Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F05
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 263 3e-70
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 263 4e-70
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 263 4e-70
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 263 4e-70
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 263 4e-70
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 261 2e-69
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 259 7e-69
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 161 1e-39
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 146 4e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 85 2e-16
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 263 bits (645), Expect = 3e-70
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 263 bits (644), Expect = 4e-70
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 263 bits (644), Expect = 4e-70
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 263 bits (644), Expect = 4e-70
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 263 bits (644), Expect = 4e-70
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 261 bits (639), Expect = 2e-69
Identities = 120/207 (57%), Positives = 149/207 (71%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 113
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 174 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 233
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 234 DMMEEMYKKAHAAIRENPVYEKKPKKE 260
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 259 bits (634), Expect = 7e-69
Identities = 121/207 (58%), Positives = 150/207 (72%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 120
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 121 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 180
Query: 365 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVTA 544
PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L ++DED++K+QF +YIK VT
Sbjct: 181 PHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTP 240
Query: 545 XAIEAIYXKAHEAIRADXSHKKKELKK 625
+E +Y KAH AIR + ++KK K+
Sbjct: 241 D-MEEMYKKAHAAIRENPVYEKKPKKE 266
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 161 bits (392), Expect = 1e-39
Identities = 73/122 (59%), Positives = 86/122 (70%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 4 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRF 63
Query: 185 XXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLNV 364
EYNVE +D P AFTCYLD GL RTTTG +VFGA+KGAVDGGL++
Sbjct: 64 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 123
Query: 365 PH 370
PH
Sbjct: 124 PH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 146 bits (355), Expect = 4e-35
Identities = 66/108 (61%), Positives = 86/108 (79%)
Frame = +2
Query: 302 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLE 481
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 482 QDDEDSFKRQFXKYIKLGVTAXAIEAIYXKAHEAIRADXSHKKKELKK 625
++DED++K+QF +YIK VT +E +Y KAH AIR + ++KK K+
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKE 108
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/45 (77%), Positives = 43/45 (95%)
Frame = +2
Query: 5 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 139
R++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 54 RVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,395,985
Number of Sequences: 237096
Number of extensions: 1661880
Number of successful extensions: 2774
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2764
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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