Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F06
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3129|AAF49172.1|  681|Drosophila melanogaster CG9619-PA...    42   7e-04
AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p pro...    30   3.2  
AY058606-1|AAL13835.1|  543|Drosophila melanogaster LD29875p pro...    30   3.2  
AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA...    30   3.2  
AE013599-2630|AAF57741.1|  543|Drosophila melanogaster CG5742-PA...    30   3.2  

>AE014296-3129|AAF49172.1|  681|Drosophila melanogaster CG9619-PA
           protein.
          Length = 681

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
 Frame = +1

Query: 445 PCGLTSILPM----SCRGRAVAFARHLQTRLRNLSGTQDEXCE--------------SSW 570
           PC + SI+P     SCRGRA AFAR L ++LR L     E  E              ++W
Sbjct: 20  PCSIISIIPTIGMSSCRGRAEAFARSLSSKLRTLGSQTTEEGEGNAEDEPIINGTSTNTW 79

Query: 571 LTRXNAQLNRPPTSPGQRDHDTFYDFE 651
           +   +++       P + + D+F+DF+
Sbjct: 80  VNSHDSEQTVTDLQPLRHESDSFFDFD 106


>AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p
           protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 286 VPLNKVTVYLY*LLNECKFMINESKTLQDNCSLGANVL 173
           +PL+ VT YL  L       I++S   + NCSL AN++
Sbjct: 394 LPLSTVTFYLKELTRWAHTYIDDSDAYKQNCSLKANLV 431


>AY058606-1|AAL13835.1|  543|Drosophila melanogaster LD29875p
           protein.
          Length = 543

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +3

Query: 327 RRVLVG--YLCDEFPWLGDVLGARASRPHEEXADXRRSRRITVRSDIDTADVLPRACRRV 500
           R+ L+G  Y C+ +   G +L  R  R H    D +++R I V +    A   P   RR 
Sbjct: 323 RKELIGGQYQCEIYTIQGLILKQRKRREHLSHEDLQKNRAI-VETITKGASQQPDT-RRS 380

Query: 501 RAPPTNTAT*PERNT 545
                +TAT PE NT
Sbjct: 381 SLGSQHTATPPETNT 395


>AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA,
           isoform A protein.
          Length = 611

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 286 VPLNKVTVYLY*LLNECKFMINESKTLQDNCSLGANVL 173
           +PL+ VT YL  L       I++S   + NCSL AN++
Sbjct: 394 LPLSTVTFYLKELTRWAHTYIDDSDAYKQNCSLKANLV 431


>AE013599-2630|AAF57741.1|  543|Drosophila melanogaster CG5742-PA
           protein.
          Length = 543

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +3

Query: 327 RRVLVG--YLCDEFPWLGDVLGARASRPHEEXADXRRSRRITVRSDIDTADVLPRACRRV 500
           R+ L+G  Y C+ +   G +L  R  R H    D +++R I V +    A   P   RR 
Sbjct: 323 RKELIGGQYQCEIYTIQGLILKQRKRREHLSHEDLQKNRAI-VETITKGASQQPDT-RRS 380

Query: 501 RAPPTNTAT*PERNT 545
                +TAT PE NT
Sbjct: 381 SLGSQHTATPPETNT 395


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,194,384
Number of Sequences: 53049
Number of extensions: 673794
Number of successful extensions: 1733
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)