Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F16
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 6e-37
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 6e-37
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 150 6e-37
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 150 6e-37
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 129 2e-30
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 127 7e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 125 3e-29
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 59 2e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 5e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 41 6e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 38 0.004
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.028
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.15
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.26
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 31 0.79
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.79
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 2.4
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 3.2
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 3.2
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.2
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 28 4.2
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 4.2
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 5.6
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 517 IQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 226 IQKESTLHLVL 258
I++ S LHL L
Sbjct: 136 IKQGSILHLFL 146
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 129 bits (311), Expect = 2e-30
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1
Query: 235 ESTLHLVLRLXGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 414
ESTLHLVLRL GG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
Query: 415 KKXI 426
KK +
Sbjct: 74 KKKL 77
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 127 bits (306), Expect = 7e-30
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 226 IQK 234
IQK
Sbjct: 139 IQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 125 bits (301), Expect = 3e-29
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +1
Query: 151 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLXGGTIEPSLRILAMKYNCEKMI 330
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL GG IEPSLRILA KYNC+KMI
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMI 61
Query: 331 CR 336
CR
Sbjct: 62 CR 63
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 235 ESTLHLVLRLXGGTIEPSLRILAMKYNCEKMICR 336
ESTLHLVLRL GG IEPSLRILA KYNC+KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 59.3 bits (137), Expect = 2e-09
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 228
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 229 QKESTLHLVLRLXGGTIEPSLRI 297
+TLHL++RL GG P+ R+
Sbjct: 133 FAGATLHLIVRLLGGEC-PTYRL 154
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 31 IGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLED 201
I + + I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D
Sbjct: 62 IKSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILND 121
Query: 202 GRTLSDYNIQKES 240
L +YNI ++S
Sbjct: 122 DNPLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 31 IGATQLQIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 207
+G Q+F T TL +D + +K++I+ K GIP D QRL F K+L D
Sbjct: 1 MGEETFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDA 60
Query: 208 TLSDYNIQK 234
TL+ N+++
Sbjct: 61 TLAKVNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 222
+++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 223 NIQKESTLHLVLR 261
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 70 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 249
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 250 LVLRLXGGTIE 282
+ L G +E
Sbjct: 104 YLYLLSGRNVE 114
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 142 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+ ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 148 GIPPDQQRLIFAGKQLEDGRTLSDYN 225
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 32.3 bits (70), Expect = 0.26
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NI 228
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + + ++
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 229 QKESTLHLVLRLXGGTIEPSLR 294
QK + + V L ++ LR
Sbjct: 245 QKATFVVAVNPLWEHFVDACLR 266
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.60
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 252
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 444 GYYLIXDXLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 322
G ++ L G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.79
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 55 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 234
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 235 ESTLHLVLR 261
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 231
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 232 KESTLHLVLRLXGGTI 279
+E L+ ++ GT+
Sbjct: 565 RELELYRQIKDENGTV 580
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 73 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 361 EDEDGHSIYGKSFSHSYTSWRECEGKV 281
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
LQ ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 226 IQ 231
+Q
Sbjct: 774 LQ 775
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 170 VSSLPGNN*KMAALFQTITSRKNPHFTWF 256
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 411 SQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKG 286
S + LC+ +G+ + GIAF A L ++ G+NA+G
Sbjct: 252 SLLAQTLKLCIPKIGAFVIVYGIAFFAYAQLACLVFGQNAEG 293
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 49 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYN 225
+I V+ TGK+I + E I++ K+Q + + Q F G ++ + RTL+ +
Sbjct: 439 KILVRGKTGKSIVDDKEMDKEIDSFDRKVQIERSV----QETDFRGSKVSNNNRTLAGQD 494
Query: 226 IQKESTLHLVLRLXGGTIEP 285
K HL + G + P
Sbjct: 495 TPKSLDDHLSVASLGQKLSP 514
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 331 CRKCYARLHPRATNCRKTKCGHTNNLRPKKXI 426
CRK Y LHP T C C N R KK +
Sbjct: 21 CRKVY--LHPLVTGCGHVLCTKCYNKRSKKHL 50
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
LQ ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 226 IQ 231
+Q
Sbjct: 70 LQ 71
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 313 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 414
N + ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 PPDQQRLIFAGKQ-LEDGRTLSDYNIQKESTLHLVLRLXGGTIEPSLRILAMKYNCEKMI 330
PP Q+ + G + GR ++ + + G L N + ++
Sbjct: 381 PPKQRAIPLEGSTGMSGGRMTEEFIRAIRDAKKVSQHIASGGKVSDLPPPQYSENPDYVL 440
Query: 331 CRKCYARLHPRATNCRKTKCGHTNNLRP 414
CR C R +P KC +T N RP
Sbjct: 441 CRYCQRRFNPTVAERHIPKCANTTN-RP 467
>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 168 LLVWRNT-FLVLDFSFDIFDSVGSFHLQCNGLPRKGFDEYLQLCCSYEK---RAWK 13
L +W T FL+ F + +LQ G +GF +L CC E+ R WK
Sbjct: 820 LRIWGTTRFLLYAFGDTTHNETWMVYLQGIGDSGQGFANFLLFCCLTERFKTRLWK 875
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 198
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,205,622
Number of Sequences: 59808
Number of extensions: 350940
Number of successful extensions: 959
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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