Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F09
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.8  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   7.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 323 GSSPESRCASAGSNQTSRYRRIKTSGSSQWRRLQ 222
           GSS +   +   S+ T +    K   SS WR+L+
Sbjct: 190 GSSGDDLSSEWDSDYTDKSNEKKIPKSSGWRKLR 223


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 607 PLYKKPKIKLVMDDANRSDLH 545
           P+Y  P +    D +N +D+H
Sbjct: 73  PIYPSPMVDFGYDISNYTDVH 93


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 140 DLKSQLEGFNTSCLRDVDTNEKIV 211
           +LKS L    + C++++ T ++I+
Sbjct: 21  ELKSGLHTVQSVCMKEIGTAQQII 44


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 607 PLYKKPKIKLVMDDANRSDLH 545
           P+Y  P +    D +N +D+H
Sbjct: 73  PIYPSPMVDFGYDISNYTDVH 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,702
Number of Sequences: 438
Number of extensions: 3511
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)