Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F24
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 190 1e-48
U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 31 0.94
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 2.2
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 2.2
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 28 5.0
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 28 5.0
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 5.0
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 6.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 6.6
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 27 8.7
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 27 8.7
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 27 8.7
AF025450-7|AAN63434.2| 170|Caenorhabditis elegans Hypothetical ... 27 8.7
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 190 bits (462), Expect = 1e-48
Identities = 90/142 (63%), Positives = 111/142 (78%)
Frame = +3
Query: 225 MASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPE 404
M LA++SVSDKTGL+ LA L GL LIASGGTA A+R+ G+ V DV+D+T+ PE
Sbjct: 1 MTDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPE 60
Query: 405 MLGGRVKTLHPAVHAGILXRLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVAD 584
MLGGRVKTLHPAVH GIL R ++SD++D+++ +SVVVCNLYPF +TV D +V +
Sbjct: 61 MLGGRVKTLHPAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEE 120
Query: 585 AVENIDIGGVTLLRAAAKNHDR 650
AVENIDIGGVTLLRAAAKNH+R
Sbjct: 121 AVENIDIGGVTLLRAAAKNHER 142
>U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical
protein ZC53.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = -1
Query: 412 PSISGALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPF 233
PS S A S +RP +++ A P A H+D+LF E LRR +FPF
Sbjct: 6 PSSSEAPTPSGQCSRLRPRSKNSTAPEPPAPKLTDHTDKLFI--------EQLRRTTFPF 57
Query: 232 DAMFCLLKHYCVTDL 188
+ L + + D+
Sbjct: 58 EFQNKLDSRWTIGDM 72
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 118 NPWHEVKNISDYNNRLSPP 174
N W++V N++DY+ RLS P
Sbjct: 380 NSWYQVTNVTDYHERLSEP 398
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 384 DITRAPEMLGGRVKTLHPAVHAGILXRLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 563
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 564 PDVTVADA 587
DVT A
Sbjct: 1032 FDVTAPGA 1039
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 384 DITRAPEMLGGRVKTLHPAVHAGILXRLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 563
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 564 PDVTVADA 587
DVT A
Sbjct: 1032 FDVTAPGA 1039
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 423 KTLHPAVHAGIL-XRLSDSDQEDMK 494
K+LHP+VHA +L +SD D ED++
Sbjct: 996 KSLHPSVHALVLEPMMSDPDGEDVE 1020
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 423 KTLHPAVHAGIL-XRLSDSDQEDMK 494
K+LHP+VHA +L +SD D ED++
Sbjct: 1081 KSLHPSVHALVLEPMMSDPDGEDVE 1105
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 522 PRLSSRTSDVSCLPGQSRIIEXRSQHVPLDVKFSPDLRASPVLS*CPTHLEL*GRRS 352
P S+ T+DVS + R IE + D + + D+ ++P+L+ H++L GR S
Sbjct: 591 PETSTATTDVSQMTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL-GRIS 646
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 228 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 386
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 228 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 386
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 228 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 386
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 228 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 386
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +2
Query: 326 QWRYRHGASERRPHSSRCVGHHESTGDARRSGENFT---SSGTCWDLXSIIRL*PGRHET 496
++R RHG E P R HH G+ + EN S ++ + + P +
Sbjct: 213 KYRPRHGEEEEEPSRER--EHHHHRGEEKPETENIAETPSKVVGLNMQMVAGVYPKEKKG 270
Query: 497 SEVRD-DKRGG 526
V D DKRGG
Sbjct: 271 PVVEDVDKRGG 281
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 335 YRHGASERRPHSSRCVGHHESTGDARRSGENFTSSGTC 448
Y+H A H+S HH +TG R +N T + C
Sbjct: 61 YQHQALPVTMHTSTSSAHHTTTGHGRGRRKNSTINLVC 98
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 335 YRHGASERRPHSSRCVGHHESTGDARRSGENFTSSGTC 448
Y+H A H+S HH +TG R +N T + C
Sbjct: 61 YQHQALPVTMHTSTSSAHHTTTGHGRGRRKNSTINLVC 98
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 335 YRHGASERRPHSSRCVGHHESTGDARRSGENFTSSGTC 448
Y+H A H+S HH +TG R +N T + C
Sbjct: 35 YQHQALPVTMHTSTSSAHHTTTGHGRGRRKNSTINLVC 72
>AF025450-7|AAN63434.2| 170|Caenorhabditis elegans Hypothetical
protein C41H7.2 protein.
Length = 170
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 429 KFSPDLRASPVLS*CPTHLEL*GRRSEAPWRYRHWQSTAGH 307
KF R P S C T + G +EAP +R Q+TA +
Sbjct: 128 KFPATPRILPTRSSCSTACQSSGEENEAPKNHRKAQTTAAY 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,288,464
Number of Sequences: 27780
Number of extensions: 254285
Number of successful extensions: 708
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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