Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F19
(339 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0043 + 16747103-16747137,16747237-16747259,16748735-167488... 89 1e-18
07_03_1222 - 24983294-24983356,24983695-24983858,24985209-249852... 75 2e-14
08_01_0523 + 4556309-4556311,4556434-4556515,4557528-4557548,455... 50 4e-07
05_07_0342 + 29402867-29402906,29403012-29403052,29403146-294032... 43 5e-05
02_01_0576 - 4270808-4270871,4271548-4271612,4271717-4271754,427... 37 0.004
02_01_0209 - 1399613-1399622,1399719-1399764,1399849-1399927,140... 37 0.004
08_01_0328 + 2959014-2959055,2959336-2959398,2960871-2960949,296... 37 0.005
05_04_0169 - 18694418-18694453,18694516-18694627,18696095-186962... 31 0.23
07_01_0479 + 3606663-3607448 31 0.30
04_03_0736 - 19145428-19145474,19145608-19145721,19146707-191478... 29 0.70
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 29 0.93
11_06_0609 + 25444941-25444946,25445678-25445765,25446013-254460... 29 1.2
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 28 2.1
03_05_0290 - 22791338-22791925,22792012-22793196,22793835-227939... 27 3.8
07_03_0715 + 20889399-20890111,20890950-20891060,20891128-208913... 27 5.0
04_04_0572 - 26321059-26321510,26321629-26321824 27 5.0
08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701 26 8.7
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 26 8.7
>03_04_0043 +
16747103-16747137,16747237-16747259,16748735-16748856,
16748980-16749042
Length = 80
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +1
Query: 133 MSKA-HPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNVGM 309
MS++ PP+LKK+MDKKL IKLNA R + G LRGFD FMNLV+D +V E + ++GM
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTV-EVNGNDKTDIGM 59
Query: 310 VVIRGNSIIM 339
VV+RGNS++M
Sbjct: 60 VVVRGNSVVM 69
>07_03_1222 -
24983294-24983356,24983695-24983858,24985209-24985231,
24985340-24985374
Length = 94
Score = 74.5 bits (175), Expect = 2e-14
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 15/84 (17%)
Frame = +1
Query: 133 MSKA-HPPELKKFMDKKLS--------------IKLNAGRAVTGVLRGFDPFMNLVLDES 267
MS++ PP+LKK+MDKKL +KLNA R V G LRGFD FMNLV+D +
Sbjct: 1 MSRSGQPPDLKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMNLVVDNT 60
Query: 268 VEECKDGQRXNVGMVVIRGNSIIM 339
V E ++ ++GMVVIRGNS++M
Sbjct: 61 V-EVNGNEKNDIGMVVIRGNSVVM 83
>08_01_0523 +
4556309-4556311,4556434-4556515,4557528-4557548,
4557824-4557895,4558259-4558311,4558721-4558807
Length = 105
Score = 50.4 bits (115), Expect = 4e-07
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 15/77 (19%)
Frame = +1
Query: 154 ELKKFMDKKLSIKLNAGR-------AVTGVLRGFDPFMNLVLDESVE---ECKD-----G 288
+L KF+DK + +KL GR +VTG L+G+D +NLVLDE+VE E D G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVSFYGQSVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKLSG 69
Query: 289 QRXNVGMVVIRGNSIIM 339
+ +G++V RG ++++
Sbjct: 70 KTRQLGLIVCRGTAVML 86
>05_07_0342 +
29402867-29402906,29403012-29403052,29403146-29403220,
29403523-29403648,29404195-29404247,29404385-29404475
Length = 141
Score = 43.2 bits (97), Expect = 5e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 151 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
P L+ +D+ +S+ N GR + G LRGFD N++LDES E
Sbjct: 6 PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>02_01_0576 -
4270808-4270871,4271548-4271612,4271717-4271754,
4272060-4272147,4272507-4272625,4273682-4273721
Length = 137
Score = 37.1 bits (82), Expect = 0.004
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 127 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQ-RXNV 303
+T+ P L K + +KL G G L D +MNL L + EE DGQ N+
Sbjct: 53 VTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQL-ANTEEYIDGQFSGNL 111
Query: 304 GMVVIRGNSII 336
G ++IR N+++
Sbjct: 112 GEILIRCNNVL 122
>02_01_0209 -
1399613-1399622,1399719-1399764,1399849-1399927,
1400004-1400162,1400988-1401050,1401154-1401222
Length = 141
Score = 37.1 bits (82), Expect = 0.004
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 226 RGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+GFD +MNLVLDE+ E K R ++G ++++G++I +
Sbjct: 97 KGFDEYMNLVLDEAEEINIKKDTRKSLGRILLKGDNITL 135
>08_01_0328 +
2959014-2959055,2959336-2959398,2960871-2960949,
2961038-2961083,2961566-2961671
Length = 111
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 211 VTGVLRGFDPFMNLVLDESVE-ECKDGQRXNVGMVVIRGNSIIM 339
+ G + GFD +MNLVLD++ E K R ++G ++++G++I +
Sbjct: 30 IEGRIIGFDEYMNLVLDDAEEINVKKDTRKSLGRILLKGDNITL 73
>05_04_0169 -
18694418-18694453,18694516-18694627,18696095-18696243,
18696980-18697033,18697110-18697222,18697323-18697374
Length = 171
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE--SVEECKDGQR-XNVGMVVIRGN 327
+ + + K+ + + + + G L GFD ++N+VL++ E +G+R + +++ GN
Sbjct: 84 IDRCIGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEGRRITKLDQILLNGN 143
Query: 328 SI 333
+I
Sbjct: 144 NI 145
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 133 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 273
MS ++ +F++ ++ + + GR + G FD MNLVL + E
Sbjct: 1 MSNPKGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEE 47
>04_03_0736 -
19145428-19145474,19145608-19145721,19146707-19147870,
19150251-19150383
Length = 485
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 217 GVLRGFDPFMNLVLDESVEECKDGQRXN-VGMVVIRGNSII 336
G+L D +MN+ ++++ EE +GQ N G IRGN+++
Sbjct: 433 GILACLDGYMNIAMEQT-EEYVNGQLKNKYGDAFIRGNNVL 472
>01_01_1089 -
8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 157 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR-XNVGMVVIRGNSI 333
LK + ++L G G L D +MN+ L E + KDG + + IRGN+I
Sbjct: 7 LKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYIRGNTI 66
>11_06_0609 +
25444941-25444946,25445678-25445765,25446013-25446048,
25446069-25446106,25446219-25446283,25446622-25446685
Length = 98
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 217 GVLRGFDPFMNLVLDESVEECKDGQ-RXNVGMVVIRGNSII 336
G L D +MNL L + EE DGQ N+G ++IR N+++
Sbjct: 44 GYLVSVDSYMNLQL-ANTEEYIDGQFSGNLGEILIRCNNVL 83
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 235 DPFMNLVLDESVEECKDGQRXNV 303
DPF N ++ + +EEC D QR +
Sbjct: 466 DPFGNYLVQKLLEECSDDQRTRI 488
>03_05_0290 -
22791338-22791925,22792012-22793196,22793835-22793904,
22795918-22795979
Length = 634
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 76 KIHDNNINSVL*YFKKHITMSKAHPPELKKFMD-KKLS 186
K HD ++ Y K+H ++SK+ L + MD KKLS
Sbjct: 425 KNHDGLYRAIDMYLKEHPSLSKSEKKALCRLMDCKKLS 462
>07_03_0715 +
20889399-20890111,20890950-20891060,20891128-20891338,
20891414-20891474,20891719-20891956,20892046-20892196,
20892415-20892703,20893464-20894207,20894720-20894851,
20895728-20895965,20896159-20896246,20896422-20896697
Length = 1083
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 246 HEWIKTAQHTGN 211
H WIKT QH GN
Sbjct: 874 HRWIKTQQHRGN 885
>04_04_0572 - 26321059-26321510,26321629-26321824
Length = 215
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 237 IKTAQHTGNSATRIQLY*QFFVHEFFQFWWMCF*HCNVLFKIL 109
+KTA+ + N Q Y Q + F+FW+M F V K L
Sbjct: 165 VKTAKPSENKHRPEQKYVQVVTDDGFEFWFMGFVSFQVTLKNL 207
>08_02_0698 - 20151374-20151526,20153024-20153110,20153327-20153701
Length = 204
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 218 PVTARPAFSFIDNFLSMNFFNSGGCAFD---IVMCFLKYYN 105
PVTA A S++D FLS++ + + I MCF +N
Sbjct: 134 PVTAYLAVSYMDRFLSLHRLPAYTLIIECTNICMCFFSGFN 174
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 139 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRXNV 303
KA L ++ D ++ + AG A P MNLV E V+ G R +V
Sbjct: 17 KAGLHRLFRYADGVDALLMAAGAAGAAASGAAQPLMNLVFGEVVDAFGSGSRDDV 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,803,150
Number of Sequences: 37544
Number of extensions: 155631
Number of successful extensions: 344
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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