Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F23
         (344 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37033| Best HMM Match : Annexin (HMM E-Value=0)                     33   0.047
SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.4  
SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.4  
SB_58464| Best HMM Match : S1-P1_nuclease (HMM E-Value=6.9)            26   7.1  

>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 287

 Score = 33.5 bits (73), Expect = 0.047
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 267 LLFIFYYSSDDTQPKQRCENKAILYLL 187
           L+ IF+Y+ D    K  C+NKA++YLL
Sbjct: 85  LILIFFYTLDIASNKPGCDNKALMYLL 111


>SB_31651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 827

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 184 KVLYYSYEDXYSIICQLIIXKYHKIIHNFNXRLKLNFTIW 65
           + + +SY    S++C L   K  K+  NFN    + F+++
Sbjct: 702 RAVMFSYFIFMSLLCTLYAFKARKLPDNFNEARYIGFSLY 741


>SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 184 KVLYYSYEDXYSIICQLIIXKYHKIIHNFNXRLKLNFTIW 65
           + + +SY    S++C L   K  K+  NFN    + F+++
Sbjct: 641 RTVMFSYFIFMSLLCTLYAFKARKLPDNFNETRYIGFSLY 680


>SB_58464| Best HMM Match : S1-P1_nuclease (HMM E-Value=6.9)
          Length = 403

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 270 YLLFIFYYSSDDTQPKQRCENKAILYLLE 184
           YLLF  YY   +   K RC    ++Y+LE
Sbjct: 284 YLLFCLYYFPGENPLKSRCTR--LIYILE 310


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,438,180
Number of Sequences: 59808
Number of extensions: 84461
Number of successful extensions: 198
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 510674393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)