Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_F05
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   219   2e-57
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  219 bits (534), Expect = 2e-57
 Identities = 108/210 (51%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
 Frame = +2

Query: 5   RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 184
           R++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG           
Sbjct: 54  RITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTI 113

Query: 185 XXXXXXXXXXXXXXXEYNVEPV-DNGPXAFTCYLDVGLXRTTTGARVFGAMKGAVDGGLN 361
                          +YNVE   D  P  F   LD+GL RTTTG+++F  MKG  DGG+N
Sbjct: 114 GLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGIN 171

Query: 362 VPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFXKYIKLGVT 541
           VPHS  RF G+D ESK++NAE HR  I G HVA+YM  L+++DED +KRQF K++  G+ 
Sbjct: 172 VPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLN 231

Query: 542 AXAIEAIYXKAHEAIRADXSHKKKELKKDS 631
           A  + A Y K H AIRAD S   K+  K S
Sbjct: 232 ADNLVATYQKVHSAIRADASPAAKKAAKPS 261


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 122 SDQPSHHNVATHVNKQRTQYGHLQSESRP 36
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 122 SDQPSHHNVATHVNKQRTQYGHLQSESRP 36
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 122 SDQPSHHNVATHVNKQRTQYGHLQSESRP 36
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = +2

Query: 338 GAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMXSLEQDDEDSFKRQFX 517
           G V G  N+   + +  GYD     FN+E+  A  +     E   + E +D  + K  + 
Sbjct: 269 GTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAAFKYNA-TTETFLTFETNDTIAAKIDYV 327

Query: 518 KYIKLG 535
           K   LG
Sbjct: 328 KDRILG 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,601,270
Number of Sequences: 27780
Number of extensions: 256499
Number of successful extensions: 617
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)