Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F16
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 235 2e-62
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 235 2e-62
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 153 6e-38
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 152 1e-37
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 152 1e-37
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 97 7e-21
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 86 2e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 2e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 1e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 1e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 47 7e-06
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 45 3e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.001
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 38 0.003
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 36 0.018
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 36 0.018
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.032
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.056
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 34 0.075
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 3.7
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 28 4.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 235 bits (574), Expect = 2e-62
Identities = 111/127 (87%), Positives = 117/127 (92%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 405
IQKESTLHLVLRL GG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 406 LRPKKXI 426
LR KK +
Sbjct: 121 LRIKKKL 127
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 235 bits (574), Expect = 2e-62
Identities = 111/127 (87%), Positives = 117/127 (92%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 405
IQKESTLHLVLRL GG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 406 LRPKKXI 426
LR KK +
Sbjct: 121 LRIKKKL 127
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 153 bits (372), Expect = 6e-38
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 226 IQKESTLHLVLRLXGGTI 279
IQKESTLHLVLRL GG I
Sbjct: 821 IQKESTLHLVLRLRGGDI 838
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 150 bits (363), Expect = 7e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 150 bits (363), Expect = 7e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 96.3 bits (229), Expect = 1e-20
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 186
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 152 bits (369), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 226 IQKESTLHLVLRLXGG 273
IQKESTLHLVLRL GG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 152 bits (369), Expect = 1e-37
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 226 IQKESTLHLVLRLXGGTI 279
IQK+STLHLVLRL GG I
Sbjct: 821 IQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 97.1 bits (231), Expect = 7e-21
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 231
I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 3 IKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVL 62
Query: 232 KESTLHLVLRLXGG 273
S LHLVL L GG
Sbjct: 63 GGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +1
Query: 43 QLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
+L + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 223 NIQKESTLHLVLR 261
NI+ E +HLV R
Sbjct: 220 NIRDEDIIHLVSR 232
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 247 HL 252
L
Sbjct: 152 RL 153
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 31 IGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 153
+ + + + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 54 VDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 75.4 bits (177), Expect = 2e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 156
+QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 231
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 232 KESTLHLVLRLXGG 273
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 231
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 232 KESTLHLVLRLXGG 273
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 43 QLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
+ QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 223 NIQKESTLHLVLR 261
NIQK ST+ + R
Sbjct: 212 NIQKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 216
++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 217 DYNIQKESTLHL 252
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI 153
+KT TGK IT+E S VK +++DK+G+
Sbjct: 5 IKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 43 QLQIFVKTLTGKTITLEV 96
++ +FVKT TGKTIT+ +
Sbjct: 180 EIDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +1
Query: 43 QLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
+ Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +Y
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
Query: 223 NIQKESTLHLVLRL 264
NI ST+ L R+
Sbjct: 97 NISNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 189
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +1
Query: 70 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 249
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 250 L 252
L
Sbjct: 241 L 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 88 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 264
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHL 268
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 247 HLVLRLXGG 273
+L ++ GG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 247 HLVLRLXGG 273
+L ++ GG
Sbjct: 644 YLQVKERGG 652
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 88 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 4 VFFFPSTFFIGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLI 177
VF F S L + +TLT LE+ TI VKA + ++G P+ Q+LI
Sbjct: 38 VFLFCSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLI 97
Query: 178 FAGKQLED 201
+ GK L+D
Sbjct: 98 YNGKILDD 105
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +1
Query: 40 TQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 219
T +++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 220 YNIQKESTLHLVLRLXGG 273
I T+HLV R G
Sbjct: 79 AGISDGQTVHLVDRGPSG 96
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +1
Query: 40 TQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 219
T +++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 220 YNIQKESTLHLVLRLXGG 273
I T+HLV R G
Sbjct: 79 AGISDGQTVHLVDRGPSG 96
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +1
Query: 64 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 243
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 244 LHLVLR 261
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.056
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +1
Query: 61 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 240
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 241 TLHLV 255
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.075
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 31 IGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 210
IG+ ++ V L G I +E+++ DTI V + G+ +QRL+ K+L+ +T
Sbjct: 178 IGSKNIKFNV-ILHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQT 236
Query: 211 LSDYNIQKESTL 246
L + I+ S +
Sbjct: 237 LEEAGIKDGSVI 248
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 31 IGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
IG LQ+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1144 IGEDVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 331 CRKCYARLHPRATNCRKTKCGHT 399
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 88 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDYNIQK 234
+KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D IQ+
Sbjct: 5 IKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDVKIQE 59
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 63 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 164
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 63 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 164
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 63 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 164
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 187 KQLEDGRTLSDYNIQKESTLHLVLRLXGGTIEPSLRILAMK 309
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,988,372
Number of Sequences: 27780
Number of extensions: 252406
Number of successful extensions: 715
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -