Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F23
         (344 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5KH83 Cluster: Expressed protein; n=2; Filobasidiella ...    33   0.98 
UniRef50_Q26HJ6 Cluster: Conserved hypothetical transmembrane pr...    32   2.3  
UniRef50_Q9FG37 Cluster: Gamma-tubulin interacting protein-like;...    31   5.3  

>UniRef50_Q5KH83 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 636

 Score = 33.5 bits (73), Expect = 0.98
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -3

Query: 270 YLLFIFYYSSDDTQPKQRCENKA--ILYLLEKFYTIH 166
           ++L  FY S+  T P Q+C+  A  ILYLL+ F ++H
Sbjct: 479 FILRPFYRSTSTTIPAQKCQQAAQSILYLLDLFESVH 515


>UniRef50_Q26HJ6 Cluster: Conserved hypothetical transmembrane
           protein; n=1; Flavobacteria bacterium BBFL7|Rep:
           Conserved hypothetical transmembrane protein -
           Flavobacteria bacterium BBFL7
          Length = 934

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 151 SIICQLIIXKYHKIIHNFNXRLKLNFTIWSDSVKLF 44
           +II  +I   YHK++  FN R  +  T+W  S+  F
Sbjct: 64  AIIAVVISFSYHKLLERFNLRYIIRSTLWFFSIAFF 99


>UniRef50_Q9FG37 Cluster: Gamma-tubulin interacting protein-like;
           n=5; Magnoliophyta|Rep: Gamma-tubulin interacting
           protein-like - Arabidopsis thaliana (Mouse-ear cress)
          Length = 838

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 12  LWKXI-PNYSLSNSFTLSDHMVKFNLSLXLKLCIILW 119
           +WK + PN   SNSF      VK  L   L+ C +LW
Sbjct: 622 IWKTMKPNCITSNSFVKLQSSVKLQLLSALRRCQVLW 658


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,095,986
Number of Sequences: 1657284
Number of extensions: 2821070
Number of successful extensions: 7493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7492
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)