Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F06
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 518  VCRWRANATARPRQDIGSIDVRPHGDPARS 429
            +C W   AT     ++  +D+     PA+S
Sbjct: 1319 ICDWPEKATCDGTSNVNVVDIVTTAKPAQS 1348


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 171 INVYLKKKGFLISNEGGNKKVGERQHAQPSGACAS 67
           +N Y ++ GF  S+   +  V    H Q + A A+
Sbjct: 1   MNSYFEQSGFYGSHHHQSGSVAGHHHEQSAAAAAA 35


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 268 TVYLY*LLNECKFMINESKTLQDNCSLGANVL 173
           TV++  L+N CKF    +K L+ +  L ++ L
Sbjct: 734 TVWICTLMNRCKFSEFMTKLLEFDVKLQSDRL 765


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 125 PSFDIRNPFFFK 160
           P+ D+R+P FF+
Sbjct: 390 PAVDLRDPLFFR 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,332
Number of Sequences: 336
Number of extensions: 3411
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)