Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F19
(339 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 123 9e-28
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 119 1e-26
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 106 1e-22
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 87 7e-17
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 82 3e-15
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 77 8e-14
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 75 3e-13
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 74 7e-13
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 73 1e-12
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 73 1e-12
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-11
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 65 3e-10
UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces cere... 64 6e-10
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 60 7e-09
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 60 1e-08
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-08
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 58 3e-08
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 58 4e-08
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 58 5e-08
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 57 9e-08
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 57 9e-08
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 56 2e-07
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 56 2e-07
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 54 5e-07
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 54 8e-07
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 54 8e-07
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 54 8e-07
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 53 1e-06
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 53 1e-06
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 51 4e-06
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 50 8e-06
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 50 8e-06
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 50 1e-05
UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis ... 50 1e-05
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 50 1e-05
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 49 2e-05
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 48 5e-05
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 46 1e-04
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 46 2e-04
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 46 2e-04
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 45 4e-04
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 45 4e-04
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 45 4e-04
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 44 5e-04
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 44 5e-04
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 44 5e-04
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 44 7e-04
UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),... 44 7e-04
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 44 7e-04
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 44 9e-04
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 43 0.001
UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|R... 43 0.001
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 43 0.001
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 43 0.001
UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm... 43 0.001
UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -... 43 0.002
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 43 0.002
UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila melanogaster|... 42 0.002
UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albica... 42 0.002
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 42 0.003
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 42 0.003
UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1; ... 42 0.003
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 42 0.003
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 42 0.003
UniRef50_A3LX11 Cluster: Predicted protein; n=3; Saccharomycetac... 42 0.004
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 42 0.004
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 41 0.005
UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;... 41 0.005
UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11; Saccharomyc... 41 0.005
UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associa... 41 0.006
UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia... 40 0.014
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 40 0.014
UniRef50_Q2FM21 Cluster: Like-Sm ribonucleoprotein, core; n=4; M... 40 0.014
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 40 0.014
UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Re... 39 0.019
UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae... 39 0.019
UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1... 39 0.025
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 39 0.025
UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putati... 38 0.033
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 38 0.033
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 38 0.044
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.044
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.044
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 38 0.058
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.058
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 38 0.058
UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei... 38 0.058
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 37 0.077
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 37 0.077
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 37 0.077
UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protei... 37 0.077
UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T... 37 0.077
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 37 0.077
UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta... 37 0.10
UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.10
UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lambl... 37 0.10
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 37 0.10
UniRef50_A6R7U2 Cluster: Predicted protein; n=2; Eurotiomycetida... 36 0.13
UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus ful... 36 0.13
UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18... 36 0.13
UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiell... 36 0.18
UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.18
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 36 0.18
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 36 0.18
UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei... 36 0.18
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.18
UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;... 36 0.24
UniRef50_Q3LW01 Cluster: MRNA splicing factor; n=1; Bigelowiella... 36 0.24
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 36 0.24
UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lambl... 36 0.24
UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, puta... 36 0.24
UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 36 0.24
UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167, w... 36 0.24
UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 0.24
UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotei... 35 0.31
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 35 0.31
UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPRO... 35 0.31
UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3; ... 35 0.31
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 35 0.41
UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 35 0.41
UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1; Filobas... 35 0.41
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 35 0.41
UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;... 35 0.41
UniRef50_Q8SQK1 Cluster: U6 snRNA-ASSOCIATED RIBONUCLEOPROTEIN; ... 34 0.54
UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 0.54
UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1; ... 34 0.54
UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1; ... 34 0.54
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 34 0.72
UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; T... 34 0.72
UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; E... 34 0.72
UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 0.95
UniRef50_A2DLB2 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 33 0.95
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 33 0.95
UniRef50_Q4JAY5 Cluster: Conserved Archaeal protein; n=4; Sulfol... 33 0.95
UniRef50_A3QER8 Cluster: DNA polymerase III, alpha subunit; n=1;... 33 1.3
UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila melanogaster|... 33 1.3
UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 1.3
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep... 33 1.3
UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 33 1.3
UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like prot... 33 1.7
UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep... 33 1.7
UniRef50_Q98RT8 Cluster: Small nucleolar ribonucleoprotein G; n=... 33 1.7
UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 1.7
UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 1.7
UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces cere... 33 1.7
UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear ri... 33 1.7
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 33 1.7
UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein ... 32 2.2
UniRef50_Q5KWM7 Cluster: Hypothetical conserved protein; n=2; Ge... 32 2.2
UniRef50_Q9VLV1 Cluster: CG14532-PA; n=1; Drosophila melanogaste... 32 2.2
UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; ... 32 2.2
UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Re... 32 2.2
UniRef50_Q9FI15 Cluster: Similarity to small nuclear ribonucleop... 32 2.9
UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putati... 32 2.9
UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein, put... 32 2.9
UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6 sn... 32 2.9
UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3; ... 32 2.9
UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf prot... 31 3.8
UniRef50_A1IGG1 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:... 31 3.8
UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p... 31 3.8
UniRef50_A2FKH2 Cluster: 3'5'-cyclic nucleotide phosphodiesteras... 31 3.8
UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 31 3.8
UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266, w... 31 3.8
UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145, w... 31 3.8
UniRef50_A7DPN6 Cluster: Peptidase S8 and S53, subtilisin, kexin... 31 3.8
UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20... 31 3.8
UniRef50_UPI0000E49E77 Cluster: PREDICTED: hypothetical protein;... 31 5.1
UniRef50_Q55A45 Cluster: Putative small nuclear ribonucleopartic... 31 5.1
UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ... 31 5.1
UniRef50_Q4P8W1 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_UPI0000499249 Cluster: U6 snRNA-associated Sm-like prot... 31 6.7
UniRef50_O22305 Cluster: Peptide transporter; n=1; Lotus japonic... 31 6.7
UniRef50_Q4V620 Cluster: IP06106p; n=3; Sophophora|Rep: IP06106p... 31 6.7
UniRef50_Q18183 Cluster: Putative uncharacterized protein; n=3; ... 31 6.7
UniRef50_A0CSI7 Cluster: Chromosome undetermined scaffold_26, wh... 31 6.7
UniRef50_Q6CNK7 Cluster: Similar to sp|P14907 Saccharomyces cere... 31 6.7
UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere... 31 6.7
UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1; H... 31 6.7
UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;... 31 6.7
UniRef50_A3J9C5 Cluster: NAD-specific glutamate dehydrogenase; n... 30 8.8
UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole gen... 30 8.8
UniRef50_A5B6G6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein, puta... 30 8.8
UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1; Plasm... 30 8.8
UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein, put... 30 8.8
UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B, puta... 30 8.8
UniRef50_A2D8V4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A... 30 8.8
UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB, pu... 30 8.8
UniRef50_Q9HLU6 Cluster: Amylopullulanase related protein; n=1; ... 30 8.8
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 123 bits (296), Expect = 9e-28
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMV 312
MSKAHPPE+KK+MDK++ +KLN GRAVTG+LRGFDPFMN+VLD++VEECKD + N+GMV
Sbjct: 1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMV 60
Query: 313 VIRGNSIIM 339
VIRGNSI+M
Sbjct: 61 VIRGNSIVM 69
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 119 bits (286), Expect = 1e-26
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMV 312
MSKAHPPELKKFMDKKLS+KLN GR V G+LRGFDPFMNLV+DE VE GQ+ N+GMV
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
Query: 313 VIRGNSIIM 339
VIRGNSIIM
Sbjct: 61 VIRGNSIIM 69
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 106 bits (254), Expect = 1e-22
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMV 312
MSK HPPELKK+MDK++ +KLN R V+G+LRGFDPFMN+V+DE+VE KDG N+GM
Sbjct: 1 MSKTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGMT 60
Query: 313 VIRGNSIIM 339
VIRGNS+++
Sbjct: 61 VIRGNSVVI 69
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 87.0 bits (206), Expect = 7e-17
Identities = 37/69 (53%), Positives = 55/69 (79%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMV 312
MSKA P+LKK++D+++ ++LN R V GVLRG+D F+N+VL++S+EE DG++ +G V
Sbjct: 1 MSKAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVKIGSV 60
Query: 313 VIRGNSIIM 339
IRGNS+IM
Sbjct: 61 AIRGNSVIM 69
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 81.8 bits (193), Expect = 3e-15
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +1
Query: 127 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVG 306
+T K P+L K +DKKL+IKLN R V G+LRGFD FMN+ L ++VE ++ +G
Sbjct: 1 MTFGKQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIG 60
Query: 307 MVVIRGNSIIM 339
MV+IRGNSI++
Sbjct: 61 MVIIRGNSILL 71
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 77.0 bits (181), Expect = 8e-14
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +1
Query: 127 ITMSKAHPP-ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV 303
+T+ KA P + +KFM+K+L I LN R V G+LRG+D FMNLVLD ++E KD ++ ++
Sbjct: 3 LTVGKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKD-EQIDI 61
Query: 304 GMVVIRGNSI 333
G+VVIRGNSI
Sbjct: 62 GVVVIRGNSI 71
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 74.9 bits (176), Expect = 3e-13
Identities = 31/68 (45%), Positives = 52/68 (76%)
Frame = +1
Query: 136 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVV 315
++A+ +++M+K++ +LN R V G+LRG+D FMN+VLDE+ EE + G++ +GM+V
Sbjct: 12 TEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIV 71
Query: 316 IRGNSIIM 339
IRGNS++M
Sbjct: 72 IRGNSVVM 79
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 73.7 bits (173), Expect = 7e-13
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 124 HITMSKAHPPELKKFMD-KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
H + PP LK+ KL IKLNA R V G LRGFD FMNLV+D ++ E + +
Sbjct: 14 HHAAASGQPPALKQVHGTSKLQIKLNANRVVVGTLRGFDQFMNLVIDNTM-EVNGNDKND 72
Query: 301 VGMVVIRGNSIIM 339
+GMVVIRGNS++M
Sbjct: 73 IGMVVIRGNSVVM 85
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/58 (53%), Positives = 46/58 (79%)
Frame = +1
Query: 163 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
++MDKKL ++LN R+VTG+LRGFD F+NLVLD+S + ++ +GMVV+RGNS++
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTT-EKTPMGMVVVRGNSVV 85
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSIIM 339
M+K++ +LN R V G+LRG+D FMN+VLDE+ EE + G++ +GMVVIRGNS++M
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNSVVM 57
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 69.7 bits (163), Expect = 1e-11
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 10/77 (12%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC----------K 282
M+K PELK+F+DK++++ + GR + G LRGFD F+NLV+DE++E+ +
Sbjct: 48 MAKVSQPELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVWQ 107
Query: 283 DGQRXNVGMVVIRGNSI 333
DG R G VV+RGNS+
Sbjct: 108 DGDR--CGTVVVRGNSV 122
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 65.3 bits (152), Expect = 3e-10
Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSI 333
L +F+DK + +K GR TG+L+G+D MNLV+D+ VEE +DG+ ++G+VV+RG +I
Sbjct: 29 LAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPNI 88
Query: 334 IM 339
++
Sbjct: 89 VL 90
>UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces
cerevisiae YFL017wa SNP2 snRNP G protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P40204
Saccharomyces cerevisiae YFL017wa SNP2 snRNP G protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 71
Score = 64.1 bits (149), Expect = 6e-10
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = +1
Query: 160 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
K++MDKKL ++LN R + G+LRG+D F+NLVLD ++ ++G+ V+RGNSI+
Sbjct: 5 KQYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGEVQMGPQTVVRGNSIV 63
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 60.5 bits (140), Expect = 7e-09
Identities = 26/64 (40%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK--DGQRXNVGMVVIRG 324
PELK +++K++ +K++ R++ GVL G+D +MNLVLDE+ + + +GM++I G
Sbjct: 6 PELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYDASNPDTDKHIPIGMIMILG 65
Query: 325 NSII 336
NSI+
Sbjct: 66 NSIL 69
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 60.1 bits (139), Expect = 1e-08
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 8/70 (11%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRXNVGM 309
+L KF+DK + +KL GR VTG L+G+D +NLVLDE+VE +D Q +G+
Sbjct: 24 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGL 83
Query: 310 VVIRGNSIIM 339
+V RG ++++
Sbjct: 84 IVCRGTAVML 93
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 60.1 bits (139), Expect = 1e-08
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 9/70 (12%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD---------GQRXNVG 306
+L K+ D K+ +KL GR VTGVL+G+DP M LVLDE+VE +D Q ++G
Sbjct: 40 DLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSIILKDQTRDLG 99
Query: 307 MVVIRGNSII 336
+ VIRG ++
Sbjct: 100 LTVIRGTVLL 109
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 58.4 bits (135), Expect = 3e-08
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ----RXNVGMVVIR 321
+L K+M+K++ +K N GR VTG L+G+D MNLVLD+ E +D + ++G++V R
Sbjct: 86 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVAR 145
Query: 322 GNSIIM 339
G +++
Sbjct: 146 GTLLVL 151
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
+LKK+MD+++++K N GR VTG L+G+D MNLVLD+ E + G+VV RG +
Sbjct: 57 DLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVR-------GLVVARGTLL 109
Query: 334 IM 339
++
Sbjct: 110 VV 111
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 57.6 bits (133), Expect = 5e-08
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRXNVGM 309
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E +D +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 310 VVIRGNSIIM 339
VV RG S+++
Sbjct: 74 VVCRGTSVVL 83
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 56.8 bits (131), Expect = 9e-08
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG--------QRXNVGM 309
+L +F+D+ + +KL+ GR VTG L+G+D +NLVLDE++E +D + +G+
Sbjct: 9 DLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDETRALGL 68
Query: 310 VVIRGNSIIM 339
+V RG S+++
Sbjct: 69 LVCRGTSVMV 78
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 56.8 bits (131), Expect = 9e-08
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRXNVGMV 312
L K ++K++ +K + GR V GVLRG D NLVLD++VE KD G++ N+G++
Sbjct: 17 LNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKRNLGLL 76
Query: 313 VIRGNSI 333
V RG S+
Sbjct: 77 VARGTSV 83
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 55.6 bits (128), Expect = 2e-07
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG-----QRXNVGMVV 315
P L FM+K++ +K+ GR+++GVLRG D M++VL ++++E ++ R +G V
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSEEARLALGTTV 67
Query: 316 IRGNSII 336
IRG++I+
Sbjct: 68 IRGSAIV 74
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 55.6 bits (128), Expect = 2e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +1
Query: 187 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
+ LN R V GVLRG+D FMN+VLD ++E + Q ++G+VV+RGNSI+
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEDQ-VDLGVVVVRGNSIL 75
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 54.4 bits (125), Expect = 5e-07
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
+L K+MDK++ +K N GR V+G+L+G+D MNLVLD+ V+E G+ N
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDD-VKESMRGKSLN 101
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 53.6 bits (123), Expect = 8e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 285
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E +D
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRD 57
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 53.6 bits (123), Expect = 8e-07
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +1
Query: 112 YFKKHITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
Y +I MS L KF +K++ +KL GR V G+LRGFD NLVLDE+VE
Sbjct: 9 YLSFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVE 62
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 53.6 bits (123), Expect = 8e-07
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD-------GQRXNVGMV 312
+L ++ D+++ GR +TG+L+GFD MNLVLD+ E+ ++ G +G+V
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86
Query: 313 VIRGNSIIM 339
V+RG ++++
Sbjct: 87 VVRGTTLVL 95
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 53.2 bits (122), Expect = 1e-06
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 17/84 (20%)
Frame = +1
Query: 139 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE-------ECKDG--- 288
+ + +L K+ K+L IKLNA R + G + GFD FMNLVLD E E KD
Sbjct: 12 QGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKELIPGQGAENKDNLYP 71
Query: 289 -------QRXNVGMVVIRGNSIIM 339
Q ++G ++RGNSIIM
Sbjct: 72 GFSNVTDQLVDIGQAIVRGNSIIM 95
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 ITMSKAHPPELKKFMDKK-LSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV 303
I M+K L + ++++ + I L GR + GVL+G+D MNLVLD++ EE GQ ++
Sbjct: 4 IDMTKRPMDILDQVLNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKA-EEIVQGQAQSI 62
Query: 304 GMVVIRGNSII 336
G ++IRG+++I
Sbjct: 63 GTLIIRGDNVI 73
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRXNVGM 309
++KKFM++K+ +K + GR V G L G D NLVLD++ E +D + N+G+
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSYVITEKSRNIGL 79
Query: 310 VVIRGNSIIM 339
+V RG S+ +
Sbjct: 80 IVARGTSVAL 89
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 50.4 bits (115), Expect = 8e-06
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = +1
Query: 139 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVI 318
K + P+LK FM++++ I+L + G LRGFD F+N+VL++S K+ ++ +++
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS-SYSKESNYFDI--LIV 60
Query: 319 RGNSII 336
RGNSI+
Sbjct: 61 RGNSIM 66
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 50.4 bits (115), Expect = 8e-06
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
+L K+ D K+ +KL G+ V GVL+G+D MNLVLD++VE
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE 68
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 50.0 bits (114), Expect = 1e-05
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSI 333
L K ++K++ +L G AV GVL +D MNLVL+++ E K G+ + G +VIRG+ +
Sbjct: 16 LTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAELDKSGEPKTRYGRIVIRGSQV 75
Query: 334 I 336
I
Sbjct: 76 I 76
>UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 81
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 127 ITMSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVL-DESVEECKDGQRX 297
+ M++A PP ELK + KK+ I N R V+G+L GFD FMNL + D ++ D
Sbjct: 3 VQMTQAQPPYPELKGHLQKKVKIMSNKDREVSGILTGFDHFMNLTIRDAQIKTPYDKAPV 62
Query: 298 NVGMVVIRGNSII 336
VIRG I+
Sbjct: 63 FCNSCVIRGTMIL 75
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L + +++ + IKL + + G L GFD MNL+LD S E +G+ +G +V+RG++++
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGEAKGLGSIVVRGDNVV 69
Query: 337 M 339
M
Sbjct: 70 M 70
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 49.2 bits (112), Expect = 2e-05
Identities = 22/60 (36%), Positives = 41/60 (68%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L++ ++K++S+ L R + G L G+D +MN+VLD+ V+E + +G VVIRG++++
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDD-VDENSENVSRKLGTVVIRGSNVV 66
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ---RXNVGMVVIRGN 327
L ++DKKL + L GR + GVLR FD F N VL+ + E G +G+ VIRG
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGE 74
Query: 328 SIIM 339
++++
Sbjct: 75 NVVL 78
Score = 40.3 bits (90), Expect = 0.008
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 175 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ---RXNVGMVVIRGNSIIM 339
+KL + L GR + GVLR FD F N VL+ + E G +G+ VIRG ++++
Sbjct: 135 EKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVL 192
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG---QRXNVGMVVIRGNSIIM 339
+DKKL + L GR G++R FD F N+VL +++E G N+G+ IRG+++++
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVI 68
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L+ F+D + ++L G+ + G L FD +NLVLD+ VE +D + +G V+IRG+S+
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEIDEDSE-VRLGRVLIRGDSVT 65
Query: 337 M 339
+
Sbjct: 66 L 66
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 46.0 bits (104), Expect = 2e-04
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGNSIIM 339
+DKK+ + L G+ + GVLR +D F NLVL ++VE G R G+ ++RG ++++
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLVRGENVVL 81
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGNSIIM 339
+DK+L + L G + G LR FD F N+VL+ +VE G+ + +G+ ++RG ++++
Sbjct: 17 LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVL 76
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 44.8 bits (101), Expect = 4e-04
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGNSIIM 339
+DKK + L GR + G+LR D F NLVL ++VE G++ G+ V+RG ++++
Sbjct: 14 IDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVVRGENVVL 73
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK 282
+L + DK++ +K GR V GVL+GFD MNLVL++ E +
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 44.8 bits (101), Expect = 4e-04
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSII 336
++ + IKL R GVL+ FD MNLVL+++ EE +DG+ +G V+IRG++I+
Sbjct: 22 LNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDA-EELEDGEVTRRLGTVLIRGDNIV 77
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Frame = +1
Query: 166 FMDKKLSIKL----NAGRAVTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNS 330
F+ K++ +++ N + G + GFD +MN+VLDE+ E +CK Q+ +G ++++G +
Sbjct: 19 FLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKTNQKREIGRILLKGEN 78
Query: 331 IIM 339
I +
Sbjct: 79 ITL 81
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE-ECKDGQ-RXNVGMVVIRGNS 330
L ++K + +KL AGR ++G LR D MN+VLD++ E + + Q G V+IRGN
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEELDTRTNQVIVRYGKVLIRGNQ 75
Query: 331 II 336
++
Sbjct: 76 VL 77
>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Schizosaccharomyces pombe (Fission yeast)
Length = 75
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV-GMVVIRGNSI 333
L K + KK+ I+L++G G+L D +MNL L E EE +G++ NV G IRGN++
Sbjct: 9 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLAL-ERTEEYVNGKKTNVYGDAFIRGNNV 67
Query: 334 I 336
+
Sbjct: 68 L 68
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 124 HITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV 303
HI K L+K++D+K+ + G V GVL+GFD +NLVL ++ +D +
Sbjct: 7 HILKKKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRDTHVRKI 65
Query: 304 GMVVIRGNSI 333
G V+RG +
Sbjct: 66 GACVVRGGPV 75
>UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),
putative; n=11; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein (LSM1), putative - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 177
Score = 44.0 bits (99), Expect = 7e-04
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNV--GMVVIRG 324
+L DKKL + L GR + GVLR +D F NLVL +++E G ++ G+ ++RG
Sbjct: 52 QLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRG 111
Query: 325 NSIIM 339
++++
Sbjct: 112 ENVLL 116
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC----KDGQRXNVGMVVIRG 324
L FM++++ + N GR V G L+GFD NL+L +S E +D + +G+ ++RG
Sbjct: 3 LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRG 62
Query: 325 NSIIM 339
++ M
Sbjct: 63 ENVAM 67
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 43.6 bits (98), Expect = 9e-04
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ---RXNVGMVVIRGN 327
L F+DKKL + L GR + G L FD F N+VL + E G+ +G+ VIRG
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 75
Query: 328 SIIM 339
++++
Sbjct: 76 NVVL 79
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
P L+ +D+ +S+ N GR + G LRGFD N++LDES E
Sbjct: 6 PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|Rep:
LSM1-like protein - Bombyx mori (Silk moth)
Length = 138
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGNSIIM 339
+DKKL + L GR + G LR D F NLVL +++E G+ G+ ++RG ++++
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVL 77
>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
Length = 78
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
M K+ P L + K++ +++ G + G+L G+D FMN+VL E E
Sbjct: 1 MGKSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L+ + K++ +KL + G+LR FD +NL+L E EE DG G +V+RG +++
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLL-EDAEEIIDGNVYKRGTMVVRGENVL 74
>UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm1;
n=23; Eumetazoa|Rep: U6 snRNA-associated Sm-like protein
LSm1 - Homo sapiens (Human)
Length = 133
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGNSIIM 339
+DKK + L GR + G LR D F NLVL ++VE G++ G+ V+RG ++++
Sbjct: 14 IDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVL 73
>UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -
Homo sapiens (Human)
Length = 145
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Frame = +1
Query: 202 GRAVTGVLRGFDPFMNLVLDESVEECKD--------GQRXNVGMVVIRGNSIIM 339
GR +G+L+GFDP +NLVLD ++E +D +G+VV RG S+++
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVL 125
>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Homo sapiens (Human)
Length = 80
Score = 42.7 bits (96), Expect = 0.002
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 127 ITMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN- 300
+++ K P + LK+ + + + +KLN+G GVL D +MN+ L E EE +GQ N
Sbjct: 1 MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAL-EQTEEYVNGQLKNK 59
Query: 301 VGMVVIRGNSII 336
G IRGN+++
Sbjct: 60 YGDAFIRGNNVL 71
>UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila
melanogaster|Rep: IP05148p - Drosophila melanogaster
(Fruit fly)
Length = 99
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 294
+DKKL + L GR + G LR D F NLVL ++E GQR
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCGQR 75
>UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albicans
CaSMX4 U6 snRNA-associated Sm-like protein; n=2;
Saccharomycetaceae|Rep: Similar to CA3420|CaSMX4 Candida
albicans CaSMX4 U6 snRNA-associated Sm-like protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 88
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +1
Query: 148 PPELKKF-MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE---ECKDGQR---XNVG 306
P +L ++ +D+ + +KL R + G L+G+D N++L ++VE + +GQ N
Sbjct: 13 PLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVEYIYDVPEGQEPVTKNTD 72
Query: 307 MVVIRGNSIIM 339
MV +RG+S+I+
Sbjct: 73 MVFVRGDSVIL 83
>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 84
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
L + + ++++L+ G G L+ D +MN+VLDE+ E Q N G V IRGN+
Sbjct: 21 LSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNN 78
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR--XNVGMVVIRGNS 330
LK+ ++ ++ +KL G G L D MNL+LD+++E +G R +G V+I+G+
Sbjct: 16 LKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVADNGTRLVAKIGRVLIKGSM 75
Query: 331 I 333
+
Sbjct: 76 V 76
>UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3D6.08c - Schizosaccharomyces pombe (Fission yeast)
Length = 140
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC-KDGQRXNV--GMVVIRGN 327
L ++D+K+ + L G+ + G+LR FD F NL+L ++E D ++ G+ ++RG
Sbjct: 16 LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGE 75
Query: 328 SIIM 339
++++
Sbjct: 76 NVVL 79
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 41.9 bits (94), Expect = 0.003
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN-VGMVVIRGNSI 333
L + + + ++L GR G L G+D MNLVL ++ EE ++G+ VG VVIRG+++
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDA-EEIQNGEVVRKVGSVVIRGDTV 67
Query: 334 I 336
+
Sbjct: 68 V 68
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/63 (28%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE----ECKDGQRXNVGMVVIRG 324
L+ ++++ +++ + GR + G L+GFD +NL+LDES E + ++ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 325 NSI 333
+++
Sbjct: 65 DNV 67
>UniRef50_A3LX11 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 92
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 133 MSKAHPPELK--KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 285
M+ A P L +F+ L + + GR VTG+L DPF NL+L +EE +D
Sbjct: 1 MASASNPSLTPDQFIGSNLRVAIKDGRVVTGILTVIDPFGNLLLSNVIEESED 53
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 41.5 bits (93), Expect = 0.004
Identities = 16/58 (27%), Positives = 38/58 (65%)
Frame = +1
Query: 166 FMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSIIM 339
++D + +KL +G + GVL+ +D +N++L ++ EE + +G+ ++RG+S+++
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDA-EEIGETSIRRLGLTLVRGDSVVV 72
>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
Guillardia theta|Rep: Small nuclear ribonucleoprotein F
- Guillardia theta (Cryptomonas phi)
Length = 73
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 172 DKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
+K + +KL G + TG+ G D +MN++LD E + +G+V+IR N+I+
Sbjct: 12 NKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVITEQNLGFLGLVLIRCNNIL 66
>UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lsm-1 - Caenorhabditis elegans
Length = 125
Score = 41.1 bits (92), Expect = 0.005
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE-------CKDGQRXNVGMVVIRGN 327
+DKKL + L GR + G LR D F NL+L++ VE C+ GQ G ++IRG
Sbjct: 18 LDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQ----GFMLIRGE 73
Query: 328 SI 333
++
Sbjct: 74 NV 75
>UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11;
Saccharomycetales|Rep: Sm-like protein LSm1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 172
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV-----GMVVIRGNSI 333
+D+K+ + L GR + GVLR FD + NL+L + VE + G+ +IRG ++
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 334 IM 339
+M
Sbjct: 110 VM 111
>UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associated
protein B; n=4; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein-associated protein B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +1
Query: 142 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 276
AH L +D KL + GR G L FD MNLVL+E +EE
Sbjct: 7 AHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEE 51
>UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_122_3813_3433 - Giardia lamblia ATCC
50803
Length = 126
Score = 39.5 bits (88), Expect = 0.014
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
LK ++ ++S+ L ++TG+L FD MNL+L + EE ++VIRG+SII
Sbjct: 57 LKTSLEDRVSVLLQNNSSITGLLASFDEHMNLIL-INAEETGHSLNRFFPLLVIRGDSII 115
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 39.5 bits (88), Expect = 0.014
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE--CKDG-QRXNVGMVVIRGN 327
+ K + K+ I + + +TG LRGFD +MN+VL++ V+ DG + + ++ GN
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVDYSFSADGVKTTELNDALVNGN 75
Query: 328 SIIM 339
++ M
Sbjct: 76 NVAM 79
>UniRef50_Q2FM21 Cluster: Like-Sm ribonucleoprotein, core; n=4;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 79
Score = 39.5 bits (88), Expect = 0.014
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 181 LSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
+ +K + GR G L D ++NL L+ES+E + +G +VIRGN+I+
Sbjct: 22 VEMKEDEGRTFQGRLVAVDEYLNLHLEESIETSGKNKGRELGTLVIRGNNIL 73
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 39.5 bits (88), Expect = 0.014
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
LK + + + I + R +G+L G+D +MN+VL + E + V++RG+++I
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKGVYDRVLVRGDNVI 73
>UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Rep:
AER432Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 158
Score = 39.1 bits (87), Expect = 0.019
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +1
Query: 142 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 276
+H LK +D KL + GR G L FD MNLVL + VEE
Sbjct: 6 SHRSTLKDLIDYKLRVLSQDGRVYVGTLLAFDAHMNLVLADCVEE 50
>UniRef50_A1CE19 Cluster: LSM domain protein; n=3;
Trichocomaceae|Rep: LSM domain protein - Aspergillus
clavatus
Length = 108
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNS 330
L + + +++KLN+G G L+ D +MN+ L++S +E DG+ R + G IRGN+
Sbjct: 15 LSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQS-KEFMDGKLRRSYGDAFIRGNN 72
>UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1;
Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein U6 - Cryptosporidium parvum Iowa II
Length = 160
Score = 38.7 bits (86), Expect = 0.025
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN---VGMVVIRGN 327
L++ +DK++ + L GR TG+ R FD + +L L+ S E + N G ++ RG+
Sbjct: 46 LEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEIYQGCMIFRGD 105
Query: 328 SIIM 339
++++
Sbjct: 106 NLML 109
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 38.7 bits (86), Expect = 0.025
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 276
+D+K+ + L GR G+LR FD F NLVL ++ E+
Sbjct: 24 IDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEK 59
>UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putative;
n=2; Theileria|Rep: Small nuclear ribonucleoprotein,
putative - Theileria parva
Length = 91
Score = 38.3 bits (85), Expect = 0.033
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+ G +RGFD +MN+VLD + E K + +VG ++++G+ + +
Sbjct: 41 IEGTIRGFDEYMNMVLDNATEVHVKKNVKKDVGRILLKGDCMTL 84
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 38.3 bits (85), Expect = 0.033
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRG 324
+L+ ++K++ I+ GR V G L FD +NLVLDE V E QR +G+V+ RG
Sbjct: 11 KLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDE-VREL-PSQRI-LGLVICRG 64
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 127 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFD-PFMNLVLDESVEECKDGQRXNV 303
I S+ EL +DKK+ + L GR G+L GFD P +N++L+ +V D +
Sbjct: 4 IDASRRLAAELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENAV----DNKGNKY 59
Query: 304 GMVVIRGNSI 333
V+I+G I
Sbjct: 60 PKVIIKGERI 69
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 37.9 bits (84), Expect = 0.044
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +1
Query: 136 SKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-XNV 303
S+ P EL K + ++ I + + + + G L GFD F+N+VL++ E +G+R +
Sbjct: 10 SQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69
Query: 304 GMVVIRGNSIIM 339
+++ GN+I M
Sbjct: 70 DQILLNGNNITM 81
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 37.9 bits (84), Expect = 0.044
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESV--------EECKDGQRXNVGMV 312
LK +D+++ IKL R + G L+ FD N+VL ++V EE + +R MV
Sbjct: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER-RCEMV 66
Query: 313 VIRGNSIIM 339
IRG+++ +
Sbjct: 67 FIRGDTVTL 75
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 37.5 bits (83), Expect = 0.058
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 196 NAGRAVTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
N + G L GFD ++NLVLD +VE + K +G ++++G +I++
Sbjct: 38 NDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKATKELGKILLKGENIVL 86
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 37.5 bits (83), Expect = 0.058
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L + + +++KLN+G G L+ D +MN+ L+++ E ++ + G +RGN+++
Sbjct: 18 LGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRSYGDAFVRGNNVM 77
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 37.5 bits (83), Expect = 0.058
Identities = 16/46 (34%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-----ECKDGQRXNVGMVVIRGNSI 333
+ G +RGFD FMNLV+D++VE + + +R +G ++++G+++
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVEVRMATKTDEEKRRPLGQILLKGDNV 88
>UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein
F; n=7; Magnoliophyta|Rep: Probable small nuclear
ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear
cress)
Length = 88
Score = 37.5 bits (83), Expect = 0.058
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRX-NVGMVVIRGN 327
P L K + +KL G G L D +MNL L + EE DGQ N+G ++IR N
Sbjct: 10 PFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNT-EEYIDGQLTGNLGEILIRCN 68
Query: 328 SII 336
+++
Sbjct: 69 NVL 71
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 37.1 bits (82), Expect = 0.077
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 226 RGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+GFD +MNLVLDE+ E K R ++G ++++G++I +
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDTRKSLGRILLKGDNITL 135
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 37.1 bits (82), Expect = 0.077
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG----QRXNVGMVVIRG 324
L+ +++ +SI GR G L+GFD +N++LDES E ++ +G+ +IRG
Sbjct: 71 LESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRG 130
Query: 325 NSI 333
+++
Sbjct: 131 DNV 133
>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
putative; n=1; Filobasidiella neoformans|Rep: U6
snRNA-associated sm-like protein lsm6, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 88
Score = 37.1 bits (82), Expect = 0.077
Identities = 15/60 (25%), Positives = 35/60 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L+ + K++ +++ +G TG+L D +MN+ L+++ E + + G +RGN+++
Sbjct: 21 LRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLRGNNVL 80
>UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protein -
Methanosarcina acetivorans
Length = 74
Score = 37.1 bits (82), Expect = 0.077
Identities = 17/63 (26%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAG-RAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
+++K + ++ +++ + G L+ D +MNL L +++E + + ++G VV+RGN+
Sbjct: 6 KVQKIVGSRIRVEMKGDLNLLEGTLKSVDDYMNLHLVDTMEIVRGEKVRSLGSVVLRGNN 65
Query: 331 IIM 339
II+
Sbjct: 66 IIL 68
>UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2;
Thermoprotei|Rep: Small nuclear ribonucleoprotein -
Cenarchaeum symbiosum
Length = 106
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 127 ITMSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
++ S A P L+K K ++++L G + D +MNL++ ++ E N
Sbjct: 27 VSQSNAKRPLTALQKSTKKAVTVRLKNETEYKGKMENVDSYMNLIMTDAEEFHDSKVVAN 86
Query: 301 VGMVVIRGNSII 336
G V++RGN+++
Sbjct: 87 YGRVIVRGNNVL 98
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 37.1 bits (82), Expect = 0.077
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+ G + GFD +MNLVLD++ E K R +G ++++G++I +
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITL 86
>UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F,
putative, expressed; n=5; Oryza sativa|Rep: Small
nuclear ribonucleoprotein F, putative, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 86
Score = 36.7 bits (81), Expect = 0.10
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGN 327
P L K + +KL G G L D +MNL L + EE DGQ N+G ++IR N
Sbjct: 10 PFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQL-ANTEEYIDGQFSGNLGEILIRCN 68
Query: 328 SII 336
+++
Sbjct: 69 NVL 71
>UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 111
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+ G + GFD +MNLVLD++ E K R ++G ++++G++I +
Sbjct: 30 IEGRIIGFDEYMNLVLDDAEEINVKKDTRKSLGRILLKGDNITL 73
>UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_47464_47838 - Giardia lamblia
ATCC 50803
Length = 124
Score = 36.7 bits (81), Expect = 0.10
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = +1
Query: 175 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG------QRXNVGMVVIRGNSII 336
K + ++L +GR +TGVL+ +D +NLV E+ E ++ +R N ++RG+++I
Sbjct: 62 KPVLVQLRSGRFITGVLKAYDRHLNLVFSEATETWEENGIEYTEERKN---FMLRGDNVI 118
Query: 337 M 339
M
Sbjct: 119 M 119
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 36.7 bits (81), Expect = 0.10
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC--KDG--QRXNVGMVVI 318
P L++F++ + + GR GVL+GFD NLVL +E D + +G+ ++
Sbjct: 3 PILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLL 62
Query: 319 RGNSIIM 339
RG++I++
Sbjct: 63 RGDNIVL 69
>UniRef50_A6R7U2 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 104
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 193 LNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSIIM 339
L + +G L GFD ++N+VL++ E G + + +++ GN+I M
Sbjct: 43 LTSNSEFSGTLLGFDDYVNMVLEDVTEFDYTGSQTKLSKILLNGNNICM 91
>UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus
fulgidus|Rep: SnRNP, putative - Archaeoglobus fulgidus
Length = 75
Score = 36.3 bits (80), Expect = 0.13
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGR-AVTGVLRGFDPFMNLVLDESVEECKDGQRX-NVGMVVIRGNS 330
+K + K + +++ + G L G D +MNL L ++E CK ++ ++G +V+RGN+
Sbjct: 8 VKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME-CKGEEKVRSLGEIVLRGNN 66
Query: 331 IIM 339
+++
Sbjct: 67 VVL 69
>UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 92
Score = 36.3 bits (80), Expect = 0.13
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+ G + GFD +MNLVLD++ E K R +G ++++G++I +
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITL 86
>UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiella
natans|Rep: MRNA splicing protein - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 80
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1
Query: 205 RAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
+ + G + GFD +MN+VL E+V + K+ ++ +++++GN I
Sbjct: 31 KTINGKIIGFDEYMNIVLSEAVAKNKEVEKIK-NLILVKGNQI 72
>UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 107
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV----GMVVIRG 324
L+K + KK+ I G+ + G+L+G D +N +L + VE + G+ ++RG
Sbjct: 17 LEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTIKHGLYLLRG 76
Query: 325 NSI 333
++I
Sbjct: 77 DNI 79
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/42 (42%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Frame = +1
Query: 217 GVLRGFDPFMNLVLDESVE--ECKDGQR-XNVGMVVIRGNSI 333
GV++GFD +MN+VLD++ E K+ +R +VG +++RG +I
Sbjct: 44 GVIQGFDEYMNIVLDQASEVYTKKEVRRETSVGQLLLRGENI 85
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE-ECKD-GQRXNVGMVVIRGNS 330
+ + +++ + + L + R TG L GFD F+N+V+++ VE + D + + G +++ GN+
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVEYDAPDRAVKRHPGRMLLSGNN 68
Query: 331 I 333
I
Sbjct: 69 I 69
>UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein
F; n=13; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein F - Caenorhabditis elegans
Length = 85
Score = 35.9 bits (79), Expect = 0.18
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
P L K + KL G GVL D +MNL L + E + N+G ++IR N+
Sbjct: 11 PFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNLGEILIRCNN 70
Query: 331 II 336
++
Sbjct: 71 VL 72
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
+ K +++K+ I L + R G L GFD F+N++L+++VE
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVE 50
>UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 89
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 196 NAGRAVTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSI 333
N + G L GFD ++NLVL ++ E K R +G ++++G +I
Sbjct: 34 NTALRIEGTLSGFDQYINLVLTDTEEVYLKTNTRRKIGTILLKGENI 80
>UniRef50_Q3LW01 Cluster: MRNA splicing factor; n=1; Bigelowiella
natans|Rep: MRNA splicing factor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 82
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGF------DPFMNLVL---DESVEECKDGQ--RXNV 303
LKK+++K+++I + G + F D FMNLVL +E + + KD Q R +
Sbjct: 8 LKKYINKRINIVTKNYDRINGRYKKFYRLLAYDKFMNLVLSDVEEYINDKKDSQEIRRVL 67
Query: 304 GMVVIRGNSII 336
G++V+RG+ II
Sbjct: 68 GLMVLRGSEII 78
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 35.5 bits (78), Expect = 0.24
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +1
Query: 136 SKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-XNV 303
S+ P EL + + K+ + + + + G+L+GFD ++N+VL++ E +G+R +
Sbjct: 6 SQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEGRRVTKL 65
Query: 304 GMVVIRGNSI 333
+++ GN+I
Sbjct: 66 DQILLNGNNI 75
>UniRef50_Q7R4T3 Cluster: GLP_440_43387_42998; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_43387_42998 - Giardia lamblia
ATCC 50803
Length = 129
Score = 35.5 bits (78), Expect = 0.24
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
P+L ++ L++ G TG L D MN+V+ K+ R ++G+VV+RG
Sbjct: 5 PKLVNYVGSPLTVHALNGYVYTGTLLAIDRHMNMVISSCCCRVKESAR-SLGLVVLRGEE 63
Query: 331 I 333
+
Sbjct: 64 V 64
>UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 94
Score = 35.5 bits (78), Expect = 0.24
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV--GMVVIRG 324
P L K + + + + L G G L+ FD +MN+ L E+ EE ++G G ++IR
Sbjct: 26 PFLAKLVGQNVFVTLKWGMEYKGFLKSFDSYMNIEL-ENAEEWENGVMKGTLGGTILIRC 84
Query: 325 NSII 336
N+++
Sbjct: 85 NNVL 88
>UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 84
Score = 35.5 bits (78), Expect = 0.24
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 133 MSKAHPPE--LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVG 306
MS+ P+ ++ M+K++ +K+ G+ + GVL +D N++L + +E G N
Sbjct: 1 MSEKPMPQDYIRLSMEKRVKVKVQEGQELEGVLHAYDEHYNIILGDVLESIM-GLDKNGK 59
Query: 307 MVVIRGNSIIM 339
+ +R N I M
Sbjct: 60 FIPVRQNQIDM 70
>UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_167, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 138
Score = 35.5 bits (78), Expect = 0.24
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +1
Query: 163 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC--KDG-----QRXNVGMVVIR 321
+++D ++ I L GR + G FD +N++L E E K G + +GM+++R
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVR 68
Query: 322 GNSII 336
G++II
Sbjct: 69 GDNII 73
>UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 191
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 139 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 276
K +L +D ++ + + GR G L FD +MNLV+ + VEE
Sbjct: 7 KKKETKLSDLIDYRIRVATHDGRVYIGQLMAFDAYMNLVMGDCVEE 52
>UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Guillardia theta|Rep: Putative small nuclear
ribonucleoprotein E - Guillardia theta (Cryptomonas phi)
Length = 78
Score = 35.1 bits (77), Expect = 0.31
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 217 GVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
G L GFD FMNLV++ + E+ ++G V+I+G+SI+
Sbjct: 32 GNLIGFDEFMNLVIENTTEKKDSLIVRDLGYVLIKGDSIL 71
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE--ECKDGQ-----RXNVGMVV 315
++K+++ ++ + + R + G L FD MNLVL + E K G+ + ++G+++
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIM 60
Query: 316 IRGNSII 336
+RG +I+
Sbjct: 61 LRGENIV 67
>UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL
RIBONUCLEOPROTEIN; n=1; Encephalitozoon cuniculi|Rep: U6
snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN -
Encephalitozoon cuniculi
Length = 102
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR---XNVGMVVIRG 324
+ +K++++++ + L GR + GV++ FD F ++ LD +E R + +IRG
Sbjct: 11 DYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFIIRG 70
Query: 325 NSIIM 339
+I M
Sbjct: 71 ENITM 75
>UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 136
Score = 35.1 bits (77), Expect = 0.31
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 196 NAGRAVTGVLRGFDPFMNLVL--DESVEECKDGQRXNVGMVVIRGNSII 336
N + G + GFD FMN+ L E V KD +R +G ++++G++I+
Sbjct: 32 NVDFRIEGKIIGFDEFMNVTLADAEEVWTKKDNKRVELGRILLKGDNIV 80
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 34.7 bits (76), Expect = 0.41
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE---ECKDG-QRXNVGMVVIRG 324
L+ +++ +SI GR G L+GFD +N+++DE E G ++ +G+ +IRG
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRG 63
Query: 325 NSI 333
++I
Sbjct: 64 DNI 66
>UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 93
Score = 34.7 bits (76), Expect = 0.41
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 139 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC-KDGQRXNVGMVV 315
K + LK+ ++ + N+ + G L GFD +MNLVL +S E K+ R +G +
Sbjct: 17 KIYVSYLKERARLRVHLNDNSKMYMEGNLLGFDEYMNLVLGDSYEVYPKENTRVPLGTSL 76
Query: 316 IRGNSIIM 339
+RG + M
Sbjct: 77 LRGECVGM 84
>UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1;
Filobasidiella neoformans|Rep: Sm-like protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 95
Score = 34.7 bits (76), Expect = 0.41
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES------VEECKDGQ-------RX 297
+K + +++ IKL R VTGVL +D MN+V+ ++ V+ ++GQ R
Sbjct: 16 VKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEGQPLPPRIERR 75
Query: 298 NVGMVVIRGNSIIM 339
M+ +RG+ +I+
Sbjct: 76 TAEMLFVRGDGVIL 89
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
L++ + K + +KL R+V G ++GFD MN+V+ E+ E + N
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATEVIEQQSNNN 58
>UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;
Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein
F - Drosophila melanogaster (Fruit fly)
Length = 88
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
P L K + +KL G+ G L D +MN+ L + E + N+G V+IR N+
Sbjct: 11 PFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCNN 70
Query: 331 II 336
++
Sbjct: 71 VL 72
>UniRef50_Q8SQK1 Cluster: U6 snRNA-ASSOCIATED RIBONUCLEOPROTEIN;
n=1; Encephalitozoon cuniculi|Rep: U6 snRNA-ASSOCIATED
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 94
Score = 34.3 bits (75), Expect = 0.54
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 178 KLSIKLNAGRAVTGVLRGFDPFMNL-VLDESVEECKDGQRXNVGMVVIRGNSI 333
++S+ L AG V+G L G DP++NL +LD + G ++ + IRG+SI
Sbjct: 14 RVSVMLKAGVYVSGRLGGIDPYLNLSLLDVRILSSHPG-LSSISVCSIRGSSI 65
>UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 80
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
+ K + ++ + +N G+ TG L GFD ++N+VL+E E
Sbjct: 21 IDKCVGSQIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTE 59
>UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 109
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 264
P LK +++KK+ I GR + L GFD NLVL +
Sbjct: 3 PLLKDYLNKKIVIITTEGRCLLATLEGFDKNTNLVLSQ 40
>UniRef50_A6S4U0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 157
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 160 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLD--ESVEECKDGQRXNVGMVVIRGNSI 333
K +D +++++L + G+L+ D ++N+ LD + VEE K +V V IRG+ +
Sbjct: 67 KTLVDHEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNVFIRGSVV 126
>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
putative; n=1; Babesia bovis|Rep: Small nuclear
ribonucleoprotein F, putative - Babesia bovis
Length = 83
Score = 33.9 bits (74), Expect = 0.72
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 175 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV-GMVVIRGNS 330
K + +KLN G G+L D MNL ++ + E C DG+ G IRGN+
Sbjct: 16 KPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYC-DGELVKAYGDSFIRGNN 67
>UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Thermofilum pendens Hrk 5|Rep: Like-Sm
ribonucleoprotein, core - Thermofilum pendens (strain
Hrk 5)
Length = 100
Score = 33.9 bits (74), Expect = 0.72
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSI 333
L+ K + +KL G G LR D MNLVLD++ E + + +G V IRG+++
Sbjct: 7 LRNQSGKGVFVKLKDGSEYMGKLRMTDAAMNLVLDDAKELTETNKVVAQLGTVFIRGSNL 66
Query: 334 I 336
+
Sbjct: 67 L 67
>UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Pyrococcus furiosus
Length = 76
Score = 33.9 bits (74), Expect = 0.72
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSI 333
+ K +DK + + L G G L G+D +N+VL + E +DG+ G +VIRG+++
Sbjct: 9 IHKSLDKDVLVILKKGFEFRGKLIGYDIHLNVVL-ANAELLQDGEVVKKYGKIVIRGDNV 67
Query: 334 I 336
+
Sbjct: 68 L 68
>UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 89
Score = 33.5 bits (73), Expect = 0.95
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
L++ + K+ IKL R + G L D F NLVL+++VE
Sbjct: 16 LREMIGHKVFIKLENNRELEGTLMSLDQFGNLVLNDTVE 54
>UniRef50_A2DLB2 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 76
Score = 33.5 bits (73), Expect = 0.95
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
L+ + K + L+ G + G L D NLVL ++VE + + IRGN ++
Sbjct: 11 LQATLQKPTHVVLSTGSQLIGTLCTIDALFNLVLRDAVEMSNGNEVGKYQSIFIRGNQVV 70
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 33.5 bits (73), Expect = 0.95
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
L +DKK+ + L + G+LR +D F NLVL E E
Sbjct: 97 LLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHE 135
>UniRef50_Q4JAY5 Cluster: Conserved Archaeal protein; n=4;
Sulfolobaceae|Rep: Conserved Archaeal protein -
Sulfolobus acidocaldarius
Length = 144
Score = 33.5 bits (73), Expect = 0.95
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 127 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFD--PFMNLVLDESVEECKDGQRXN 300
+++S+ +L +DK + +KLN + +GVL F+ PFM +L+ KD
Sbjct: 1 MSVSRRISGDLGSLLDKTIIVKLNNNKVYSGVLSSFEVSPFMVSLLN-----AKDNDNNM 55
Query: 301 VGMVVIRGNSI 333
V+I GN I
Sbjct: 56 YYKVIINGNMI 66
>UniRef50_A3QER8 Cluster: DNA polymerase III, alpha subunit; n=1;
Shewanella loihica PV-4|Rep: DNA polymerase III, alpha
subunit - Shewanella loihica (strain BAA-1088 / PV-4)
Length = 1078
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 142 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVI 318
A P E+ + L+ GR V LRG PF+ + +C+ GQ +V VV+
Sbjct: 937 APPSEMAAMQSDYRHLGLSLGRHVMAQLRGLAPFVGCRHASELADCRHGQLVHVAGVVV 995
>UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila
melanogaster|Rep: RE61341p - Drosophila melanogaster
(Fruit fly)
Length = 114
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 126 HYNVKSTSTRIEKIHGQKIVNKAECGSRCYRCVARF*SIHE 248
H NV+ S R EKIHGQ + E +R R AR S+HE
Sbjct: 24 HQNVEGPSPRGEKIHGQAHDAETERRTRGDRYFARLRSLHE 64
>UniRef50_Q6CX51 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome A of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 91
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVI 318
L + + L I L+ R++TG L D NL+LDE VE DG +G+V +
Sbjct: 9 LHDLLSETLYINLDQKRSLTGKLIAIDCKANLLLDEVVEN-NDGHVRKMGLVSV 61
>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 187 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR-XNVGMVVIRGNSI 333
++L +G + G+L D +MNL L E V+ DG + + + +RG++I
Sbjct: 77 VELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGSTI 126
>UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep:
Sm-like protein - Sulfolobus acidocaldarius
Length = 87
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE--ECKDGQRXNVGMVVIRGNS 330
LK ++K + +KL G G L D MNLVL + E E G V+IRG++
Sbjct: 12 LKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLIRGSN 71
Query: 331 II 336
I+
Sbjct: 72 IL 73
>UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 91
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR-XNVGMVVIRGNSI 333
LK +++ + +K+ G G L D MN+VL E DG+ G V+IRG+ I
Sbjct: 15 LKSAVNQIVLVKIKDGHEYIGTLNMVDHTMNVVLSNCQEYGDDGKPIARYGKVLIRGSHI 74
Query: 334 I 336
+
Sbjct: 75 V 75
>UniRef50_UPI0000499412 Cluster: U6 snRNA-associated Sm-like
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein - Entamoeba histolytica
HM-1:IMSS
Length = 71
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 160 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
K+ + + SIKLN G G + D MN+VL+ ++E + IRGN+
Sbjct: 14 KEALFHECSIKLNDGTIFKGKMTLIDGLMNIVLENAIEYINGNKDNEYPECFIRGNN 70
>UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep:
F14D16.28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPF 243
L ++DKKL + L GR + G+LR FD F
Sbjct: 72 LAAYLDKKLLVLLRDGRKLMGLLRSFDQF 100
>UniRef50_Q98RT8 Cluster: Small nucleolar ribonucleoprotein G; n=1;
Guillardia theta|Rep: Small nucleolar ribonucleoprotein
G - Guillardia theta (Cryptomonas phi)
Length = 74
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
E+ F+ KK+++ L + G L GFD F N+V+ ++ + K +V+IRG+S+
Sbjct: 9 EISNFIQKKVNVILINQINLKGTLVGFDNFSNIVIKKN--QVKQENCFINEIVLIRGDSL 66
Query: 334 I 336
+
Sbjct: 67 V 67
>UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 112
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 181 LSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
+ I LN G + G L+ + MN L V KDGQ+ +RG++I+
Sbjct: 18 VEIHLNTGDSYRGTLKYVEDNMNCWLTNVVHTQKDGQQIKFDKTYVRGSNIL 69
>UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 107
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR---XNVGMVVIRGN 327
L++ ++ +++ G + G+L +D MNLVL + E +D Q+ +G++V+RG
Sbjct: 8 LQRLLNGLVTVTTVEGLSFQGILMNYDEHMNLVLRQVEEIPQDNQQREPKRIGLMVMRGC 67
Query: 328 SI 333
++
Sbjct: 68 NV 69
>UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor; n=1;
Candida glabrata|Rep: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 105
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 264
P LK++++K + + AG + VL G+D + NLV+ E
Sbjct: 3 PLLKQYLNKDIVVVTTAGEVMHVVLDGYDKYTNLVVKE 40
>UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 232
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
++ ++ +L I LN R + G L FD MNLVL +S E
Sbjct: 10 KMMSLINYRLRITLNDSRQIVGQLLAFDAHMNLVLADSQE 49
>UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear
ribonucleoprotein; n=2; Thermoprotei|Rep: 90aa long
hypothetical small nuclear ribonucleoprotein -
Sulfolobus tokodaii
Length = 90
Score = 32.7 bits (71), Expect = 1.7
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +1
Query: 127 ITMSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
I +K P LK +K + +KL G G L D MNLVL + + E ++G
Sbjct: 5 IVQAKIENPLKSLKTATNKIVLVKLKDGSEYVGRLEQSDGTMNLVLRDCI-ETREGTAEP 63
Query: 301 V---GMVVIRGNSII 336
V G V+IRG++I+
Sbjct: 64 VAKYGRVLIRGSNIL 78
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Frame = +1
Query: 202 GRAVTGVLRGFDPFMNLVLDESVE---ECKDGQR-----XNVGMVVIRGNSIIM 339
G + G + GFD FMN+V+DE+VE DG+ +G ++++G++I +
Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITL 89
>UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein F;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein F - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE----------ECKDGQRXNV 303
++ K+++ + + GR G FD +MN++L E++E E K+ +R ++
Sbjct: 7 KISKYINYTIKVTTIEGRNFVGKFLAFDKYMNMILSETIEKRTVINKKTREEKEIER-SL 65
Query: 304 GMVVIRGNSI 333
GM+++RG+ I
Sbjct: 66 GMMLLRGDCI 75
>UniRef50_Q5KWM7 Cluster: Hypothetical conserved protein; n=2;
Geobacillus|Rep: Hypothetical conserved protein -
Geobacillus kaustophilus
Length = 310
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 KHITMSKAHPPELKKFMDKKLSI-KLNAGRAVTGVLRGFDPFMNLVLDESVEECK-DGQR 294
+++ + HPPE+K++ ++ L + + GR V G + ++LDE VEE K DG R
Sbjct: 21 RYVEVKLGHPPEVKRWGERALPVGVVRDGRIVDG------ETLAMILDECVEEWKIDGHR 74
>UniRef50_Q9VLV1 Cluster: CG14532-PA; n=1; Drosophila
melanogaster|Rep: CG14532-PA - Drosophila melanogaster
(Fruit fly)
Length = 197
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 128 LQCQKHIHQN*KNSWTKNCQ*S*MRVALLPVCCAVL 235
LQ +H Q+ + W NCQ M LLP+CCAVL
Sbjct: 68 LQQPQH-QQDDSDLWLHNCQSKSMGRKLLPLCCAVL 102
>UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 95
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV-GMVVIRGNS 330
L + ++ +KLN G L+ D +MN+ L E EE G++ V G +RGN+
Sbjct: 18 LSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIAL-EKCEEWVHGKKKTVHGDAFVRGNN 75
>UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Rep:
SnRNP homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 69
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLD 261
L++ +++ ++++L G TGVL G+D MN+V++
Sbjct: 18 LEESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIE 52
>UniRef50_Q9FI15 Cluster: Similarity to small nuclear
ribonucleoprotein; n=6; Viridiplantae|Rep: Similarity to
small nuclear ribonucleoprotein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 254
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE-----ECKDGQRX 297
MS + ++ +F++ ++ + + GR + G FD MNLVL + E K ++
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60
Query: 298 N--------VGMVVIRGNSII 336
N +G+V++RG +I
Sbjct: 61 NEEREERRTLGLVLLRGEEVI 81
>UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putative;
n=6; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 113
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 178 KLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
K+SI++ G G + MN++L ++ + + G+ + V +RG++I+
Sbjct: 17 KVSIEVATGEVYHGTVEELQNNMNVLLKDATKTARGGKETKMDSVFVRGSNIV 69
>UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein,
putative; n=3; Aconoidasida|Rep: U6 small nuclear
ribonucleoprotein, putative - Theileria parva
Length = 77
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 175 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
K + +KLN G G L D MNL ++ + E + G IRGN++
Sbjct: 16 KPVLVKLNNGSDFKGTLASLDERMNLAMENTCEFLDGVMVKSYGDAFIRGNNV 68
>UniRef50_Q6CFJ1 Cluster: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8; n=1; Yarrowia
lipolytica|Rep: Similar to sp|O95777 Homo sapiens U6
snRNA-associated Sm-like protein LSm8 - Yarrowia
lipolytica (Candida lipolytica)
Length = 97
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEEC----KDGQRXNVGMVVIRG 324
L +++K +++ GR + G+L+G+D N++L + E + + ++G+ ++RG
Sbjct: 4 LSGYINKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYMLRG 63
Query: 325 NSI 333
+ I
Sbjct: 64 DCI 66
>UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 690
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 187 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR-XNVGMVVIRGNSI 333
++L G + G L D +MNL L E V+ DG + + + ++GN+I
Sbjct: 18 VELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIYVKGNNI 67
>UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf
protein; n=1; Mus musculus|Rep: PREDICTED: similar to
Snrpf protein - Mus musculus
Length = 209
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
P L K + +KL G G L D +MN+ L + E ++G V+IR N+
Sbjct: 132 PFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNN 191
Query: 331 II 336
++
Sbjct: 192 VL 193
>UniRef50_A1IGG1 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium|Rep: Putative uncharacterized
protein - Enterococcus faecium (Streptococcus faecium)
Length = 393
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -2
Query: 149 GCAFDIVMCFLKYYNTELMLLS----WIFVY*MNFQPIEFCQMNLTFLL 15
G +++ LK+YN +L +L+ W ++ +FQP E ++ T +L
Sbjct: 82 GLCIIMLLLLLKFYNPQLAVLTGAKNWFYIAGFSFQPTELVKIGYTLML 130
>UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:
SmE protein - Leptomonas collosoma
Length = 94
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSI 333
+ G L G+D FMN+VL ++ E K + ++G +++R +++
Sbjct: 45 IEGNLLGYDEFMNVVLGDATETNSKTKESTHLGKILLRSDNV 86
>UniRef50_Q6QA14 Cluster: Lsm8p; n=6; Trypanosomatidae|Rep: Lsm8p -
Trypanosoma brucei
Length = 129
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ 291
L +++ +++S+ GR + GVL D MNLVL E D +
Sbjct: 2 LSQYLRRRVSVVTVDGRYLVGVLHAADQLMNLVLTSCAERVFDDE 46
>UniRef50_A2FKH2 Cluster: 3'5'-cyclic nucleotide phosphodiesterase
family protein; n=1; Trichomonas vaginalis G3|Rep:
3'5'-cyclic nucleotide phosphodiesterase family protein
- Trichomonas vaginalis G3
Length = 1086
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 70 YTKIHDNNINSVL*YFKKHITMSKAHPPELKKFMD--KKLSIKLNAGRAVTGVL 225
YTK+ +N + S+ + K ++ S PP+L + D K+L+ L +A++GVL
Sbjct: 316 YTKLDENLLLSLAPFAVKSLSTSLHPPPDLPQLDDFEKRLAALLEIAQALSGVL 369
>UniRef50_A2EG20 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 158
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE-----ECKDGQ----RXNVG 306
+L KF++ ++ + ++ R G + FD N+VL + E K G+ + N+G
Sbjct: 8 KLSKFINSRVKVVISDHRYFVGQMLAFDTHSNIVLKDCEEYRRLNRRKAGELQEAKRNIG 67
Query: 307 MVVIRGNSII 336
++++RG +++
Sbjct: 68 LMILRGETVL 77
>UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_266,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 363
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 181 LSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
++++L G TG + + MN+ LDE +DG+ ++ V +RG+ I
Sbjct: 18 VTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQI 68
>UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145,
whole genome shotgun sequence; n=5; Eukaryota|Rep:
Chromosome undetermined scaffold_145, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 181 LSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
++++L G TG + + MN+ LDE +DG+ ++ V +RG+ I
Sbjct: 18 VTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQI 68
>UniRef50_A7DPN6 Cluster: Peptidase S8 and S53, subtilisin, kexin,
sedolisin precursor; n=1; Candidatus Nitrosopumilus
maritimus SCM1|Rep: Peptidase S8 and S53, subtilisin,
kexin, sedolisin precursor - Candidatus Nitrosopumilus
maritimus SCM1
Length = 1269
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 82 HDNNINSVL*YFKKHITMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVL 258
HD+ +N + ++ +S P E L+ F D+K I + + V FD FMN
Sbjct: 811 HDSILNKTDTFIPNYVKLSDVKPHEDLEDFFDEKNPIPDESSLMILNVNFPFDQFMNSTS 870
Query: 259 DESVEECK 282
D ++ K
Sbjct: 871 DVYADDLK 878
>UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20;
Euteleostomi|Rep: Small nuclear ribonucleoprotein F -
Homo sapiens (Human)
Length = 86
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNS 330
P L K + +KL G G L D +MN+ L + E ++G V+IR N+
Sbjct: 9 PFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNN 68
Query: 331 II 336
++
Sbjct: 69 VL 70
>UniRef50_UPI0000E49E77 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 105
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 124 HITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
H+T + P EL + S++ + G L+GFD +NL+LDES E
Sbjct: 10 HVTQLQVRPSELDLLSLQFDSVQQDVQ---LGTLKGFDQTINLILDESHE 56
>UniRef50_Q55A45 Cluster: Putative small nuclear
ribonucleoparticle-associated protein; n=2;
Dictyostelium discoideum|Rep: Putative small nuclear
ribonucleoparticle-associated protein - Dictyostelium
discoideum AX4
Length = 274
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE------ECKDG--QRXNVGM 309
++ ++++ ++ + + GR + G FD MN+V+ ++ E + K+ ++ +GM
Sbjct: 9 KMLQYINYRMRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIRQKGKEDREEKRTLGM 68
Query: 310 VVIRGNSII 336
++IRG +++
Sbjct: 69 ILIRGETVV 77
>UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 67
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 217 GVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSII 336
G L FD +MN++L++ E + ++ +G V IR N+++
Sbjct: 5 GTLVSFDEYMNILLNDCEEWIDNTKKGTLGKVFIRCNNVL 44
>UniRef50_Q4P8W1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 382
Score = 31.1 bits (67), Expect = 5.1
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +1
Query: 136 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE--CKDGQRX--NV 303
SKA +K F+ + + + GRA GV D N++L ++ E +G+ NV
Sbjct: 10 SKAVETIIKNFVGRTSIVHIPDGRAFRGVFICVDSGKNIILADTDETRLTPEGRTTIRNV 69
Query: 304 GMVVIRGNSII 336
GMV+I G ++
Sbjct: 70 GMVMIPGEYVV 80
>UniRef50_UPI0000499249 Cluster: U6 snRNA-associated Sm-like protein
LSm4; n=1; Entamoeba histolytica HM-1:IMSS|Rep: U6
snRNA-associated Sm-like protein LSm4 - Entamoeba
histolytica HM-1:IMSS
Length = 81
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGMVVIRGNSI 333
L+ ++++L G TG+L D MN+ L ++ G R +V ++++G SI
Sbjct: 8 LENSQGTSVTLELKNGFKYTGILDRCDRMMNIHLKNAILIKPSGDRFSVSKLIVKGISI 66
>UniRef50_O22305 Cluster: Peptide transporter; n=1; Lotus
japonicus|Rep: Peptide transporter - Lotus japonicus
Length = 574
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 38 DKIRWVGNSSNIQKSTTITLIPYYNILKS 124
DK+ W+GN+ N +S IT++P+++++ +
Sbjct: 509 DKLNWIGNNLNDSQS-RITIMPFFSVISA 536
>UniRef50_Q4V620 Cluster: IP06106p; n=3; Sophophora|Rep: IP06106p -
Drosophila melanogaster (Fruit fly)
Length = 121
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN-VGMVVIRGNS 330
+L+K++ + L I + GR + G D N+VL E +GQ +G V++ G
Sbjct: 44 KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYLVEGQEPRLLGNVMVPGQH 103
Query: 331 II 336
I+
Sbjct: 104 IV 105
>UniRef50_Q18183 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 2148
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 230 PRNTPVTARPAFSFIDNFLSMNFFNSGGCAFDIVMCFLKYYNTELML 90
P PVT RPA N SM ++S C F + +C + EL+L
Sbjct: 1709 PAGIPVTGRPALKLEMNCTSMKHYDSFDC-FRLKVCDMSVQLDELLL 1754
>UniRef50_A0CSI7 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 128
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 187 IKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN-VGMVVIRGNSI 333
I++ AG G L D FMN+ L KDG + + ++I+GNSI
Sbjct: 20 IEVKAGDTYDGKLELLDKFMNVKLTNVKHTSKDGNSFHGIKELLIKGNSI 69
>UniRef50_Q6CNK7 Cluster: Similar to sp|P14907 Saccharomyces
cerevisiae YJL041w NSP1 nuclear pore protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P14907
Saccharomyces cerevisiae YJL041w NSP1 nuclear pore
protein - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 780
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 269 TDSSRTKFMNGSKPRNTPVTARPAFSF 189
T ++T F GSK + P A+PAFSF
Sbjct: 311 TSGAKTGFSFGSKTEDKPTDAKPAFSF 337
>UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 93
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV-GMVVIRGNSI 333
+ K + K+ + + + G L GFD ++N+VL+ E +G + V +++ G+ +
Sbjct: 27 IDKSIGHKIQVLMTNDKEFKGTLIGFDDYVNMVLENVEEFDNEGPKGKVIKKMLLNGSQV 86
Query: 334 IM 339
M
Sbjct: 87 AM 88
>UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 193
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 175 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKD 285
+K++I+L G + GVL D +MNL L + ++ D
Sbjct: 13 QKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDSD 49
>UniRef50_A7D237 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Like-Sm
ribonucleoprotein, core - Halorubrum lacusprofundi ATCC
49239
Length = 80
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVL------DESVEECKDGQRXNV--GMV 312
L+ +++ +++ L G G+L G+D MN+V+ D+ V++ DG+
Sbjct: 9 LEASLEEPVTVHLKDGTTYYGILAGYDQHMNIVIEPETDVDDRVDDDLDGEFAVAIEDTT 68
Query: 313 VIRGNSII 336
+IRG++++
Sbjct: 69 IIRGDNVV 76
>UniRef50_Q10163 Cluster: Uncharacterized protein C26A3.08; n=38;
Fungi/Metazoa group|Rep: Uncharacterized protein
C26A3.08 - Schizosaccharomyces pombe (Fission yeast)
Length = 147
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
++ ++ L++ GR G L FD FMNLVL + E
Sbjct: 5 KMVSLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQE 44
>UniRef50_A3J9C5 Cluster: NAD-specific glutamate dehydrogenase; n=2;
Alteromonadales|Rep: NAD-specific glutamate
dehydrogenase - Marinobacter sp. ELB17
Length = 1634
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 13 YSRKVKFI*QNSMGWKFI*YTKIHDNNINSVL*-YFKKHITMSKAHPPELKKFMDKKLSI 189
Y R+++F NS FI T H N+ VL YF+ + P ++ +KL +
Sbjct: 679 YMRQIRF--SNSQ--TFIARTLFHHKNLTEVLLAYFEARFNPDNGYSPAKREATQQKLLV 734
Query: 190 KLNAG 204
+ NAG
Sbjct: 735 EFNAG 739
>UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 281
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRX-NVGMVVIRGNSI 333
LK + ++L G G L D +MN+ L E + KDG R + IRGN+I
Sbjct: 93 LKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTI 152
>UniRef50_A5B6G6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 237
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = -2
Query: 182 NFLSMNFF-NSGGCAFDIVMCFLKYYNT-------ELMLLSWIFVY*MNFQPIEFCQMNL 27
+F ++++ N G CA C K++ + EL L +W F+ N QP C+M +
Sbjct: 143 DFAAVSYLQNEGNCAAKWHSCAKKWFRSYEIPCEMELWLRNWEFLRFSNSQPFCSCEMRV 202
Query: 26 TFLLYST 6
T L T
Sbjct: 203 TILRNGT 209
>UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein,
putative; n=3; Plasmodium|Rep: Small nuclear ribonuclear
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 101
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
+ K + K+ I + + + G L GFD ++N+VL++ E
Sbjct: 16 MDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTE 54
>UniRef50_Q8IB34 Cluster: Ribonucleoprotein, putative; n=1;
Plasmodium falciparum 3D7|Rep: Ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 74
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Frame = +1
Query: 169 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLD-----------ESVEECKDGQRXNVGMVV 315
M++++ +K R + G L +D +N++L E+ EE N+ MV
Sbjct: 1 MEEEIFLKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKENDEETVKKMERNLDMVF 60
Query: 316 IRGNSIIM 339
+RG+SII+
Sbjct: 61 VRGDSIIL 68
>UniRef50_Q4UC24 Cluster: U6 snRNA-associated Sm-like potein,
putative; n=1; Theileria annulata|Rep: U6
snRNA-associated Sm-like potein, putative - Theileria
annulata
Length = 113
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 202 GRAVTGVLRGFDPFMNLVLDESVEEC--KDG--QRXNVGMVVIRGNSI 333
GR GVL+GFD NLVL +E D + +G+ ++RG+++
Sbjct: 27 GRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B,
putative; n=3; Eukaryota|Rep: Small nuclear
ribonucleoprotein B, putative - Theileria parva
Length = 155
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE----ECKDGQRXNV----GMV 312
++ ++ + + L R G L +D +MNLVL + E KD R V G V
Sbjct: 8 MQHWLQYNVRVTLKDNRKFVGTLVAYDKYMNLVLSDCEEFRMTLGKDKNRTEVKRTLGFV 67
Query: 313 VIRGNSII 336
++RG +I+
Sbjct: 68 LLRGENIV 75
>UniRef50_A2D8V4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 409
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 124 HITMSKAHPPELKKFMDK-KLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXN 300
H + + P K M+K + ++ + A +++T + FDPF NL+ + E +D +
Sbjct: 40 HQKLDEFAGPSAHKVMEKTQFNLSVRAIKSITS--KSFDPFRNLIKHNDIPETEDQIATH 97
Query: 301 VGMVVIRGNSII 336
V+ SI+
Sbjct: 98 SAFRVLSNISIL 109
>UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep:
ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 85
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
L + K +++KL++G G L D FMN+ L ++ E
Sbjct: 17 LSNIIGKPVNVKLHSGMLYQGTLESIDGFMNVALVDASE 55
>UniRef50_Q4WP21 Cluster: Small nuclear ribonucleoprotein SmB,
putative; n=2; Eukaryota|Rep: Small nuclear
ribonucleoprotein SmB, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 357
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 178 KLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
++ I L GR +TG + FD MNLVL ++ E
Sbjct: 134 RMRITLTDGRQMTGQMLAFDKHMNLVLADTEE 165
>UniRef50_Q9HLU6 Cluster: Amylopullulanase related protein; n=1;
Thermoplasma acidophilum|Rep: Amylopullulanase related
protein - Thermoplasma acidophilum
Length = 1641
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -2
Query: 200 AFSFIDNFLSMNFFNSGGCAFDIVMCFLKYYNTELMLLSWIFVY*MNFQPIEFCQMNLTF 21
A + + N SM +N AFDI ++ Y ++L+W VY +N + ++N+
Sbjct: 1532 AINLLMNSCSMYTYNITSSAFDISNPYIAYTQFGSIILAWHQVYNLN-NTVFAMRLNMGT 1590
Query: 20 LLYS 9
+L+S
Sbjct: 1591 MLFS 1594
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,402,997
Number of Sequences: 1657284
Number of extensions: 5985062
Number of successful extensions: 14622
Number of sequences better than 10.0: 195
Number of HSP's better than 10.0 without gapping: 14347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14612
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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