Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F08
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 33 0.23
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 33 0.23
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 33 0.23
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 29 2.1
Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical ... 29 2.8
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 27 8.7
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 344 NSTIMLLNLYXTKIHMLDNPKKKSKMWISIAEELKSLNVXVTADQVXWKINALTKKYKDC 523
N +ML NL K+ N +K + E+ +L + V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 524 I 526
+
Sbjct: 800 L 800
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 344 NSTIMLLNLYXTKIHMLDNPKKKSKMWISIAEELKSLNVXVTADQVXWKINALTKKYKDC 523
N +ML NL K+ N +K + E+ +L + V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 524 I 526
+
Sbjct: 800 L 800
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 344 NSTIMLLNLYXTKIHMLDNPKKKSKMWISIAEELKSLNVXVTADQVXWKINALTKKYKDC 523
N +ML NL K+ N +K + E+ +L + V DQV WK LTK D
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799
Query: 524 I 526
+
Sbjct: 800 L 800
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 377 TKIHMLDNPKKKSKMWISIAE-ELKSLNVXVTADQVXWKINALTKKYKDCIDNGQXAVSF 553
T + N +KK +M I +A EL+ N + V IN +DC +N + A+S
Sbjct: 640 TIFKLASNNEKKVEMLILLARAELERNNTEIALSAVEKSINLA----EDCENNEKLAISC 695
Query: 554 KYFNXMHQILXRYND 598
+ ++Q + +ND
Sbjct: 696 RLIAEIYQKIGGFND 710
>Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical
protein F35B12.1 protein.
Length = 325
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 420 IFDFFLGLSNICILVXYKFSNIIVEFFVQMIFXLFISFTSDXSCW 286
IFDF + ++ Y+F II+EFF + ++ +TS W
Sbjct: 126 IFDFKITFLITLLMFIYRFVKIILEFFHYIPLECWMVYTSYDLAW 170
>AC006617-1|AAF39770.2| 397|Caenorhabditis elegans Hypothetical
protein C39B5.6 protein.
Length = 397
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 516 KTALTMDXEQYLLSILMXCTKYXAATTIMVEIIXWL 623
++A+ + E LLS + C +Y A T V+I+ W+
Sbjct: 230 RSAVHIAEEPELLSFVKRCIRYKAPTVTPVDILYWM 265
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 SDVNEMNXQNIIWTKNSTIMLLNLYXTKIHMLDNPKKKSK----MWISIAEELKSLNVXV 466
S+V E ++ + K +T+ + NLY + + D +K++ + +SI +++ L
Sbjct: 140 SNVEEDLLRSYLKRKKATV-ITNLYDSLTNKRDEAMRKTREAKSLLVSIKDDISDLKYRT 198
Query: 467 TADQVXWKINALTKKYKDCIDN 532
V W++ + CI N
Sbjct: 199 QLKDVVWQMAWEESHMRRCISN 220
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 SDVNEMNXQNIIWTKNSTIMLLNLYXTKIHMLDNPKKKSK----MWISIAEELKSLNVXV 466
S+V E ++ + K +T+ + NLY + + D +K++ + +SI +++ L
Sbjct: 155 SNVEEDLLRSYLKRKKATV-ITNLYDSLTNKRDEAMRKTREAKSLLVSIKDDISDLKYRT 213
Query: 467 TADQVXWKINALTKKYKDCIDN 532
V W++ + CI N
Sbjct: 214 QLKDVVWQMAWEESHMRRCISN 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,709,691
Number of Sequences: 27780
Number of extensions: 266931
Number of successful extensions: 649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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