Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F05
(638 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 297 1e-79
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 263 3e-69
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 210 8e-69
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 222 5e-57
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 189 4e-47
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 177 2e-43
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 176 3e-43
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 160 2e-38
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 159 7e-38
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 148 1e-34
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 142 5e-33
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 126 6e-28
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 105 1e-21
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 79 1e-13
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 72 1e-11
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 70 5e-11
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 62 1e-08
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 47 3e-04
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 46 6e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 45 0.001
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.022
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.022
UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 33 4.4
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 297 bits (730), Expect = 1e-79
Identities = 136/210 (64%), Positives = 160/210 (76%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
RLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 54 RLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKL 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
E+NVEPVD+GP AF C+LDVGL RTTTGARVFGAMKGAVDGGLN+
Sbjct: 114 GLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YM SLE++DE+SFKRQF +YIKLG+ A
Sbjct: 174 PHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRA 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKKDSV 634
+E IY KAH+AIR D +HK K +V
Sbjct: 234 DDLEDIYKKAHQAIRNDPTHKVTAKKSSAV 263
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 263 bits (644), Expect = 3e-69
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 210 bits (513), Expect(2) = 8e-69
Identities = 98/136 (72%), Positives = 110/136 (80%)
Frame = +2
Query: 230 EYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 409
EYNVE V+NGP AF CYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 410 KFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTAXAIEAIYXKAHEAIR 589
FNAE HRAHIFG HVA+YM +LE +D ++FKRQF +YIKLG+ A IE IY KAH+AIR
Sbjct: 158 TFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIR 217
Query: 590 ADXSHKKKELKKDSVK 637
AD S KK E + + K
Sbjct: 218 ADPSIKKVEKPEPAKK 233
Score = 73.3 bits (172), Expect(2) = 8e-69
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 112
R SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 54 RFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 222 bits (543), Expect = 5e-57
Identities = 108/210 (51%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 54 RITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTI 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPV-DNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLN 361
+YNVE D P F LD+GL RTTTG+++F MKG DGG+N
Sbjct: 114 GLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGIN 171
Query: 362 VPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVT 541
VPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQF K++ G+
Sbjct: 172 VPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLN 231
Query: 542 AXAIEAIYXKAHEAIRADXSHKKKELKKDS 631
A + A Y K H AIRAD S K+ K S
Sbjct: 232 ADNLVATYQKVHSAIRADASPAAKKAAKPS 261
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 189 bits (461), Expect = 4e-47
Identities = 89/207 (42%), Positives = 122/207 (58%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 63 RFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKY 122
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
+Y+VE D F C+LD GL RT+TGARVF A+KGAVDGGL++
Sbjct: 123 GLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDI 182
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PH+ KRF GYD + K + + +I G VAEY +++++ + F++ F KY+
Sbjct: 183 PHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQHFAKYLAEDFDP 242
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E + EAIR D +H+KKE K
Sbjct: 243 TELEDAMEEVFEAIREDPTHEKKERVK 269
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 177 bits (431), Expect = 2e-43
Identities = 90/197 (45%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Frame = +2
Query: 8 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 187
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 188 XXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNVP 367
Y+VE +N F LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 368 HSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGV 538
HS KRFPGY + + ++A+ HR IFG HVA YM L+++D + +++QF Y+K G+
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPERYRKQFSAYLKHGL 183
Query: 539 TAXAIEAIYXKAHEAIR 589
+ A+E +Y KAHE IR
Sbjct: 184 ESSALEDMYLKAHENIR 200
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 176 bits (429), Expect = 3e-43
Identities = 95/220 (43%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 77 RITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKL 136
Query: 185 XXXXX------XXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAV 346
+ + E D F LDVGL RTTTGARVFG +KGAV
Sbjct: 137 GIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAV 196
Query: 347 DGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQD---DEDSFKRQFX 517
DGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y+ ++++ + D QF
Sbjct: 197 DGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEEASSNPDEKCVQFS 256
Query: 518 KYIKLGVTAXAIEAIYXKAHEAIRADXSHK-KKELKKDSV 634
KY+ V +IE +Y KAH AIRAD S K+ KK+ V
Sbjct: 257 KYMAAKVLPESIEGMYKKAHAAIRADPSKSLPKKAKKEGV 296
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 160 bits (389), Expect = 2e-38
Identities = 87/210 (41%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXX 175
R +N + CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 54 RKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSL 113
Query: 176 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGG 355
E + + +LDVG+ RTTTG RVF A+KGA DGG
Sbjct: 114 NLDNQFIGVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGG 173
Query: 356 LNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLG 535
LN+PH RFPG +FN E R +I G+HVAEYM S++++D D +K F Y+K
Sbjct: 174 LNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKAHFNDYLKHK 230
Query: 536 VTAXAIEAIYXKAHEAIRADXSHKKKELKK 625
+ IE +Y AHE IR + K K+ K
Sbjct: 231 IDENNIEKMYLTAHEKIRKNPEKKAKKAGK 260
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 159 bits (385), Expect = 7e-38
Identities = 81/218 (37%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAAAY+TG
Sbjct: 343 RATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQI 402
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
+NV+ F LD GL RTTTG RVFG +KGA DGG+N+
Sbjct: 403 GLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINI 462
Query: 365 PHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIK 529
PHS RFPGY + ES K+ E H+A IFG H+ YM L+ ++F++QF K+ K
Sbjct: 463 PHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSK 522
Query: 530 L--GVTAXAIEAIYXKAHEAIRADXSHKKKELKKDSVK 637
++E ++ K H IR + K K D K
Sbjct: 523 TLEAAKVDSVEKLFTKVHAEIRKNPERVKSTKKNDKPK 560
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 148 bits (359), Expect = 1e-34
Identities = 80/207 (38%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 48 RITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAM 107
Query: 185 XXXXXXXXXXXXXXXEYNV-EPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLN 361
Y+V + +D A +LD+GL R+T GARVFGA+KGA D GLN
Sbjct: 108 SLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLN 165
Query: 362 VPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVT 541
VPHS +F G+ + F+A+ IFG +++EYM L D + +K QF YIK G+
Sbjct: 166 VPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMKQLRDGDPEKYKTQFSSYIKKGID 224
Query: 542 AXAIEAIYXKAHEAIRADXSHKKKELK 622
I IY A + I D + KKKE K
Sbjct: 225 PEEIPRIYKSAFDKIAEDPTRKKKETK 251
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 142 bits (345), Expect = 5e-33
Identities = 81/207 (39%), Positives = 115/207 (55%), Gaps = 12/207 (5%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 53 RITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFL 109
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EY + + P F LDVGL RTTTGA+VF MKGAVDGGL +
Sbjct: 110 TQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFI 167
Query: 365 PHSIKR----FPGYDAESKKFNAEV--------HRAHIFGLHVAEYMXSLEQDDEDSFKR 508
PH++ R F D ++ K +V ++ +I G VA+YM L+++ E+ + +
Sbjct: 168 PHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRKLKKESEEKYNK 227
Query: 509 QFXKYIKLGVTAXAIEAIYXKAHEAIR 589
QF +Y+K G+TA ++E IY AH AIR
Sbjct: 228 QFSRYVKAGITADSLEKIYKDAHAAIR 254
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 126 bits (303), Expect = 6e-28
Identities = 65/164 (39%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 54 RHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTL 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
+ N++ P F LD+GL R+T G RVF A+KGA DGG+++
Sbjct: 114 KMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHI 168
Query: 365 PHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYMXSLEQD 487
PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 169 PHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 105 bits (251), Expect = 1e-21
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +2
Query: 290 GLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 469
GL RTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Query: 470 XSLEQDDEDSFKRQFXKYIKLGVTAXAIEAI 562
L ++DED++K+Q +YIK +T +E I
Sbjct: 131 CFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +2
Query: 11 SNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 151
+N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 6 TNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +2
Query: 230 EYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 409
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 410 KFNAEVHRAHIFGLHVAEYMXSLE 481
+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R S ++++ Q+ S ++GD I+ ++Y L + K NY +Y G
Sbjct: 54 RFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKV 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
YN + N T +D+GL R T G + F +MKG+VD G+N+
Sbjct: 114 KQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINI 159
Query: 365 PHSIKRFPGYDAESKKFNA-EVHRAHIFGLHVAEYMXSLEQDDEDSFKRQF 514
PH+ + + ++ + ++ E+ G+H+ +Y+ L+ +DE+ K+QF
Sbjct: 160 PHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYIDLLKNEDEEKLKKQF 208
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 69.7 bits (163), Expect = 5e-11
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 401 ESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTAXAIEAIYXKAHE 580
+SK+ +AEVHR +I+G HVA YM L +D+ + ++ F YIK + IE +Y K H
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHA 63
Query: 581 AIRADXSHKKKE 616
AIR D S KK +
Sbjct: 64 AIRPDPSPKKSQ 75
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/112 (29%), Positives = 60/112 (53%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 460
LDVGL + G+RVF A+KGA+D G+ +PHS + PG ++ E H+A
Sbjct: 104 LDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG----DERVRCE---------HIA 150
Query: 461 EYMXSLEQDDEDSFKRQFXKYIKLGVTAXAIEAIYXKAHEAIRADXSHKKKE 616
++ +L++++ + ++RQF +Y+ G+ + + +AI H +E
Sbjct: 151 QWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAIEEAYKHVAEE 202
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 151
R+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 38 RISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFP 388
LD+GL R GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 39.9 bits (89), Expect = 0.051
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 151
R +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 38 RKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 460
LD+G+ + G +++ +KGA+D GL +PH+ P + I G H+A
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP-------------EDSRIRGEHIA 149
Query: 461 EYMXSLEQDDEDSFKRQFXKYIKLGVTAXAI----EAIYXKAHEA 583
+Y S++ D++++ +F YI+ G++ I E++ K EA
Sbjct: 150 QYAESMDDDEKNA---KFANYIRCGLSPEEIPDHFESVKNKIDEA 191
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFP 388
LDVGL T+G RVF A++G VD GL++PH P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFP 388
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.1 bits (92), Expect = 0.022
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHS 373
LD+GL T G++VF +GA+D GL++PH+
Sbjct: 103 LDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 151
R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 38 RKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 309
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 380 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDE------DSFKRQFXKYIKLGVT 541
RF ++ + K+ +++VH H+ HVA Y+ L +D+ +F+ F Y +G+
Sbjct: 129 RFAEFNKDGKQLDSDVHLKHVRDGHVAAYVVILMKDNSLSIEGYHTFRGGFWNYFSMGMD 188
Query: 542 AXAIEAIY 565
A A A +
Sbjct: 189 ARASYAFH 196
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 281 LDVGLXRTTTGARVFGAMKGAVDGGLNVPHSIKRFP 388
LD G + G R+ +KG D G+ VPH FP
Sbjct: 98 LDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,713,058
Number of Sequences: 1657284
Number of extensions: 10106920
Number of successful extensions: 24102
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 23323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24075
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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