Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F23
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.38 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.38 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   6.2  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.38
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 HMNSIKLFKQVKDCFVFTSLFWLSVITAVI 252
           H N +   ++V D F    L W+S+I  V+
Sbjct: 224 HSNLVTTSEEVCDSFSIFGLVWISLIFVVL 253


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 0.38
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 HMNSIKLFKQVKDCFVFTSLFWLSVITAVI 252
           H N +   ++V D F    L W+S+I  V+
Sbjct: 224 HSNLVTTSEEVCDSFSIFGLVWISLIFVVL 253


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 99  KLCIILWYFXIINWHIILYXSSYE 170
           K C I+  F +I + ++LY +S E
Sbjct: 40  KNCTIVIIFHLILFAVLLYFASLE 63


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/36 (22%), Positives = 16/36 (44%)
 Frame = +3

Query: 102 LCIILWYFXIINWHIILYXSSYE*YKTFQASKGLLC 209
           +C++ W+   +    +L  + Y+    F  SK   C
Sbjct: 190 ICLLAWFIAALFTSPMLVIAEYKQLDYFDGSKVPAC 225


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 213  HIFVLVECHHCCNKK 257
            HI    E + CC KK
Sbjct: 1355 HILASTELNLCCTKK 1369


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 213  HIFVLVECHHCCNKK 257
            HI    E + CC KK
Sbjct: 1355 HILASTELNLCCTKK 1369


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 213  HIFVLVECHHCCNKK 257
            HI    E + CC KK
Sbjct: 1355 HILASTELNLCCTKK 1369


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 213  HIFVLVECHHCCNKK 257
            HI    E + CC KK
Sbjct: 1355 HILASTELNLCCTKK 1369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,683
Number of Sequences: 336
Number of extensions: 960
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)