Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F15
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.9  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   5.9  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   5.9  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   5.9  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   5.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.9  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   7.8  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   7.8  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   7.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 266 PDLLSYFAIVXNESKARVKFNLM 334
           P+LL YFA +    K + + NL+
Sbjct: 830 PNLLRYFASIATNPKEQAQLNLL 852


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 246 QESRCWFISHSYFV 205
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 82  SSLSNNTIHNNNYKY 96


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 82  SSLSNNTIHNNNYKY 96


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 83  SSLSNNTIHNNNYKY 97


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 83  SSLSNNTIHNNNYKY 97


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 83  SSLSNNTIHNNNYKY 97


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 519 STTKNSTIINKNYKF 563
           S+  N+TI N NYK+
Sbjct: 83  SSLSNNTIHNNNYKY 97


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 350 PCGPPPEKPED*TLRF 397
           PC  PP  P++ T+ F
Sbjct: 313 PCTQPPSAPQNLTVNF 328


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 78  TLAVYTISTSILPLKIKWVKD 140
           T    +++   LPL I W+KD
Sbjct: 628 TTLTCSVTRGDLPLSISWLKD 648


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 62  LNXNINFSSLYDFNKHLAFKNKMGERYNIH 151
           L+ N N+S+  ++N +  + N     YNI+
Sbjct: 85  LSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 604 VKCLTILFLYTNLF 645
           + C+ ++FLY N+F
Sbjct: 354 IPCIIMVFLYYNIF 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,265
Number of Sequences: 438
Number of extensions: 3282
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)