Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F08
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1207 + 11511754-11513865                                         28   5.6  
09_06_0256 + 21887666-21888670                                         27   9.7  

>07_01_1207 + 11511754-11513865
          Length = 703

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 422 WISIAEELKSLNVXVTADQVXWKINALTKKYKDCID 529
           W+ + +E+  L V +  DQV    NAL   Y  C D
Sbjct: 324 WLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKD 359


>09_06_0256 + 21887666-21888670
          Length = 334

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 335 WTKNSTIMLLNLYXTKIHMLDNPKKKSKMWISIAEELKS 451
           W+++  + LL  Y  K  + +  K K   W+ IA E+ +
Sbjct: 26  WSESGIVRLLEAYEAKWLLRNRAKLKWSDWVDIAHEVSA 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,293,052
Number of Sequences: 37544
Number of extensions: 244715
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)