Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F05
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   205   3e-53
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   204   6e-53
04_04_1146 + 31249488-31249722,31250145-31250236,31251158-312512...    28   7.2  
02_04_0381 - 22497519-22497769,22498157-22498247                       27   9.5  

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  205 bits (500), Expect = 3e-53
 Identities = 96/206 (46%), Positives = 133/206 (64%)
 Frame = +2

Query: 8   LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 187
           ++NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG            
Sbjct: 53  VTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRG 112

Query: 188 XXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNVP 367
                         +Y VEP D     F   LDVGL RTTTG RVFGA+KGA+DGGL++P
Sbjct: 113 LDQEYEGNIEATGEDYYVEPADER-RPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 171

Query: 368 HSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTAX 547
           HS KRF G+  + K+ ++++HR +I+G HVA+YM S+ +++ + F+  F +Y+K G+ A 
Sbjct: 172 HSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDAD 231

Query: 548 AIEAIYXKAHEAIRADXSHKKKELKK 625
            +EA+Y K H AIRAD +  K   K+
Sbjct: 232 GMEALYKKVHAAIRADPTMAKSTKKE 257


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  204 bits (497), Expect = 6e-53
 Identities = 95/206 (46%), Positives = 133/206 (64%)
 Frame = +2

Query: 8   LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 187
           ++NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TG            
Sbjct: 53  VTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRG 112

Query: 188 XXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNVP 367
                         +Y VEP D     F   LDVGL RTTTG RVFGA+KGA+DGGL++P
Sbjct: 113 LDQEYEGNVEATGEDYYVEPADER-RPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 171

Query: 368 HSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTAX 547
           HS KRF G+  + K+ ++++HR +I+G HVA+YM S+ +++ + F+  F +Y+K G+ A 
Sbjct: 172 HSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDAD 231

Query: 548 AIEAIYXKAHEAIRADXSHKKKELKK 625
            +E++Y K H AIRAD +  K   K+
Sbjct: 232 GMESLYKKVHAAIRADPTMAKSTKKE 257


>04_04_1146 +
           31249488-31249722,31250145-31250236,31251158-31251209,
           31251377-31251477,31251587-31252020,31252453-31252507,
           31252614-31252667,31252774-31253190
          Length = 479

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
 Frame = +2

Query: 344 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXS-LEQDDEDSFKRQFXK 520
           VDG  +VP    +  G DA ++   A  HR  +   HV   +   L   + D F      
Sbjct: 329 VDGDGSVPVESAKADGLDAVARVGVAADHRGIVCDRHVFRIIQHWLHAGEPDPFYDPLND 388

Query: 521 YIKLGVTAXAIEAIYXKAHE--AIRAD---XSHKKKELKK 625
           Y+ L  TA  IE  + K  +  ++R D    SH+  E K+
Sbjct: 389 YVIL-PTAFEIEKYHEKHGDITSVREDWEIISHRDDESKR 427


>02_04_0381 - 22497519-22497769,22498157-22498247
          Length = 113

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 103 WCEGWSDKLCCSIFNWSAISTKTASK 180
           +C+G+ DK CC   +WS    K  SK
Sbjct: 90  YCDGYDDKSCCD--DWSGDCHKCCSK 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,958,805
Number of Sequences: 37544
Number of extensions: 292040
Number of successful extensions: 586
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)