Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F09
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 38 0.004
At3g57780.1 68416.m06436 expressed protein 31 0.66
At2g02720.1 68415.m00214 pectate lyase family protein similar to... 31 0.66
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 30 1.2
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 1.2
At3g28770.1 68416.m03591 expressed protein 30 1.2
At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)... 30 1.2
At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam d... 29 2.7
At5g45520.1 68418.m05591 hypothetical protein 29 2.7
At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794... 29 3.5
At2g22795.1 68415.m02704 expressed protein 29 3.5
At1g23230.1 68414.m02906 expressed protein 29 3.5
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 28 4.7
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 4.7
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 28 4.7
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 28 6.2
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 8.2
At1g64570.1 68414.m07319 expressed protein 27 8.2
At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low... 27 8.2
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 182 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 361
R+ + NE+ + + E E+ K+ + EK Q+K + +E+N K+ +E +
Sbjct: 744 REKEENERRIKEAREKAELEQRLKATLEQEEK--ERQIKERQEREENERRAKEVLEQAEN 801
Query: 362 KNKFLNGIENFD-PTKLKHTETCEKNPLPTKDVIEQEKSAXXXXXXXXXANVSR 520
+ K +E + +LK T E+N ++ IE E+ A + R
Sbjct: 802 ERKLKEALEQKENERRLKETREKEENKKKLREAIELEEKEKRLIEAFERAEIER 855
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 191 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 370
+ NE+ E E+ K + +K + +LK T +E+N ++AIE E+++ +
Sbjct: 786 EENERRAKEVLEQAENERKLKEALE--QKENERRLKETREKEENKKKLREAIELEEKEKR 843
Query: 371 FLNGIENFD-PTKLKHTETCEKNPLPTKDVIEQEK 472
+ E + +LK E+ + ++ E+E+
Sbjct: 844 LIEAFERAEIERRLKEDLEQEEMRMRLQEAKERER 878
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 31.1 bits (67), Expect = 0.66
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 245 TQKSLFDGIEKFDSSQLKHTETQEK-NPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 421
TQ L D + + + TE +E N L D E EKE++K L+ I + + E
Sbjct: 58 TQSKLSDDDDHAVNDSSEKTEKEETINGLACDDEDEEEKEESKELDAIAHEKTDSVSSPE 117
Query: 422 TCE 430
TCE
Sbjct: 118 TCE 120
>At2g02720.1 68415.m00214 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 455
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 296 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 469
K +E P P+ + + EK+ FLNG K KNP+P K I +
Sbjct: 375 KQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAIRPQ 432
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 326 AGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRLQ---QTEA-QSFHWCRRHGDSWC*SL 159
A +S ++ AS +QT+R I+ G S+ + L+ T++ W +H D +
Sbjct: 27 AWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATAS 86
Query: 158 RADSSGLWRPWGGLCREGVSLSG 90
S LW G C + V LSG
Sbjct: 87 GDKSVRLWDARSGKCTQQVELSG 109
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 224 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKN 367
EDV EK D +++ D Q + ++EK +KD E EKEK+
Sbjct: 642 EDVVQEKDGDQEEDVVQEKDGDQEEDGVSKEKEQEKEKDPKEKEKEKD 689
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +2
Query: 194 TNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 373
TNE V E+V K + + EK +S K ET++ L + + KE++
Sbjct: 763 TNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGE 822
Query: 374 LNGIENFDPTKLKHTETCEKN 436
N + + + E EKN
Sbjct: 823 DNKEDKEESKDYQSVEAKEKN 843
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 242 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPD-KDAIEAEKEKNKFLNGIENFDPTKLKHT 418
KT ++ E+ K +E EK + KDA E + NK L+ EN D K +
Sbjct: 762 KTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSG 821
Query: 419 ETCEKNPLPTKD 454
E +++ +KD
Sbjct: 822 EDNKEDKEESKD 833
>At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)
nearly identical to SF2/ASF-like splicing modulator
Srp30 [Arabidopsis thaliana] GI:4775270
Length = 268
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 96 E*HSLPAKTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL--KTSPLRRPRSLYSTV 269
E S SP ++ R S++ P+ S +S R + ++ PL R RSLYS+V
Sbjct: 184 EYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPLSRSRSLYSSV 243
Query: 270 SRS 278
SRS
Sbjct: 244 SRS 246
>At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam
domain PF04931: DNA polymerase V
Length = 1306
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 302 TETQEKNPLPDKDAIEAEKEKNKFLNGIENFD 397
TE E + LPD ++ +K K + +N + N+D
Sbjct: 12 TELVENDNLPDSSIVKKKKSKTEKMNTVANYD 43
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 245 TQKSLFDGIEKFDSSQLKHTET-QEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 421
T K L D +E+ D + +T +E+ ++ + + ++ +N N + K KH E
Sbjct: 575 TDKKLKDLMEREDDQVQNYGQTSKEEKGNVEETGKQEDGDQGDGINEEANLEDGK-KHDE 633
Query: 422 TCEKNPLPTKDVIEQEK 472
E+ L + +V+E+EK
Sbjct: 634 GKEERSLKSDEVVEEEK 650
>At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794:
Domain of Unknown function
Length = 350
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 251 KSLFDGIEKFDSSQLK---HTETQEKNPLPDKDAIEAEKEKNKFL 376
++LF +F S Q+ H E +EK+ LP +A E KEK K L
Sbjct: 252 EALFSLASRFKSLQMMCKTHFEEEEKDLLPMVEAAEMGKEKQKKL 296
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Frame = +2
Query: 137 TDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQE 316
T+ K ++E + D +T EKI E E+T++ + EK +SS + TE +E
Sbjct: 471 TEAKEKVESSSQEKNEDKET-EKI-----ESSFLEETKEKEDETKEKEESSSQEKTEEKE 524
Query: 317 KNPLPDKDAIEAEKEKNKFLNGIE-----NFDPTKLKHTETCEKNPLPTKDVIEQEKS 475
++++ E+ K+K IE + + +K TET EK +++ +++++
Sbjct: 525 TETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKEN 582
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/98 (21%), Positives = 44/98 (44%)
Frame = +2
Query: 182 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 361
++ + EK+ S E ++T EK +SS L+ T+ +E +++ EK
Sbjct: 469 KETEAKEKVESSSQEKNEDKET--------EKIESSFLEETKEKEDETKEKEESSSQEKT 520
Query: 362 KNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 475
+ K +N + + + T+ E + ++ QE+S
Sbjct: 521 EEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES 558
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 224 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEK-NKFLNGIENFDP 400
ED EK + S + E+ ++ + E+ + DK+ + EKE+ + EN
Sbjct: 505 EDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETE 564
Query: 401 TKLK-HTETCEKNPLPTKDVIEQEKSA 478
TK K + + E+ + IE+E+SA
Sbjct: 565 TKEKEESSSQEETKEKENEKIEKEESA 591
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 452 PLWGAGSSRTFPCASA*WDRSSRC-RSGICSFPSP 351
PL+G + + P S W+R+ RC R I + PSP
Sbjct: 393 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSP 427
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 244 LLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 125
++ G+ +KHNL IG+D AG + + LQ C ++G
Sbjct: 41 IMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 310 SGEEPASGQRCYRSGEGKEQIPERHRELRSH*AEAHGNVREEPAPHKGRH*AREISLNHY 489
S E+ A R + + K + ER + SH ++ ++R EP H RE+ Y
Sbjct: 489 SAEQKAQEIRAAAASDFKTMLREREISINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEY 548
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 188 VDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKN 367
V + E +LP E +T SL FD E QE+ P + ++E EK +
Sbjct: 112 VVSEEDHLLPKKEYFSTAVALGSLKSRASVFDDEDYDEEEEQEEEQAPVEKSLETEKREP 171
Query: 368 KFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 469
L + + + + + +++ + T+DV E+E
Sbjct: 172 VVLKEDKALEYEE-EASILDKEDHMDTEDVQEEE 204
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 290 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 469
QL+ T+ + K P E +K K D K ++ E C P+P + ++E
Sbjct: 413 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEENAEDCFGEPVPERFIVEMR 467
Query: 470 KS 475
+S
Sbjct: 468 RS 469
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 290 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 469
QL+ T+ + K P E +K I D K ++ E C P+P + ++E
Sbjct: 359 QLEETDVKRKRNAPGPSPKEPAMKKQ-----ISEMDCDKEENAEDCFGEPVPERFIVEMR 413
Query: 470 KS 475
+S
Sbjct: 414 RS 415
>At1g64570.1 68414.m07319 expressed protein
Length = 1239
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 20 RVAECTNXLSPSSSKIY*FTTGLLR*VTLPPCKDLPKVATDLKSQLEGFNTSCLRDVDTN 199
++ CT L+PS +Y T+G T P P +A +S+ + FN S +R
Sbjct: 725 QILTCTQRLAPSFIPMYRHTSG-----TAPGASKAPIIARPYRSR-KVFNRSVVRLAPDL 778
Query: 200 EKIVLPSAEDVATE 241
+ LPS+ V ++
Sbjct: 779 PPVNLPSSVRVISQ 792
>At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low
similarity to DNA polymerase kappa [Mus musculus]
GI:14279087; contains Pfam profile PF00817:
ImpB/MucB/SamB family
Length = 785
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 247 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGE 122
GL G++ + +++ +T +AGV A L +VC D+ +
Sbjct: 214 GLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINK 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,769,405
Number of Sequences: 28952
Number of extensions: 289171
Number of successful extensions: 1110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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