Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F06
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0640 + 25744048-25745021,25745128-25745273,25747870-257479...    28   7.5  
11_01_0407 + 3090880-3092010                                           28   7.5  
08_02_1379 - 26540012-26540587,26540804-26540995,26541777-265418...    27   9.9  

>11_06_0640 +
           25744048-25745021,25745128-25745273,25747870-25747945,
           25747996-25748230
          Length = 476

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 20/93 (21%), Positives = 35/93 (37%)
 Frame = +3

Query: 333 VLVGYLCDEFPWLGDVLGARASRPHEEXADXRRSRRITVRSDIDTADVLPRACRRVRAPP 512
           VL GY    + +   +   R+S+P  E AD  +     +  D       P A   V + P
Sbjct: 305 VLFGYSVSIYSYYTQIQTMRSSQPPSEKADAAKQELDEISGDKLEHSSSPAASTHVHSNP 364

Query: 513 TNTAT*PERNTGRXL*EQLAYPXKRSTQQTTNL 611
            ++A+            +   P  R  ++ T+L
Sbjct: 365 HSSASSSAEGVAPTPAPEYLLPVARKAEKNTHL 397


>11_01_0407 + 3090880-3092010
          Length = 376

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 496 AFARHLQTRLRNLSGTQDEXCESSWLTR 579
           AF RH+   L +L G +DE     W+ R
Sbjct: 11  AFQRHVAAHLADLRGGEDELLSIEWIRR 38


>08_02_1379 -
           26540012-26540587,26540804-26540995,26541777-26541812,
           26542255-26542488
          Length = 345

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 630 VVALSRGGWWSVELSVXSG 574
           VV+L+ G WWSVEL    G
Sbjct: 151 VVSLASGPWWSVELGRLDG 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,272,783
Number of Sequences: 37544
Number of extensions: 410641
Number of successful extensions: 1016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)