPEKSGSSGXQTRGKETGN 136
           AT+ PS      K  PEK GS   +T GKE  +
Sbjct: 10  ATVQPSAAVPVKKSTPEKEGSRQKKTNGKENAS 42


>Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical
           protein T03E6.8 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 129 VSFPRVWXPEDPDFSGCFFGGIVTKDGESVATIVQCCHRVVDS 1
           ++ PR W    P F   FFGGI    G  V++++ C   V DS
Sbjct: 196 IADPRQWEIYIPYFCSIFFGGICCFTG--VSSVLTCLKIVYDS 236


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 209 VSQNTGTCPESSCACPETSCAC 274
           +S  TG+  E+ CAC   +CAC
Sbjct: 126 LSLRTGSSNENGCACVHGNCAC 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,992,731
Number of Sequences: 27780
Number of extensions: 70168
Number of successful extensions: 281
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)