Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F23
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical pr... 27 4.8
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 27 4.8
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 27 4.8
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 27 4.8
Z29443-6|CAA82573.2| 280|Caenorhabditis elegans Hypothetical pr... 26 6.3
U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical pr... 26 6.3
U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical pr... 26 6.3
U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical pr... 26 6.3
L26545-2|AAA20080.1| 280|Caenorhabditis elegans CED-9 protein. 26 6.3
AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical ... 26 6.3
AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical ... 26 6.3
Z82051-5|CAB04813.1| 216|Caenorhabditis elegans Hypothetical pr... 26 8.3
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 26 8.3
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 26 8.3
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 267 LLFIFYYSSDDTQPKQRCENKAILYLLEKFYTIHMK 160
+ F+ YY D +P Q+ NKAI + ++ ++ K
Sbjct: 893 ICFVDYYDQDRMKPLQKIANKAIQNMKQRARSVSPK 928
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 267 LLFIFYYSSDDTQPKQRCENKAILYLLEKFYTIHMK 160
+ F+ YY D +P Q+ NKAI + ++ ++ K
Sbjct: 893 ICFVDYYDQDRMKPLQKIANKAIQNMKQRARSVSPK 928
>Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical
protein C18D4.9 protein.
Length = 361
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 166 MNSIKL-FKQVKDCFVFTSLFWLSVIT 243
MNS L F+ + D F F+S FW++++T
Sbjct: 1 MNSSLLNFEYLSDLFAFSSEFWVALMT 27
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 175 YYSYEDXYSIICQLIIXKYHKIIHNFNXRLKLNFTIWSDSVKLFESE*F 29
Y Y + IC LI+ HKI+H R ++ ++ + ++ +S F
Sbjct: 192 YMLYLKITNFICNLILLFIHKILHQRYRRKNVSLSVKYEMQEISQSSRF 240
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 267 LLFIFYYSSDDTQPKQRCENKAILYLLEKFYTIHMK 160
+ F+ YY D +P Q+ NKAI + ++ ++ K
Sbjct: 893 ICFVDYYDQDRMKPLQKIANKAIQNMKQRARSVSPK 928
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 267 LLFIFYYSSDDTQPKQRCENKAILYLLEKFYTIHMK 160
+ F+ YY D +P Q+ NKAI + ++ ++ K
Sbjct: 893 ICFVDYYDQDRMKPLQKIANKAIQNMKQRARSVSPK 928
>Z29443-6|CAA82573.2| 280|Caenorhabditis elegans Hypothetical
protein T07C4.8 protein.
Length = 280
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 166 MNSIKLFKQVKDCFVFTSLF 225
M S++L QV++ FV+TSLF
Sbjct: 186 MESVELQGQVRNLFVYTSLF 205
>U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical
protein T17E9.2c protein.
Length = 403
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 270 YLLFIFYYSSDDTQPKQRCENKAILYLLEKF 178
Y +++YY + PKQ + IL EKF
Sbjct: 324 YAAYLYYYVAGSVTPKQLINDSLILANREKF 354
>U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical
protein T17E9.2b protein.
Length = 452
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 270 YLLFIFYYSSDDTQPKQRCENKAILYLLEKF 178
Y +++YY + PKQ + IL EKF
Sbjct: 373 YAAYLYYYVAGSVTPKQLINDSLILANREKF 403
>U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical
protein T17E9.2a protein.
Length = 450
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 270 YLLFIFYYSSDDTQPKQRCENKAILYLLEKF 178
Y +++YY + PKQ + IL EKF
Sbjct: 371 YAAYLYYYVAGSVTPKQLINDSLILANREKF 401
>L26545-2|AAA20080.1| 280|Caenorhabditis elegans CED-9 protein.
Length = 280
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 166 MNSIKLFKQVKDCFVFTSLF 225
M S++L QV++ FV+TSLF
Sbjct: 186 MESVELQGQVRNLFVYTSLF 205
>AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical
protein K09C6.8 protein.
Length = 548
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/26 (34%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 148 IICQ-LIIXKYHKIIHNFNXRLKLNF 74
++C+ L + +YH+ I++F+ R +NF
Sbjct: 86 VVCRYLALNQYHQTIYHFHFRAAINF 111
>AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical
protein K09C6.7 protein.
Length = 587
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/26 (34%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 148 IICQ-LIIXKYHKIIHNFNXRLKLNF 74
++C+ L + +YH+ I++F+ R +NF
Sbjct: 271 VVCRYLALNQYHQTIYHFHFRAAINF 296
>Z82051-5|CAB04813.1| 216|Caenorhabditis elegans Hypothetical
protein T23D5.8 protein.
Length = 216
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 270 YLLFIFYYSSDDTQPKQRC 214
YL+++ YY + DT P C
Sbjct: 122 YLIWVSYYCTHDTPPSDEC 140
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +3
Query: 39 LSNSFTLSDHMVKFNLSLXLKLCIILWYFXIINWHIILYXSS 164
+ N+F +D + + L L +L YF + W I+++ ++
Sbjct: 719 IKNTFNFTDIWLSTLAVIVLSLAFVLLYFVPLRWIILVWGTN 760
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +3
Query: 39 LSNSFTLSDHMVKFNLSLXLKLCIILWYFXIINWHIILYXSS 164
+ N+F +D + + L L +L YF + W I+++ ++
Sbjct: 805 IKNTFNFTDIWLSTLAVIVLSLAFVLLYFVPLRWIILVWGTN 846
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,027,977
Number of Sequences: 27780
Number of extensions: 73041
Number of successful extensions: 242
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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