Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F04
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3D0 Cluster: CG5818-PA; n=6; Endopterygota|Rep: CG58... 191 1e-47
UniRef50_Q9BYD3 Cluster: Mitochondrial 39S ribosomal protein L4;... 165 8e-40
UniRef50_UPI0000E4A057 Cluster: PREDICTED: similar to mitochondr... 157 3e-37
UniRef50_O17005 Cluster: Putative uncharacterized protein; n=2; ... 140 2e-32
UniRef50_A7RJ96 Cluster: Predicted protein; n=1; Nematostella ve... 122 6e-27
UniRef50_P38516 Cluster: 50S ribosomal protein L4; n=6; Bacteria... 94 2e-18
UniRef50_Q8VY61 Cluster: 50S ribosomal protein L4; n=10; Magnoli... 90 5e-17
UniRef50_Q075M8 Cluster: Plastid 50S ribosomal protein L4 family... 87 3e-16
UniRef50_Q6F1Z3 Cluster: 50S ribosomal protein L4; n=6; Firmicut... 87 3e-16
UniRef50_Q8ETY1 Cluster: 50S ribosomal protein L4; n=79; Firmicu... 87 5e-16
UniRef50_Q00YX6 Cluster: 50S ribosomal protein L4; n=2; Ostreoco... 86 6e-16
UniRef50_Q6AP70 Cluster: 50S ribosomal protein L4; n=2; Desulfob... 85 1e-15
UniRef50_P61061 Cluster: 50S ribosomal protein L4; n=1; Bdellovi... 85 1e-15
UniRef50_Q2LQA0 Cluster: 50S ribosomal protein L4; n=3; Deltapro... 85 2e-15
UniRef50_Q85FW2 Cluster: Chloroplast 50S ribosomal protein L4; n... 85 2e-15
UniRef50_P61054 Cluster: 50S ribosomal protein L4; n=25; Firmicu... 83 4e-15
UniRef50_Q9TLT3 Cluster: Chloroplast 50S ribosomal protein L4; n... 83 4e-15
UniRef50_Q2JV82 Cluster: 50S ribosomal protein L4; n=20; Cyanoba... 83 7e-15
UniRef50_Q67JU4 Cluster: 50S ribosomal protein L4; n=39; Bacteri... 83 7e-15
UniRef50_Q2JFH5 Cluster: 50S ribosomal protein L4; n=49; Actinob... 82 1e-14
UniRef50_P51313 Cluster: Chloroplast 50S ribosomal protein L4; n... 82 1e-14
UniRef50_Q8DMN0 Cluster: 50S ribosomal protein L4; n=16; Cyanoba... 81 2e-14
UniRef50_Q6B8V4 Cluster: Chloroplast 50S ribosomal protein L4; n... 81 3e-14
UniRef50_Q9ZCQ6 Cluster: 50S ribosomal protein L4; n=10; Rickett... 80 5e-14
UniRef50_Q28UW1 Cluster: 50S ribosomal protein L4; n=28; Alphapr... 79 7e-14
UniRef50_Q6A6M7 Cluster: 50S ribosomal protein L4; n=1; Propioni... 79 1e-13
UniRef50_Q4PHH8 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_P49546 Cluster: Chloroplast 50S ribosomal protein L4; n... 78 2e-13
UniRef50_Q1Q137 Cluster: Strongly similar to 50S ribosomal prote... 77 5e-13
UniRef50_Q6KI54 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 76 9e-13
UniRef50_A7CUV4 Cluster: Ribosomal protein L4/L1e; n=1; Opitutac... 75 1e-12
UniRef50_Q9FA03 Cluster: 50S ribosomal protein L4; n=1; Brachysp... 75 1e-12
UniRef50_Q8RIF6 Cluster: 50S ribosomal protein L4; n=3; Fusobact... 75 1e-12
UniRef50_Q89J85 Cluster: 50S ribosomal protein L4; n=66; Alphapr... 75 2e-12
UniRef50_UPI0000057DE0 Cluster: 50S ribosomal protein L4; n=1; B... 73 5e-12
UniRef50_A3EVS0 Cluster: Ribosomal protein L4; n=1; Leptospirill... 73 5e-12
UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Trophery... 73 5e-12
UniRef50_A5KRQ2 Cluster: Ribosomal protein L4/L1e; n=1; candidat... 73 6e-12
UniRef50_A5IYY5 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 73 6e-12
UniRef50_Q30Z43 Cluster: 50S ribosomal protein L4; n=4; Desulfov... 73 6e-12
UniRef50_UPI0001509D48 Cluster: ribosomal protein L4/L1 family p... 73 8e-12
UniRef50_A6DPN5 Cluster: 50S ribosomal protein L4; n=1; Lentisph... 73 8e-12
UniRef50_A4E9J5 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A6GCH8 Cluster: 50S ribosomal protein L4; n=1; Plesiocy... 71 2e-11
UniRef50_P56032 Cluster: 50S ribosomal protein L4; n=28; Epsilon... 71 2e-11
UniRef50_P61063 Cluster: 50S ribosomal protein L4; n=9; Desulfur... 71 2e-11
UniRef50_Q5PA59 Cluster: 50S ribosomal protein L4; n=11; Alphapr... 71 2e-11
UniRef50_A5USI8 Cluster: Ribosomal protein L4/L1e; n=5; Chlorofl... 71 2e-11
UniRef50_O46895 Cluster: Chloroplast 50S ribosomal protein L4; n... 71 2e-11
UniRef50_Q5BZ19 Cluster: SJCHGC04542 protein; n=2; Schistosoma j... 71 3e-11
UniRef50_P49665 Cluster: 50S ribosomal protein L4; n=6; Bacteria... 70 4e-11
UniRef50_Q0TWI7 Cluster: Putative uncharacterized protein; n=6; ... 70 6e-11
UniRef50_Q98PY2 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 70 6e-11
UniRef50_A7BY81 Cluster: Ribosomal protein L4/L1e; n=2; Gammapro... 69 1e-10
UniRef50_Q84U22 Cluster: Ribosomal protein L4; n=1; Chlamydomona... 69 1e-10
UniRef50_Q0EW37 Cluster: 50S ribosomal protein L4; n=1; Mariprof... 69 1e-10
UniRef50_A0L5X4 Cluster: Ribosomal protein L4/L1e; n=1; Magnetoc... 69 1e-10
UniRef50_A1CBM7 Cluster: 50S ribosomal protein L4; n=6; Eurotiom... 68 2e-10
UniRef50_Q9XD35 Cluster: 50S ribosomal protein L4; n=4; Leptospi... 68 2e-10
UniRef50_O66432 Cluster: 50S ribosomal protein L4; n=2; Aquifex|... 68 2e-10
UniRef50_Q5ZYP2 Cluster: 50S ribosomal protein L4; n=6; Gammapro... 68 2e-10
UniRef50_Q601L4 Cluster: 50S ribosomal protein L4; n=5; Mycoplas... 67 3e-10
UniRef50_Q7XYP3 Cluster: Ribosomal protein rpL4; n=1; Bigelowiel... 67 4e-10
UniRef50_A4S817 Cluster: Plastid ribosomal protein L4 large ribo... 67 4e-10
UniRef50_Q4A5C2 Cluster: 50S ribosomal protein L4; n=2; Mycoplas... 67 4e-10
UniRef50_Q1ISC1 Cluster: Ribosomal protein L4/L1e; n=2; Acidobac... 66 5e-10
UniRef50_Q8EUB4 Cluster: 50S ribosomal protein L4; n=3; Mycoplas... 66 7e-10
UniRef50_Q9PQQ9 Cluster: 50S ribosomal protein L4; n=1; Ureaplas... 66 9e-10
UniRef50_Q5PIV3 Cluster: 50S ribosomal protein L4; n=72; Bacteri... 66 9e-10
UniRef50_Q4FUF5 Cluster: 50S ribosomal protein L4; n=15; Proteob... 66 9e-10
UniRef50_A6PR86 Cluster: Ribosomal protein L4/L1e; n=1; Victival... 65 1e-09
UniRef50_Q1VLV8 Cluster: 50S ribosomal protein L4; n=1; Psychrof... 64 2e-09
UniRef50_Q7RXV7 Cluster: Putative uncharacterized protein NCU014... 64 2e-09
UniRef50_UPI00015BD7F8 Cluster: UPI00015BD7F8 related cluster; n... 64 4e-09
UniRef50_Q8DE40 Cluster: 50S ribosomal protein L4; n=46; Gammapr... 63 6e-09
UniRef50_Q2GED8 Cluster: 50S ribosomal protein L4; n=1; Neoricke... 63 6e-09
UniRef50_P75579 Cluster: 50S ribosomal protein L4; n=2; Mycoplas... 62 9e-09
UniRef50_Q6ME62 Cluster: Putative 50S ribosomal protein L4; n=1;... 62 1e-08
UniRef50_Q8KAH3 Cluster: 50S ribosomal protein L4; n=10; Bactero... 62 1e-08
UniRef50_Q6UCS1 Cluster: Ribosomal protein L4; n=1; uncultured m... 62 1e-08
UniRef50_Q2IJ86 Cluster: 50S ribosomal protein L4; n=4; Cystobac... 61 3e-08
UniRef50_O83220 Cluster: 50S ribosomal protein L4; n=5; Spirocha... 60 3e-08
UniRef50_O50061 Cluster: 50S ribosomal protein L4, chloroplast p... 60 3e-08
UniRef50_Q5KM69 Cluster: Ribosomal protein L4, putative; n=2; Fi... 60 5e-08
UniRef50_Q2S3R3 Cluster: 50S ribosomal protein L4; n=1; Saliniba... 60 6e-08
UniRef50_Q3ZZM3 Cluster: 50S ribosomal protein L4; n=3; Dehaloco... 59 8e-08
UniRef50_A3CHF3 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q7VQE7 Cluster: 50S ribosomal protein L4; n=6; Gammapro... 58 1e-07
UniRef50_Q1AU30 Cluster: Ribosomal protein L4/L1e; n=1; Rubrobac... 57 3e-07
UniRef50_Q54RB5 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_Q00UM3 Cluster: Chromosome 16 contig 1, DNA sequence; n... 55 1e-06
UniRef50_Q4FLL9 Cluster: 50S ribosomal protein L4; n=2; Candidat... 55 2e-06
UniRef50_O74801 Cluster: Mitochondrial ribosomal protein subunit... 54 3e-06
UniRef50_Q5L719 Cluster: 50S ribosomal protein L4; n=8; Chlamydi... 53 5e-06
UniRef50_Q8KTP1 Cluster: Ribosomal protein L4; n=1; Candidatus T... 53 7e-06
UniRef50_Q9AIG3 Cluster: Ribosomal protein L4; n=4; Candidatus C... 52 2e-05
UniRef50_Q5P331 Cluster: 50S ribosomal protein L4; n=26; Proteob... 51 3e-05
UniRef50_Q7YN80 Cluster: Ribosomal protein L4; n=1; Eimeria tene... 50 6e-05
UniRef50_Q62GK6 Cluster: 50S ribosomal protein L4; n=71; Proteob... 48 1e-04
UniRef50_Q7UN19 Cluster: 50S ribosomal protein L4; n=3; Planctom... 48 2e-04
UniRef50_Q1NYY2 Cluster: 50S ribosomal protein L4; n=1; Candidat... 48 3e-04
UniRef50_Q82X87 Cluster: 50S ribosomal protein L4; n=24; Proteob... 47 3e-04
UniRef50_P51998 Cluster: 54S ribosomal protein YmL6, mitochondri... 45 0.002
UniRef50_Q7MTL4 Cluster: 50S ribosomal protein L4; n=29; cellula... 43 0.006
UniRef50_A3LWF5 Cluster: Predicted protein; n=3; Saccharomycetac... 42 0.010
UniRef50_Q5AFP9 Cluster: Likely mitochondrial ribosomal protein;... 42 0.017
UniRef50_Q25805 Cluster: Rpl4 protein; n=1; Plasmodium falciparu... 38 0.16
UniRef50_Q9MTE6 Cluster: Ribosomal protein L4; n=1; Toxoplasma g... 36 0.84
UniRef50_Q339M5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q190J3 Cluster: Methyl-accepting chemotaxis sensory tra... 35 2.0
UniRef50_A0CQM2 Cluster: Chromosome undetermined scaffold_24, wh... 35 2.0
UniRef50_Q4EE76 Cluster: Ribosomal protein L4/L1 family; n=1; Li... 34 2.6
UniRef50_Q6IKC3 Cluster: HDC12883; n=1; Drosophila melanogaster|... 33 4.5
UniRef50_Q4UFI5 Cluster: Cation-transporting ATPase; n=1; Theile... 33 6.0
UniRef50_Q0UK53 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI000023E898 Cluster: hypothetical protein FG02472.1; ... 33 7.9
UniRef50_Q8KFV4 Cluster: Glycosyl transferase; n=2; Chlorobiacea... 33 7.9
UniRef50_A0THM1 Cluster: Conjugal transfer protein TrbG/VirB9/Ca... 33 7.9
UniRef50_A7DNT6 Cluster: Major facilitator superfamily MFS_1; n=... 33 7.9
>UniRef50_Q9V3D0 Cluster: CG5818-PA; n=6; Endopterygota|Rep:
CG5818-PA - Drosophila melanogaster (Fruit fly)
Length = 296
Score = 191 bits (465), Expect = 1e-47
Identities = 89/149 (59%), Positives = 111/149 (74%), Gaps = 2/149 (1%)
Frame = +3
Query: 207 SAAVTTTTANKTINILKKEWE--FPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAP 380
+A V A ++ IL +++ P R+ WI N D+V E+K+GLIELHP V+AA
Sbjct: 34 AATVGAPPATRSPLILPQDYTDCLPVSRNTARQAWIENTDAVAERKVGLIELHPDVFAAQ 93
Query: 381 PRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
PR+DII NV WQ KY +VS AHTKTRAEVRGGG+KPWPQKG GRARHGS+RSP+ +GGG
Sbjct: 94 PRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGG 153
Query: 561 VAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
V HGPRS +HF+MLPF+ R+ GLT+TLS
Sbjct: 154 VVHGPRSPTTHFYMLPFYKRVLGLTSTLS 182
>UniRef50_Q9BYD3 Cluster: Mitochondrial 39S ribosomal protein L4;
n=25; Coelomata|Rep: Mitochondrial 39S ribosomal protein
L4 - Homo sapiens (Human)
Length = 311
Score = 165 bits (401), Expect = 8e-40
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Frame = +3
Query: 249 ILKKEWEFP-PLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 425
+L+K E P P + +P + W+ +L +++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 605
+ +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S+++ML
Sbjct: 106 FKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYML 165
Query: 606 PFHLRLHGLTTTLS 647
P +R GL L+
Sbjct: 166 PMKVRALGLKVALT 179
>UniRef50_UPI0000E4A057 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L4 (L4mt); n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L4 (L4mt) - Strongylocentrotus
purpuratus
Length = 560
Score = 157 bits (380), Expect = 3e-37
Identities = 68/133 (51%), Positives = 95/133 (71%)
Frame = +3
Query: 249 ILKKEWEFPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKY 428
I ++ P +P + W+ ++S+++ KLGL++LHP V+A PR+DI+H NV+WQR Y
Sbjct: 76 ITSRDLLHPDPTVEPIQAWLETINSLEDNKLGLLDLHPHVFATFPRLDILHRNVLWQRNY 135
Query: 429 XWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLP 608
+S A K+RAEVRGGGKKPW QKG GRARHGS RSP++ GGG A GPR +S++++LP
Sbjct: 136 KRISMAKAKSRAEVRGGGKKPWRQKGTGRARHGSTRSPIWIGGGKALGPRGPRSYWYVLP 195
Query: 609 FHLRLHGLTTTLS 647
+R HGL L+
Sbjct: 196 EKIRAHGLRVALT 208
>UniRef50_O17005 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 299
Score = 140 bits (340), Expect = 2e-32
Identities = 63/145 (43%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = +3
Query: 216 VTTTTANKTINILKKEWEFPPL-YTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRID 392
V++T++ ++I+ ++ W P + K + W+ NLD+++++KLGL++LHP ++ PRID
Sbjct: 22 VSSTSSGESIDTRRELWRKPENPFIKTPQAWVSNLDTIEDEKLGLVDLHPDIFRTSPRID 81
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
I+H N+ WQ Y V T+AE+ GGG+KPWPQK GRA GSIRSP F GG A+G
Sbjct: 82 ILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKPWPQKKTGRAHVGSIRSPQFIRGGFANG 141
Query: 573 PRSGKSHFFMLPFHLRLHGLTTTLS 647
R ++ F+MLP +R+ GL L+
Sbjct: 142 VRGPRTWFYMLPDAVRIQGLCVALT 166
>UniRef50_A7RJ96 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 299
Score = 122 bits (295), Expect = 6e-27
Identities = 59/115 (51%), Positives = 76/115 (66%)
Frame = +3
Query: 303 WIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGG 482
W+ + +K LG+IEL+ V+ PRIDI+H V+WQR A K R+EVRGGG
Sbjct: 87 WVTSFKD--DKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGG 144
Query: 483 KKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+KPWPQKGL +AR GSIR+P FRGGGV HGP+ +S+ + LP +R GL LS
Sbjct: 145 RKPWPQKGLNKARQGSIRAPHFRGGGVVHGPKP-RSYEYTLPKKVRRMGLRVALS 198
>UniRef50_P38516 Cluster: 50S ribosomal protein L4; n=6;
Bacteria|Rep: 50S ribosomal protein L4 - Thermotoga
maritima
Length = 235
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/89 (49%), Positives = 58/89 (65%)
Frame = +3
Query: 312 NLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKP 491
+L +V+ +K+G +E+ V+ P D++ V Q A TKTR EV GGG+KP
Sbjct: 5 DLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKP 64
Query: 492 WPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
WPQK GRARHGSIRSP++R GGV HGP+
Sbjct: 65 WPQKHTGRARHGSIRSPIWRHGGVVHGPK 93
>UniRef50_Q8VY61 Cluster: 50S ribosomal protein L4; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 300
Score = 89.8 bits (213), Expect = 5e-17
Identities = 48/107 (44%), Positives = 62/107 (57%)
Frame = +3
Query: 327 QEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKG 506
Q ++ G + L V+ P R DIIH+ V WQ TKT +EV G G+KPW QKG
Sbjct: 97 QNEEKGFMVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKG 156
Query: 507 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
GRARHG++R P FRGG V HGP+ +SH + +R GL L+
Sbjct: 157 TGRARHGTLRGPQFRGGCVMHGPKP-RSHAIKMNKQVRRLGLKIALT 202
>UniRef50_Q075M8 Cluster: Plastid 50S ribosomal protein L4 family;
n=1; Prototheca wickerhamii|Rep: Plastid 50S ribosomal
protein L4 family - Prototheca wickerhamii
Length = 228
Score = 87.0 bits (206), Expect = 3e-16
Identities = 50/105 (47%), Positives = 61/105 (58%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
+ +G L V+ R DI+H V WQ TKTR EVRGGG+KP PQKG G
Sbjct: 79 RSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTEVRGGGRKPRPQKGGG 138
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+R GSIR+P +RGGGVAHGP +SH L +R GL + LS
Sbjct: 139 VSRQGSIRAPQWRGGGVAHGP-VPRSHAIKLLKSIRRLGLRSALS 182
>UniRef50_Q6F1Z3 Cluster: 50S ribosomal protein L4; n=6;
Firmicutes|Rep: 50S ribosomal protein L4 - Mesoplasma
florum (Acholeplasma florum)
Length = 208
Score = 87.0 bits (206), Expect = 3e-16
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 321 SVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQ 500
+VQ +++ I L+ V+ P I+ VI Q+ TKTRAEVRGGGKKPW Q
Sbjct: 7 NVQGQEVKTISLNDSVWNVAPHKQAIYDTVISQQAALRQGTKKTKTRAEVRGGGKKPWRQ 66
Query: 501 KGLGRARHGSIRSPLFRGGGVAHGP 575
KG GRAR GSIR+P +RGGGV GP
Sbjct: 67 KGTGRARQGSIRAPHWRGGGVTFGP 91
>UniRef50_Q8ETY1 Cluster: 50S ribosomal protein L4; n=79;
Firmicutes|Rep: 50S ribosomal protein L4 -
Oceanobacillus iheyensis
Length = 207
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/103 (43%), Positives = 60/103 (58%)
Frame = +3
Query: 339 LGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRA 518
+G IEL+ V+ P ++H V+ QR K R+EVRGGG+KPW QKG GRA
Sbjct: 14 VGDIELNDSVFGIEPNTHVLHEAVVMQRASLRQGTHAVKNRSEVRGGGRKPWRQKGTGRA 73
Query: 519 RHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
R GS RSP + GGG GP + +S+ + LP +R L + LS
Sbjct: 74 RQGSTRSPQWVGGGTVFGP-TPRSYSYKLPKKVRRLALRSALS 115
>UniRef50_Q00YX6 Cluster: 50S ribosomal protein L4; n=2;
Ostreococcus|Rep: 50S ribosomal protein L4 -
Ostreococcus tauri
Length = 275
Score = 86.2 bits (204), Expect = 6e-16
Identities = 45/94 (47%), Positives = 55/94 (58%)
Frame = +3
Query: 366 VYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPL 545
++ P R+D+ H V WQR TKTR EV G +K PQKG GRAR G +R+P
Sbjct: 62 IFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRARVGMLRAPQ 121
Query: 546 FRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
RGGGVAHGP +SH + LP +R GL LS
Sbjct: 122 MRGGGVAHGP-VPRSHAYALPKKVRRMGLKVALS 154
>UniRef50_Q6AP70 Cluster: 50S ribosomal protein L4; n=2;
Desulfobacterales|Rep: 50S ribosomal protein L4 -
Desulfotalea psychrophila
Length = 211
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/109 (43%), Positives = 62/109 (56%)
Frame = +3
Query: 321 SVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQ 500
+ +K+ IEL+ ++ + I+H V QR A TKTR EVRGGG KPW Q
Sbjct: 12 NTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGGAKPWRQ 71
Query: 501 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
KG GRAR GS SPL+RGGGV GP+ + + F L +R ++ LS
Sbjct: 72 KGTGRARAGSRTSPLWRGGGVTFGPKP-RDYSFKLNRKVRQQAVSMALS 119
>UniRef50_P61061 Cluster: 50S ribosomal protein L4; n=1;
Bdellovibrio bacteriovorus|Rep: 50S ribosomal protein L4
- Bdellovibrio bacteriovorus
Length = 209
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/112 (41%), Positives = 68/112 (60%)
Frame = +3
Query: 312 NLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKP 491
N+ + +++K+G +EL V+ P + +++H+ V WQ TKT+ V GGGKKP
Sbjct: 5 NVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKKP 64
Query: 492 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+ QKG G AR GS RS L GGG A GP+ +S+ F+LP +R GL+ LS
Sbjct: 65 FKQKGTGGARQGSSRSILMPGGGTAFGPQP-RSYAFVLPKKVRRLGLSMALS 115
>UniRef50_Q2LQA0 Cluster: 50S ribosomal protein L4; n=3;
Deltaproteobacteria|Rep: 50S ribosomal protein L4 -
Syntrophus aciditrophicus (strain SB)
Length = 217
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/122 (36%), Positives = 70/122 (57%)
Frame = +3
Query: 282 YTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTR 461
Y++ ++ + + + + K+ IEL+ V+ A +I+ V Q A TK R
Sbjct: 5 YSRVNKMLVAEVFDINKNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGR 64
Query: 462 AEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTT 641
++V GGGKKPW QKG GRAR G+ RSP++RGGG+ GP + + + +P +R + L +
Sbjct: 65 SDVSGGGKKPWRQKGTGRARSGTSRSPIWRGGGIVFGP-VPRDYKYNVPKKVRKNALRSV 123
Query: 642 LS 647
LS
Sbjct: 124 LS 125
>UniRef50_Q85FW2 Cluster: Chloroplast 50S ribosomal protein L4; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 50S ribosomal
protein L4 - Cyanidioschyzon merolae (Red alga)
Length = 200
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
AHTKTRAE+RGGG+KPW QKG GRAR GS RSPL+RGGGVA GPR
Sbjct: 40 AHTKTRAEIRGGGRKPWKQKGTGRARAGSRRSPLWRGGGVAFGPR 84
>UniRef50_P61054 Cluster: 50S ribosomal protein L4; n=25;
Firmicutes|Rep: 50S ribosomal protein L4 - Listeria
innocua
Length = 207
Score = 83.4 bits (197), Expect = 4e-15
Identities = 44/102 (43%), Positives = 60/102 (58%)
Frame = +3
Query: 342 GLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRAR 521
G I L+ V+ P ++ ++ QR K R+EVRGGG+KPW QKG GRAR
Sbjct: 15 GEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 522 HGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
GSIRSP +RGGGV GP + +S+ + LP +R + + LS
Sbjct: 75 QGSIRSPQWRGGGVVFGP-TPRSYAYKLPKKVRRLAIKSILS 115
>UniRef50_Q9TLT3 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Cyanidium caldarium|Rep: Chloroplast 50S ribosomal
protein L4 - Cyanidium caldarium
Length = 219
Score = 83.4 bits (197), Expect = 4e-15
Identities = 44/85 (51%), Positives = 53/85 (62%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H Q K A TKT+++VRGGGKKPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 40 VVHRVFSIQNKLSREHTASTKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFG 99
Query: 573 PRSGKSHFFMLPFHLRLHGLTTTLS 647
P+ F + +RL L T LS
Sbjct: 100 PKPKNVFFKINKKEIRL-ALYTVLS 123
>UniRef50_Q2JV82 Cluster: 50S ribosomal protein L4; n=20;
Cyanobacteria|Rep: 50S ribosomal protein L4 -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 326
Score = 82.6 bits (195), Expect = 7e-15
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFM 602
AHTKTRAEVRGGG+KPW QKG GRAR GSIRSPL+R GGV GPR + + M
Sbjct: 49 AHTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLWRKGGVIFGPRKREYNLAM 101
>UniRef50_Q67JU4 Cluster: 50S ribosomal protein L4; n=39;
Bacteria|Rep: 50S ribosomal protein L4 - Symbiobacterium
thermophilum
Length = 207
Score = 82.6 bits (195), Expect = 7e-15
Identities = 46/103 (44%), Positives = 57/103 (55%)
Frame = +3
Query: 339 LGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRA 518
+G I L V+ A ++H V A TKTRAEV GGG+KPW QKG GRA
Sbjct: 14 VGEITLSDAVFGAEVNPGLLHEVVQMYLANKRQGTADTKTRAEVSGGGRKPWRQKGTGRA 73
Query: 519 RHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
RHGSIRSPL+R GG+ GP + + + +P R L LS
Sbjct: 74 RHGSIRSPLWRKGGIVFGPHP-REYGWSMPKKARRAALRQALS 115
>UniRef50_Q2JFH5 Cluster: 50S ribosomal protein L4; n=49;
Actinobacteria (class)|Rep: 50S ribosomal protein L4 -
Frankia sp. (strain CcI3)
Length = 245
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = +3
Query: 342 GLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRAR 521
G +EL V+ P I +IH V+ Q TKTR EVRGGG+KP+ QKG GRAR
Sbjct: 27 GSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRAR 86
Query: 522 HGSIRSPLFRGGGVAHGP 575
GS+R+P F GGG HGP
Sbjct: 87 QGSLRAPQFTGGGTVHGP 104
>UniRef50_P51313 Cluster: Chloroplast 50S ribosomal protein L4; n=3;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L4 -
Porphyra purpurea
Length = 214
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H ++ Q A+TKTR+EVRGGG+KPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 36 LVHRALVKQSNEKRQGSANTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 95
Query: 573 PR 578
P+
Sbjct: 96 PK 97
>UniRef50_Q8DMN0 Cluster: 50S ribosomal protein L4; n=16;
Cyanobacteria|Rep: 50S ribosomal protein L4 -
Synechococcus elongatus (Thermosynechococcus elongatus)
Length = 210
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
I+H ++ Q TKTRAEVRGGG+KPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 32 IVHRALVRQLANARQGTVSTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 91
Query: 573 PR 578
P+
Sbjct: 92 PK 93
>UniRef50_Q6B8V4 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Gracilaria tenuistipitata var. liui|Rep: Chloroplast 50S
ribosomal protein L4 - Gracilaria tenuistipitata var.
liui (Red alga)
Length = 217
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/68 (58%), Positives = 46/68 (67%)
Frame = +3
Query: 384 RIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
+I I+H +I Q AHT+TR EV GGG+KPW QKG GRAR GS RSPL+RGGGV
Sbjct: 36 KIYILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGV 95
Query: 564 AHGPRSGK 587
GPR K
Sbjct: 96 IFGPRHKK 103
>UniRef50_Q9ZCQ6 Cluster: 50S ribosomal protein L4; n=10;
Rickettsieae|Rep: 50S ribosomal protein L4 - Rickettsia
prowazekii
Length = 207
Score = 79.8 bits (188), Expect = 5e-14
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Frame = +3
Query: 321 SVQEKKLGLIELHPMVYAAP-PRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWP 497
S+ +++G I L+ ++A R DII + WQR TKT +EV G KKP+
Sbjct: 7 SLANEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMFGNHKTKTVSEVSGTTKKPFK 66
Query: 498 QKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
QKG G AR GS+RS RGGG++HGP+ +SH LP +R GL LS
Sbjct: 67 QKGTGNARQGSLRSVQMRGGGISHGPKV-RSHAIKLPKKVRKLGLIHALS 115
>UniRef50_Q28UW1 Cluster: 50S ribosomal protein L4; n=28;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Jannaschia sp. (strain CCS1)
Length = 206
Score = 79.4 bits (187), Expect = 7e-14
Identities = 45/105 (42%), Positives = 56/105 (53%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
KK G ++L ++ PR DI+H V WQR KTR EV KK + QKG G
Sbjct: 11 KKAGSVDLDEALFGLEPRADILHRVVRWQRNNAQAGTHKVKTRREVSYSTKKIYRQKGTG 70
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
ARHG+ +P+FRGGGV GP + +SH L R GL LS
Sbjct: 71 GARHGARSAPIFRGGGVYKGP-TPRSHGHELTKKFRKLGLRHALS 114
>UniRef50_Q6A6M7 Cluster: 50S ribosomal protein L4; n=1;
Propionibacterium acnes|Rep: 50S ribosomal protein L4 -
Propionibacterium acnes
Length = 301
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +3
Query: 324 VQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQK 503
V+ KK G EL ++ I +IH V+ Q TKTR +V GGGKKPW QK
Sbjct: 12 VKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQVSGGGKKPWRQK 71
Query: 504 GLGRARHGSIRSPLFRGGGVAHGPR 578
G GRAR GS R+P + GGG HGP+
Sbjct: 72 GTGRARQGSTRAPQWVGGGTVHGPQ 96
>UniRef50_Q4PHH8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 438
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
+ L V+ AP R D+IHS V++ A TK R++VRG +K PQKG G+AR G
Sbjct: 147 VPLSAHVFDAPARRDVIHSAVVYYLDAQRSGTASTKGRSDVRGSMRKLRPQKGSGQARLG 206
Query: 528 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
++ +P+ RGG VAHGPR + H LP +R L + LS
Sbjct: 207 TMSNPILRGGAVAHGPRP-RDHSTKLPRRVRELALRSALS 245
>UniRef50_P49546 Cluster: Chloroplast 50S ribosomal protein L4; n=3;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L4 - Odontella sinensis (Marine centric diatom)
Length = 215
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
+IH +++ + TKTR+EVRGGG+KPW QKG GRAR GS RSPL++GGGV G
Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96
Query: 573 PRSGK 587
P+ K
Sbjct: 97 PKPRK 101
>UniRef50_Q1Q137 Cluster: Strongly similar to 50S ribosomal protein
L4; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L4 -
Candidatus Kuenenia stuttgartiensis
Length = 203
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/105 (39%), Positives = 59/105 (56%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
KK+ +++ + +P R ++ V TKTRAEV GGGKKPW QK G
Sbjct: 11 KKIENMQVPDSISDSPVRYKLLRDVVKMYEANKRQGTVSTKTRAEVSGGGKKPWAQKHTG 70
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+AR GS RSP++RGGGVA GP+ + + + +P + L + LS
Sbjct: 71 KARAGSSRSPIWRGGGVAFGPKP-RDYSYSIPKMAKKQALFSALS 114
>UniRef50_Q6KI54 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L4 - Mycoplasma mobile
Length = 293
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3
Query: 396 IHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
I +++++R TKTR+EV GGGKKPW QKG GRAR GS RSP++ GGG+ GP
Sbjct: 119 IFDSILFERASQRQGTHSTKTRSEVSGGGKKPWKQKGTGRARAGSTRSPIWVGGGITFGP 178
Query: 576 RSGKSHFFML 605
+ K + F +
Sbjct: 179 KPQKKYDFKI 188
>UniRef50_A7CUV4 Cluster: Ribosomal protein L4/L1e; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L4/L1e -
Opitutaceae bacterium TAV2
Length = 214
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
TKTR EVRGGGKKPW QKG GRAR GS RSPL+ GGGV GPR
Sbjct: 54 TKTRGEVRGGGKKPWRQKGTGRARAGSTRSPLWVGGGVVFGPR 96
>UniRef50_Q9FA03 Cluster: 50S ribosomal protein L4; n=1; Brachyspira
pilosicoli|Rep: 50S ribosomal protein L4 - Brachyspira
pilosicoli
Length = 215
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 629
TKTRAEV GGGKKPW QKG GRAR GS RSP++ GGG H P+ + + + LP ++
Sbjct: 50 TKTRAEVSGGGKKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKP-RDYSYRLPKKMKRKA 108
Query: 630 LTTTLS 647
L + LS
Sbjct: 109 LLSVLS 114
>UniRef50_Q8RIF6 Cluster: 50S ribosomal protein L4; n=3;
Fusobacterium nucleatum|Rep: 50S ribosomal protein L4 -
Fusobacterium nucleatum subsp. nucleatum
Length = 209
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = +3
Query: 306 IXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGK 485
+ N+ ++ ++ G +E++ V+ P ++H + + A TKTRA VRGGG+
Sbjct: 3 VLNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGR 62
Query: 486 KPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
KP+ QKG GRAR G+IR+P GGGV GP
Sbjct: 63 KPFKQKGTGRARQGTIRAPHMVGGGVTFGP 92
>UniRef50_Q89J85 Cluster: 50S ribosomal protein L4; n=66;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Bradyrhizobium japonicum
Length = 206
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/109 (41%), Positives = 57/109 (52%)
Frame = +3
Query: 321 SVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQ 500
+++ K+ G ++L ++ PR DII V WQ K RAE+ GKK + Q
Sbjct: 7 TLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTGKKMYKQ 66
Query: 501 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
KG G ARHGS R P FRGGG A GP +SH LP +R L LS
Sbjct: 67 KGTGGARHGSARVPQFRGGGRAFGP-VVRSHATDLPKKVRALALKHALS 114
>UniRef50_UPI0000057DE0 Cluster: 50S ribosomal protein L4; n=1;
Brucella melitensis 16M|Rep: 50S ribosomal protein L4 -
Brucella melitensis 16M
Length = 201
Score = 73.3 bits (172), Expect = 5e-12
Identities = 42/111 (37%), Positives = 59/111 (53%)
Frame = +3
Query: 315 LDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPW 494
+ +++ K G ++L+ ++ PR DI+ V WQ + R +V G K +
Sbjct: 5 ITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSKMY 64
Query: 495 PQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
QKG GRARH S R+P FRGGG AHGP ++H LP +R GL LS
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGQAHGP-VVRNHDHDLPKKVRALGLRHALS 114
>UniRef50_A3EVS0 Cluster: Ribosomal protein L4; n=1; Leptospirillum
sp. Group II UBA|Rep: Ribosomal protein L4 -
Leptospirillum sp. Group II UBA
Length = 218
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +3
Query: 387 IDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVA 566
I ++H + QR A TKTR EV GGGKKP+ QKG GRAR GS R+P +RGG +
Sbjct: 30 IPLLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQWRGGAII 89
Query: 567 HGPRSGKSHFFMLP 608
GPR + +F+ P
Sbjct: 90 FGPRP-RDYFYRQP 102
>UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Tropheryma
whipplei|Rep: 50S ribosomal protein L4 - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 248
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +3
Query: 339 LGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRA 518
+G ++L ++ + P + +IH V+ Q+ TK+RAEV G G+KP+ QKG G A
Sbjct: 15 VGTLQLVGHLFDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGTGNA 74
Query: 519 RHGSIRSPLFRGGGVAHGP 575
R GS R+P RGGGV HGP
Sbjct: 75 RCGSTRAPQMRGGGVVHGP 93
>UniRef50_A5KRQ2 Cluster: Ribosomal protein L4/L1e; n=1; candidate
division TM7 genomosp. GTL1|Rep: Ribosomal protein
L4/L1e - candidate division TM7 genomosp. GTL1
Length = 199
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +3
Query: 438 SWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSH 593
S A TK R EVRGGG+KP QKG GRAR GSIRSPL+RGGGV GP +++
Sbjct: 35 SAASTKKRGEVRGGGRKPHKQKGTGRARAGSIRSPLWRGGGVTFGPSGNENY 86
>UniRef50_A5IYY5 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
agalactiae|Rep: 50S ribosomal protein L4 - Mycoplasma
agalactiae
Length = 300
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 219 TTTTANKTINILKKEWEFPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRID-I 395
+T+T K K E KP V + + + +L+P ++A+
Sbjct: 67 STSTTTKKATSAKAASEAKETVKKPA-VSAEKFEKSAKLEFDTSKLNPKLFASDKIYSQA 125
Query: 396 IHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
I +I R K+RAEVRGGGKKPW QKG GRAR GS RSP++ GGG A GP
Sbjct: 126 IFDTIISDRASRRQGTHDVKSRAEVRGGGKKPWRQKGTGRARAGSTRSPIWVGGGRAFGP 185
Query: 576 RSGKSHFFMLPFHLRLHGLTTTLS 647
+++ + +R + + L+
Sbjct: 186 TPVRNYKLKVNKKVRFNAFVSVLT 209
>UniRef50_Q30Z43 Cluster: 50S ribosomal protein L4; n=4;
Desulfovibrionaceae|Rep: 50S ribosomal protein L4 -
Desulfovibrio desulfuricans (strain G20)
Length = 206
Score = 72.9 bits (171), Expect = 6e-12
Identities = 42/106 (39%), Positives = 58/106 (54%)
Frame = +3
Query: 330 EKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGL 509
+K+ G + L P V+ R +I++ V QR KTR+ + GGG KPW QKG
Sbjct: 11 KKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGGGAKPWRQKGT 70
Query: 510 GRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
GRAR GS RSP++RGG V GP+ + + F + +R L LS
Sbjct: 71 GRARSGSNRSPVWRGGAVVFGPQP-RDYSFKVNKKVRKLALKMALS 115
>UniRef50_UPI0001509D48 Cluster: ribosomal protein L4/L1 family
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein L4/L1 family protein - Tetrahymena
thermophila SB210
Length = 358
Score = 72.5 bits (170), Expect = 8e-12
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Frame = +3
Query: 237 KTINILKKEW--EFPPLYTKPREVWIXNL--DSVQEKKLGLIELHPMVYAAPPRIDIIHS 404
K IL K+W + P T+P V + ++ Q ++L ++ P R DI+HS
Sbjct: 50 KPDEILVKQWWSQSPFEKTQPLRVPVLKFLAENGQAYTGKTVDLDHDIFNVPLRRDIVHS 109
Query: 405 NVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 584
V+W++ + TKT+ V G GKKP+ QKG G+AR G+ R+P + GG AHG +
Sbjct: 110 YVLWRQNRDEIKTHITKTKGTVSGSGKKPYAQKGTGKARMGNKRAPGRKKGGKAHGAKP- 168
Query: 585 KSHFFMLPFHLRLHGLTTTLS 647
+ + L +RL L LS
Sbjct: 169 RILRYPLNKKIRLQALKVVLS 189
>UniRef50_A6DPN5 Cluster: 50S ribosomal protein L4; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L4 - Lentisphaera araneosa HTCC2155
Length = 215
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
A+TKTR+E RGGG+KPW QKG G AR GS RSP++ GGGVA GP+
Sbjct: 49 ANTKTRSEKRGGGRKPWRQKGTGNARAGSTRSPIWTGGGVAFGPK 93
>UniRef50_A4E9J5 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 208
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
KK+ EL VY P I ++H V Q K R+EV GGGKKPW QKG G
Sbjct: 12 KKVAEAELAAEVYGIEPNIHVMHHIVKCQMASWRQGTQSAKGRSEVSGGGKKPWRQKGTG 71
Query: 513 RARHGSIRSPLFRGGGVAHGPR 578
RAR GSIR+ +R GGV P+
Sbjct: 72 RARQGSIRAAQWRHGGVVFAPK 93
>UniRef50_A6GCH8 Cluster: 50S ribosomal protein L4; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L4 - Plesiocystis pacifica SIR-1
Length = 218
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/112 (37%), Positives = 58/112 (51%)
Frame = +3
Query: 312 NLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKP 491
N+ ++ + IE+ V+AA + ++ V WQR A TK R+EV G K
Sbjct: 5 NVKDLEGNDVAEIEVSDEVFAAEVKEHLLWEVVRWQRAKKRAGTAKTKERSEVHGTRSKM 64
Query: 492 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+ QKG G ARHGS R +FRGGG HGPR + + F + R L + LS
Sbjct: 65 YRQKGTGNARHGSRRVNVFRGGGQVHGPRP-RDYTFSVNKKARAGALRSALS 115
>UniRef50_P56032 Cluster: 50S ribosomal protein L4; n=28;
Epsilonproteobacteria|Rep: 50S ribosomal protein L4 -
Helicobacter pylori (Campylobacter pylori)
Length = 215
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSH 593
A +K RAEV GGG+KPW QKG GRAR GSI SP+F GGGV+HG + +++
Sbjct: 47 AKSKNRAEVSGGGRKPWAQKGGGRARAGSITSPVFVGGGVSHGATNNRNY 96
>UniRef50_P61063 Cluster: 50S ribosomal protein L4; n=9;
Desulfuromonadales|Rep: 50S ribosomal protein L4 -
Geobacter sulfurreducens
Length = 207
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +3
Query: 324 VQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQK 503
+ + K+G+++L+ V+ + +IH + Q K RA V GGGKKP+ QK
Sbjct: 9 ISKNKVGVMDLNDNVFNGEVKEYLIHEAIKVQLANRRAGTVSVKNRAIVSGGGKKPYRQK 68
Query: 504 GLGRARHGSIRSPLFRGGGVAHGPR 578
G G+AR G IR+P F GGGVA GPR
Sbjct: 69 GTGQARQGCIRAPHFVGGGVAFGPR 93
>UniRef50_Q5PA59 Cluster: 50S ribosomal protein L4; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Anaplasma marginale (strain St. Maries)
Length = 208
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/112 (35%), Positives = 59/112 (52%)
Frame = +3
Query: 312 NLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKP 491
N+ +++ + +G ++L V+ R D++ V WQ T+ ++V G KP
Sbjct: 4 NVVNIKNEVVGKVQLSAEVFGVQLRRDVLRDVVTWQLAKRRAGTHKTRCISDVSGTTAKP 63
Query: 492 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+ QK GRAR GS+RSP FRGG V GP +SH + L +R GL LS
Sbjct: 64 YRQKHTGRARQGSLRSPQFRGGAVVFGP-VNRSHAYSLNKKVRRLGLKVALS 114
>UniRef50_A5USI8 Cluster: Ribosomal protein L4/L1e; n=5; Chloroflexi
(class)|Rep: Ribosomal protein L4/L1e - Roseiflexus sp.
RS-1
Length = 223
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
+++G+I++ V+ P + ++H + QR + +T R EV G +K + QKG G
Sbjct: 11 EEVGVIQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKGTG 70
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
RAR GSIR+P +GGG+AHGP K + +P +R + + LS
Sbjct: 71 RARQGSIRAPHRKGGGIAHGPHPRK-YTKAMPRKMRRLAVRSALS 114
>UniRef50_O46895 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Guillardia theta|Rep: Chloroplast 50S ribosomal protein
L4 - Guillardia theta (Cryptomonas phi)
Length = 223
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
A TKTR+EV GGGKKPW QKG G AR GS SPL++GGGV GP+
Sbjct: 59 ACTKTRSEVEGGGKKPWKQKGTGNARAGSSNSPLWKGGGVTFGPK 103
>UniRef50_Q5BZ19 Cluster: SJCHGC04542 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC04542 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Frame = +3
Query: 273 PPLYTKP----REVWIXNL-------DSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQ 419
PP+Y P R W+ L S + +G+++LHP ++A PRID++H N+ WQ
Sbjct: 63 PPVYCSPTRNSRLAWLETLKPLGLSQSSNTQSLVGMVDLHPDIFAVFPRIDLVHKNLYWQ 122
Query: 420 RKYXWVSWAHTKTRAEV-RGGGKKPWPQKGL 509
Y + W TRAE+ G KKPWPQK L
Sbjct: 123 AHYRLIDWRCITTRAELPYGTRKKPWPQKKL 153
>UniRef50_P49665 Cluster: 50S ribosomal protein L4; n=6;
Bacteria|Rep: 50S ribosomal protein L4 - Thermus
thermophilus
Length = 210
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/80 (45%), Positives = 46/80 (57%)
Frame = +3
Query: 408 VIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGK 587
V WQ A TKTR EV G+K WPQK GRARHG I +P+F GGGV GP+ +
Sbjct: 37 VRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKP-R 95
Query: 588 SHFFMLPFHLRLHGLTTTLS 647
+ + LP +R GL ++
Sbjct: 96 DYSYTLPKKVRKKGLAMAVA 115
>UniRef50_Q0TWI7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 562
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = +3
Query: 378 PPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGG 557
P R DI+H V+++ + A TKTR EV G +K PQKG GRAR G +SP+ RGG
Sbjct: 100 PTRRDILHRAVVYEGDSTRLGTASTKTRYEVHGSRRKIRPQKGSGRARLGDRKSPMLRGG 159
Query: 558 GVAHGPR 578
GVA GP+
Sbjct: 160 GVAFGPK 166
>UniRef50_Q98PY2 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
pulmonis|Rep: 50S ribosomal protein L4 - Mycoplasma
pulmonis
Length = 292
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 632
K RAEV G GKKPW QKG G+AR GS+R+P+F GGG A GP +++ + +RL+ L
Sbjct: 137 KNRAEVSGTGKKPWKQKGTGKARAGSLRNPIFVGGGRAFGPSVNRNYKISINKKVRLNAL 196
Query: 633 TTTL 644
+L
Sbjct: 197 MASL 200
>UniRef50_A7BY81 Cluster: Ribosomal protein L4/L1e; n=2;
Gammaproteobacteria|Rep: Ribosomal protein L4/L1e -
Beggiatoa sp. PS
Length = 218
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/89 (41%), Positives = 48/89 (53%)
Frame = +3
Query: 297 EVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRG 476
E+ + NL +I + V+ AP +IH V + S K RA+VRG
Sbjct: 2 ELTLTNLPDETSGLGSVISVSDRVFTAPFNEPLIHQAVTAYLLGSYQSQKSVKNRAQVRG 61
Query: 477 GGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
KPW QKG GRAR GS++SPL+RGGGV
Sbjct: 62 STAKPWRQKGTGRARAGSVKSPLWRGGGV 90
>UniRef50_Q84U22 Cluster: Ribosomal protein L4; n=1; Chlamydomonas
reinhardtii|Rep: Ribosomal protein L4 - Chlamydomonas
reinhardtii
Length = 243
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H ++ ++ A T TR+EVRGGGKKP+ QKG G AR GS SPLF GGGV G
Sbjct: 58 LVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGGGVTFG 117
Query: 573 PR 578
P+
Sbjct: 118 PK 119
>UniRef50_Q0EW37 Cluster: 50S ribosomal protein L4; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L4 - Mariprofundus ferrooxydans PV-1
Length = 207
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
K++G EL+P V+ +H + K R+EV GGGKKPW QKG G
Sbjct: 12 KEVGKRELNPAVFGLDADAAFVHRVYAALASAQRGGTSKVKDRSEVSGGGKKPWKQKGTG 71
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKS 590
RAR GS R +R GG AHGP + S
Sbjct: 72 RARAGSSRQAQWRHGGTAHGPSADTS 97
>UniRef50_A0L5X4 Cluster: Ribosomal protein L4/L1e; n=1;
Magnetococcus sp. MC-1|Rep: Ribosomal protein L4/L1e -
Magnetococcus sp. (strain MC-1)
Length = 207
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/99 (39%), Positives = 55/99 (55%)
Frame = +3
Query: 351 ELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGS 530
EL+ V+ R D++ V +Q + A R++VRGGGKKP+ QKG G AR G+
Sbjct: 18 ELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGGKKPYRQKGTGNARQGT 77
Query: 531 IRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
IR+P FR GG+ GP+ + + L +R L T LS
Sbjct: 78 IRAPQFRTGGIVFGPQQ-RDYSHKLNKKVRKLALQTALS 115
>UniRef50_A1CBM7 Cluster: 50S ribosomal protein L4; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L4 -
Aspergillus clavatus
Length = 292
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/118 (38%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +3
Query: 225 TTANKTINILKKEWEFPPLYT-KPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRIDIIH 401
T A T L +E P T +P V + L +IE P R DI+H
Sbjct: 42 TEAQSTTEYLTREAPTVPKPTWEPAPVKATAYSFPSMEPLRVIEYPRNHLLMPLRKDILH 101
Query: 402 SNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
V+++ A TK RA+V G KK + QKG GRAR G +SP+ RGGGVA GP
Sbjct: 102 RAVVYEGDMTRQGTASTKWRADVHGSNKKLYAQKGTGRARAGDKKSPIRRGGGVAFGP 159
>UniRef50_Q9XD35 Cluster: 50S ribosomal protein L4; n=4;
Leptospira|Rep: 50S ribosomal protein L4 - Leptospira
interrogans
Length = 211
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
TKTR+ V GGGKKPW QKG GRAR GS R+P + GGG HGP+
Sbjct: 50 TKTRSMVSGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVHGPQ 92
>UniRef50_O66432 Cluster: 50S ribosomal protein L4; n=2;
Aquifex|Rep: 50S ribosomal protein L4 - Aquifex aeolicus
Length = 199
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/104 (38%), Positives = 54/104 (51%)
Frame = +3
Query: 336 KLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGR 515
K+G +E+ V+ + ++ V WQ TKTR EV G+K PQKG G
Sbjct: 2 KIGDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGN 61
Query: 516 ARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
ARHG +F GGGVAHGP+ + + + LP +R GL LS
Sbjct: 62 ARHGERGVNIFVGGGVAHGPKP-RDYEYPLPKRVRKLGLKMALS 104
>UniRef50_Q5ZYP2 Cluster: 50S ribosomal protein L4; n=6;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 202
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
++L+ ++A ++H V+ + KTR+EV GGGKKPW QKG GRAR G
Sbjct: 13 LKLNKEIFAYTYNEGLVHQAVVTFMNNARSGNSAQKTRSEVSGGGKKPWNQKGTGRARAG 72
Query: 528 SIRSPLFRGGGV 563
+IRSPL+R GGV
Sbjct: 73 TIRSPLWRSGGV 84
>UniRef50_Q601L4 Cluster: 50S ribosomal protein L4; n=5;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
hyopneumoniae (strain 232)
Length = 214
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +3
Query: 381 PRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
P I +++ +R +S K RAEV G GKKPW QK G+AR GS RSP+F GGG
Sbjct: 36 PHFQAIFDSILSERASKRLSTHKVKNRAEVSGTGKKPWKQKSTGKARAGSKRSPIFVGGG 95
Query: 561 VAHGPRSGKSH 593
A GP + +++
Sbjct: 96 RAFGPTTQRNY 106
>UniRef50_Q7XYP3 Cluster: Ribosomal protein rpL4; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL4 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 335
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H +++ R A TKT++EVRGGGKKP+ QK G AR GS R+PL GGG+ G
Sbjct: 142 LVHRYLMYARNSMRAGTASTKTKSEVRGGGKKPYQQKKTGNARQGSRRTPLKPGGGIIFG 201
Query: 573 PR 578
P+
Sbjct: 202 PK 203
>UniRef50_A4S817 Cluster: Plastid ribosomal protein L4 large
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein L4 large
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 251
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H V+ R+ A T T++EVRGGG+KP+ QKG G AR GS R+PL GGGV+ G
Sbjct: 67 LVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGNARAGSSRTPLKPGGGVSFG 126
Query: 573 PR 578
P+
Sbjct: 127 PK 128
>UniRef50_Q4A5C2 Cluster: 50S ribosomal protein L4; n=2; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L4 - Mycoplasma
synoviae (strain 53)
Length = 229
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSH 593
K RA V G GKKPW QKG GRARH S RSP++ GGG A GP+S K++
Sbjct: 71 KNRAAVSGSGKKPWKQKGTGRARHSSRRSPIWVGGGRAFGPQSVKNY 117
>UniRef50_Q1ISC1 Cluster: Ribosomal protein L4/L1e; n=2;
Acidobacteria|Rep: Ribosomal protein L4/L1e -
Acidobacteria bacterium (strain Ellin345)
Length = 217
Score = 66.5 bits (155), Expect = 5e-10
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAH-----TKTRAEVRGGGKKPWP 497
+K+G EL V+ A ++ +++W+ + + H TK + V G GKK W
Sbjct: 12 EKVGSFELADEVFGA------VNEDLLWEAVKHYRAGQHRGTHATKNKKLVSGAGKKLWK 65
Query: 498 QKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
QKG GRAR GSIRSPL+R GG HGP+ +S+ + P L L + L+
Sbjct: 66 QKGTGRARVGSIRSPLWRHGGTVHGPQP-RSYDYAFPRKKLLGALRSALA 114
>UniRef50_Q8EUB4 Cluster: 50S ribosomal protein L4; n=3;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
penetrans
Length = 213
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 396 IHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
I ++V+ + S A T T+AEVRGGG+KP+ QK GRAR GSIR+P + GGG A GP
Sbjct: 36 IFNSVLVEEANSRQSTASTLTKAEVRGGGRKPYKQKHTGRARQGSIRNPHYVGGGRAFGP 95
Query: 576 RSGKSH 593
K++
Sbjct: 96 SPEKNY 101
>UniRef50_Q9PQQ9 Cluster: 50S ribosomal protein L4; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L4 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 211
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 629
T T+ EVRGGGKKPW QK G+AR GS R+P + GGGV GP+ +++ + +RL
Sbjct: 51 TLTKGEVRGGGKKPWRQKHTGKARTGSTRNPHWTGGGVVFGPKPNRNYNLKVNAKVRLLA 110
Query: 630 LTTTLS 647
+ L+
Sbjct: 111 FKSALT 116
>UniRef50_Q5PIV3 Cluster: 50S ribosomal protein L4; n=72;
Bacteria|Rep: 50S ribosomal protein L4 - Salmonella
paratyphi-a
Length = 201
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
KTRAEV G GKKPW QKG GRAR GSI+SP++R GGV R
Sbjct: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR 88
>UniRef50_Q4FUF5 Cluster: 50S ribosomal protein L4; n=15;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Psychrobacter arcticum
Length = 200
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVA 566
KTRAEV GGG KPW QKG GRAR GSIRSP++RGGG A
Sbjct: 46 KTRAEVSGGGIKPWRQKGTGRARAGSIRSPIWRGGGRA 83
>UniRef50_A6PR86 Cluster: Ribosomal protein L4/L1e; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein L4/L1e -
Victivallis vadensis ATCC BAA-548
Length = 209
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +3
Query: 396 IHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
+H V+ A TKTR EV GGG KP+ QKG+GRAR GS RSP++ GGG GP
Sbjct: 34 VHDTVVAYLAGQRAGTACTKTRGEVSGGGAKPFRQKGMGRARAGSSRSPVWVGGGTIFGP 93
Query: 576 R 578
R
Sbjct: 94 R 94
>UniRef50_Q1VLV8 Cluster: 50S ribosomal protein L4; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L4 - Psychroflexus torquis ATCC 700755
Length = 207
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
++ R+ VRGGGKKPW QKG G AR G+IRSPL++GGG GP
Sbjct: 50 SRNRSAVRGGGKKPWKQKGRGVARAGTIRSPLWKGGGAVFGP 91
>UniRef50_Q7RXV7 Cluster: Putative uncharacterized protein
NCU01474.1; n=4; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01474.1 - Neurospora crassa
Length = 349
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = +3
Query: 378 PPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGG 557
P R DI+H VI++ A TKTR EV G KK PQKG G AR G+ +SPL +GG
Sbjct: 115 PLRRDILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQKGTGNARRGTRQSPLMKGG 174
Query: 558 GVAHGPR 578
G GP+
Sbjct: 175 GKTFGPK 181
>UniRef50_UPI00015BD7F8 Cluster: UPI00015BD7F8 related cluster; n=1;
unknown|Rep: UPI00015BD7F8 UniRef100 entry - unknown
Length = 200
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/76 (44%), Positives = 41/76 (53%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
+EL V+ P+ I+ V WQ TKTRAEV KK PQKG G ARHG
Sbjct: 6 VELRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNARHG 65
Query: 528 SIRSPLFRGGGVAHGP 575
+ + +F GGGV HGP
Sbjct: 66 ARSANIFVGGGVVHGP 81
>UniRef50_Q8DE40 Cluster: 50S ribosomal protein L4; n=46;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Vibrio vulnificus
Length = 200
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
KTR+EV GGG KPW QKG GRAR G+IRSPL+R GGV
Sbjct: 46 KTRSEVSGGGAKPWRQKGTGRARAGTIRSPLWRTGGV 82
>UniRef50_Q2GED8 Cluster: 50S ribosomal protein L4; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L4 - Neorickettsia sennetsu (strain Miyayama)
Length = 214
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/111 (35%), Positives = 55/111 (49%)
Frame = +3
Query: 315 LDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPW 494
LD G + + + AP R D++ + WQ TK +EV G +KP+
Sbjct: 9 LDFGASSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPY 68
Query: 495 PQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
QKG GRAR GS+R+P FR GG+ GP + H F + +R L + LS
Sbjct: 69 RQKGTGRARQGSLRAPQFRKGGIVFGP-VVRQHGFSVNKKVRSLALRSALS 118
>UniRef50_P75579 Cluster: 50S ribosomal protein L4; n=2;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
pneumoniae
Length = 212
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 432 WVSWAHT-KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 605
W H+ T+ EVRGGGKKP+ QK G+AR GS R+P F GGG+ GP+ +++ L
Sbjct: 45 WRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGSTRNPHFVGGGIVFGPKPNRNYSLKL 103
>UniRef50_Q6ME62 Cluster: Putative 50S ribosomal protein L4; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative 50S ribosomal protein L4 - Protochlamydia
amoebophila (strain UWE25)
Length = 196
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
A TKTRAEV+ KK PQKG GRARHGS +P +RGGG A GPR
Sbjct: 18 ASTKTRAEVKHTTKKAHPQKGQGRARHGSTVAPQYRGGGRAFGPR 62
>UniRef50_Q8KAH3 Cluster: 50S ribosomal protein L4; n=10;
Bacteroidetes/Chlorobi group|Rep: 50S ribosomal protein
L4 - Chlorobium tepidum
Length = 208
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
KTRAEVRGGGKKP+ QKG G AR GS RS L GGG GP+
Sbjct: 52 KTRAEVRGGGKKPFRQKGTGNARQGSTRSGLMVGGGAIFGPQ 93
>UniRef50_Q6UCS1 Cluster: Ribosomal protein L4; n=1; uncultured
marine alpha proteobacterium HOT2C01|Rep: Ribosomal
protein L4 - uncultured marine alpha proteobacterium
HOT2C01
Length = 229
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/93 (34%), Positives = 50/93 (53%)
Frame = +3
Query: 312 NLDSVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKP 491
++ + KK G + L ++ + + ++ S V W A TK R+EV+G +K
Sbjct: 27 DMHKIDGKKSGSVNLKDQLFNSKSGLSVVGSLVRWSESNQKPLRARTKNRSEVKGTTQKL 86
Query: 492 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKS 590
QKG G ARHGS ++ +FR GG+AH R +S
Sbjct: 87 GRQKGSGGARHGSKKANIFRSGGMAHNLRGVRS 119
>UniRef50_Q2IJ86 Cluster: 50S ribosomal protein L4; n=4;
Cystobacterineae|Rep: 50S ribosomal protein L4 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 206
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +3
Query: 324 VQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHT-KTRAEVRGGGKKPWPQ 500
+ +KK+G ++L V+A + + V+ + S H K R+ V GGGKKPW Q
Sbjct: 9 LSKKKVGELDLADAVFAGEVNEHLFYE-VVKAKLASDRSGTHAVKNRSLVSGGGKKPWKQ 67
Query: 501 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
K GRAR GS R+ + GGG A GP+ + + + +P +R L + L+
Sbjct: 68 KHTGRARQGSTRASQWVGGGKAMGPKP-RDYSYDVPKKVRKAALRSALA 115
>UniRef50_O83220 Cluster: 50S ribosomal protein L4; n=5;
Spirochaetaceae|Rep: 50S ribosomal protein L4 -
Treponema pallidum
Length = 216
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/109 (33%), Positives = 54/109 (49%)
Frame = +3
Query: 321 SVQEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQ 500
SV+ L +EL V+ +I+ + + + A TK R+EV G KP+ Q
Sbjct: 7 SVEGVALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQ 66
Query: 501 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
KG GRAR G +SPL GGG GP+ H + LP ++ + + LS
Sbjct: 67 KGTGRARRGDKKSPLLVGGGTIFGPKPRDFH-YALPKKVKRLAMKSLLS 114
>UniRef50_O50061 Cluster: 50S ribosomal protein L4, chloroplast
precursor; n=13; cellular organisms|Rep: 50S ribosomal
protein L4, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 282
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +3
Query: 393 IIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++H ++ A T TR EVRGGG KP+ QK G AR GS R+PL GGGV G
Sbjct: 82 VVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFG 141
Query: 573 PR 578
PR
Sbjct: 142 PR 143
>UniRef50_Q5KM69 Cluster: Ribosomal protein L4, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L4,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 406
Score = 60.1 bits (139), Expect = 5e-08
Identities = 39/101 (38%), Positives = 50/101 (49%)
Frame = +3
Query: 345 LIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARH 524
+I L P V+A P R DI+H V+W TK+R+ V G+K PQKG G+AR
Sbjct: 125 VIALPPDVFAQPIRRDILHRCVVWYLSQLRSGTKSTKSRSTVAYSGRKLIPQKGTGKARA 184
Query: 525 GSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
G S RGG H P K+ LP +R G+ LS
Sbjct: 185 GDASSGTRRGGAPIH-PIFPKNWAQALPRKVRELGMRVALS 224
>UniRef50_Q2S3R3 Cluster: 50S ribosomal protein L4; n=1;
Salinibacter ruber DSM 13855|Rep: 50S ribosomal protein
L4 - Salinibacter ruber (strain DSM 13855)
Length = 215
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +3
Query: 354 LHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSI 533
L P V+ P II +V + + + TK R EVRG G+K + QKG G AR G
Sbjct: 19 LDPTVFDIEPNDHIIWLDVKRIQAHQRQGTSKTKERGEVRGSGRKLYRQKGTGNARVGDA 78
Query: 534 RSPLFRGGGVAHGPR 578
+SP+ RGGG AHG R
Sbjct: 79 QSPIRRGGGRAHGAR 93
>UniRef50_Q3ZZM3 Cluster: 50S ribosomal protein L4; n=3;
Dehalococcoides|Rep: 50S ribosomal protein L4 -
Dehalococcoides sp. (strain CBDB1)
Length = 210
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/100 (36%), Positives = 50/100 (50%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
I + V+ P ++H + Q+ TKTR EV+G +K + QKG G AR G
Sbjct: 16 INISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSSRKIYRQKGTGNARMG 75
Query: 528 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
+ RSP+ R GGVA GPR + LP +R + LS
Sbjct: 76 TNRSPVRRHGGVAFGPRP-RDFSKDLPKKMRRQAIRCVLS 114
>UniRef50_A3CHF3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 323
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +3
Query: 486 KPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
KP+ QKG GRARHG++R P FRGG HGP+ +SH L +R GL LS
Sbjct: 173 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKP-RSHAIKLQKKVRRLGLKIALS 225
>UniRef50_Q7VQE7 Cluster: 50S ribosomal protein L4; n=6;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Blochmannia floridanus
Length = 212
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGK 587
K+R++V G KKPW QKG GRAR GS++SP++R GGV + K
Sbjct: 56 KSRSDVSGSNKKPWRQKGTGRARSGSVKSPIWRSGGVTFASKPKK 100
>UniRef50_Q1AU30 Cluster: Ribosomal protein L4/L1e; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Ribosomal protein L4/L1e -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 211
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
+EL + P+ +IH V+ + + A T+ R+EV G G K + QKG GRAR G
Sbjct: 17 MELKGPRFETEPKQHVIHRAVVAELEARRRWTASTRERSEVAGSGAKLYRQKGTGRARAG 76
Query: 528 SIRSPLFRGGGVAHGPR 578
I+SPL GGG GP+
Sbjct: 77 DIKSPLRHGGGTWGGPK 93
>UniRef50_Q54RB5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 258
Score = 56.0 bits (129), Expect = 7e-07
Identities = 46/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 204 NSAAVTTTTANKTINILKKEWEFPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPP 383
NS TTTT T+ +K+ K EV + N + + + I+L V++ P
Sbjct: 22 NSLKYTTTTTTTTV---QKKTAAQLFADKTIEVPVLNFND-KLSPIENIQLSKDVFSVPL 77
Query: 384 RIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
R+D++H V +QR + KKP QKG G AR G+ S FRGG
Sbjct: 78 RVDLLHRMVRYQRAKSQQGTHQALNMGRMERTNKKPTRQKGSGNARKGTNHSVHFRGGAR 137
Query: 564 AHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
P + +SH LP +R L LS
Sbjct: 138 TFAP-TMRSHAHDLPRKVRKLCLKVALS 164
>UniRef50_Q00UM3 Cluster: Chromosome 16 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 367
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = -3
Query: 574 GPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPPRTSALVLVCAQETHXYFLCH 413
GP TPPP G +EP A P PFC +GF PPPRTS V V A Y + H
Sbjct: 118 GPNDTPPPGLSGVRLEPARALPVPFCLNGFRPPPRTSLFVSVLAVPCESYEIVH 171
>UniRef50_Q4FLL9 Cluster: 50S ribosomal protein L4; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L4 -
Pelagibacter ubique
Length = 207
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
A TK + E+ G K + QKG G ARH S ++P+F GGGVAHGP+
Sbjct: 47 AKTKQQNEITGSTSKIYAQKGTGGARHASRKAPIFVGGGVAHGPK 91
>UniRef50_O74801 Cluster: Mitochondrial ribosomal protein subunit
Yml6; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit Yml6 - Schizosaccharomyces
pombe (Fission yeast)
Length = 261
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +3
Query: 384 RIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
R DI+H VI++ A +K R E+ G+K + QKG G AR G SP+ RGG
Sbjct: 34 RRDILHRAVIYEADNDRQGTASSKRRNEITCSGRKLYRQKGTGHARVGDASSPIRRGGAK 93
Query: 564 AHGPR 578
+HGP+
Sbjct: 94 SHGPK 98
>UniRef50_Q5L719 Cluster: 50S ribosomal protein L4; n=8;
Chlamydiaceae|Rep: 50S ribosomal protein L4 -
Chlamydophila abortus
Length = 224
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
A T+ R+EV KKP+ QKG G AR G + +P FRGGG+ GP+
Sbjct: 50 ACTRNRSEVSHSTKKPFRQKGTGNARQGCLAAPQFRGGGIVFGPK 94
>UniRef50_Q8KTP1 Cluster: Ribosomal protein L4; n=1; Candidatus
Tremblaya princeps|Rep: Ribosomal protein L4 - Tremblaya
princeps
Length = 198
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKS 590
++R EV +KPW QKGLGRAR G SPL+RGGG A R+ S
Sbjct: 42 RSRGEVSHSTRKPWRQKGLGRARAGMTSSPLWRGGGRAFPSRTAAS 87
>UniRef50_Q9AIG3 Cluster: Ribosomal protein L4; n=4; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L4 - Carsonella
ruddii
Length = 172
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +3
Query: 447 HTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 563
+ K R V G GKKPW QKG GRAR G +SP++R GGV
Sbjct: 39 YKKNRRLVFGSGKKPWIQKGTGRARAGDKKSPIWRSGGV 77
>UniRef50_Q5P331 Cluster: 50S ribosomal protein L4; n=26;
Proteobacteria|Rep: 50S ribosomal protein L4 - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHF 596
K RAEV +KPW QKG GRAR G SPL+RGGG P S + +F
Sbjct: 51 KGRAEVSKSTRKPWRQKGTGRARAGMASSPLWRGGGRVF-PNSPEDNF 97
>UniRef50_Q7YN80 Cluster: Ribosomal protein L4; n=1; Eimeria
tenella|Rep: Ribosomal protein L4 - Eimeria tenella
Length = 213
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRS 581
Y + ++T + + KKPW QKGLG AR GS +SPL++GG GP++
Sbjct: 62 YHKIKKSNTINKNNLSKSTKKPWKQKGLGMARSGSFKSPLWKGGIKLFGPKN 113
>UniRef50_Q62GK6 Cluster: 50S ribosomal protein L4; n=71;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Burkholderia mallei (Pseudomonas mallei)
Length = 206
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
K R +V+ KKPW QKG GRAR G SPL+RGGG
Sbjct: 51 KDREQVKHTTKKPWRQKGTGRARAGMSSSPLWRGGG 86
>UniRef50_Q7UN19 Cluster: 50S ribosomal protein L4; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L4 -
Rhodopirellula baltica
Length = 222
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = +3
Query: 333 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLG 512
K++G E+ A ++H V+ + +T+TR +V G KK + QKG G
Sbjct: 12 KEVGQYEIDTEQIANRVSKQLLHDVVVMYQANKRQGSHNTRTRGQVSGTNKKMYRQKGTG 71
Query: 513 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLP 608
AR GS R+ + RGGGVA + + + + LP
Sbjct: 72 NARAGSKRTNVRRGGGVARTVKP-RDYSYRLP 102
>UniRef50_Q1NYY2 Cluster: 50S ribosomal protein L4; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 50S
ribosomal protein L4 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 207
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 450 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 578
+K R+E+ G KK QKG G AR G I++P+FR GG GP+
Sbjct: 50 SKERSEITGSTKKIQRQKGSGNARKGDIKNPIFRSGGRIFGPK 92
>UniRef50_Q82X87 Cluster: 50S ribosomal protein L4; n=24;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Nitrosomonas europaea
Length = 206
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 560
K R++V G +K W QKG GRAR G+ +PL+RGGG
Sbjct: 51 KGRSDVTGSTRKQWRQKGTGRARTGAATNPLWRGGG 86
>UniRef50_P51998 Cluster: 54S ribosomal protein YmL6, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 54S ribosomal
protein YmL6, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 286
Score = 44.8 bits (101), Expect = 0.002
Identities = 37/119 (31%), Positives = 52/119 (43%)
Frame = +3
Query: 210 AAVTTTTANKTINILKKEWEFPPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYAAPPRI 389
A T A T+N L PP Y V + + S++ L + + AAP R
Sbjct: 18 ATTATAHAESTLNPLPNA-AIPPKYAL---VTVRSFPSLEP--LTFVPVPTSTVAAPLRR 71
Query: 390 DIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVA 566
DI+ V+++ V ++ R+E +K PQKG GRAR G SP GG A
Sbjct: 72 DILWRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQKGSGRARVGDANSPTRHNGGRA 130
>UniRef50_Q7MTL4 Cluster: 50S ribosomal protein L4; n=29; cellular
organisms|Rep: 50S ribosomal protein L4 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 209
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/65 (40%), Positives = 34/65 (52%)
Frame = +3
Query: 453 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 632
K R+E+ G +K QKG G AR G I SPL GG GPR +++ F L L+
Sbjct: 52 KERSELSGSTRKLIRQKGSGGARRGDINSPLLSGGARVFGPRP-RNYSFKLNKKLKALAR 110
Query: 633 TTTLS 647
+ LS
Sbjct: 111 RSALS 115
>UniRef50_A3LWF5 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 245
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 375 APPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRG 554
AP R D + S V+++ V + T+ + KK PQKG G+AR G SP
Sbjct: 48 APTRRDFLWSAVVYEADKARVGSGYVPTKGDKLFSNKKLRPQKGSGKARVGDANSPTRDN 107
Query: 555 GGVAHG 572
G AHG
Sbjct: 108 GIKAHG 113
>UniRef50_Q5AFP9 Cluster: Likely mitochondrial ribosomal protein;
n=2; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 278
Score = 41.5 bits (93), Expect = 0.017
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 LNSAAVTTTTANKTINILKKEWEF--PPLYTKPREVWIXNLDSVQEKKLGLIELHPMVYA 374
++SAA TTTTA+ T F PP YT + + S++ K +
Sbjct: 15 ISSAAATTTTASTTSTTTTASLNFAKPPSYTLAQ---LREFPSLEPKTFIPLPTTFFNTE 71
Query: 375 APPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSP 542
P R DI+ S V ++ V + +++ +K PQKG GRAR G SP
Sbjct: 72 KPIRRDILWSCVTYEADKARVGSNYAILKSDSPYSNRKLRPQKGSGRARLGDANSP 127
>UniRef50_Q25805 Cluster: Rpl4 protein; n=1; Plasmodium
falciparum|Rep: Rpl4 protein - Plasmodium falciparum
Length = 190
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 426 YXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 575
Y + HTK +++V KK QKGLG+AR + +SP+ + G GP
Sbjct: 48 YNIYMYKHTKNKSKVYFSNKKIRVQKGLGKARLKNFKSPVCKQGACNFGP 97
>UniRef50_Q9MTE6 Cluster: Ribosomal protein L4; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L4 - Toxoplasma gondii
Length = 211
Score = 35.9 bits (79), Expect = 0.84
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 444 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 572
++TK +A KK QKG G+AR GS +S L +GG VA G
Sbjct: 61 SNTKNKAFSSYSNKKLRQQKGSGKARIGSKKSVLQKGGSVAFG 103
>UniRef50_Q339M5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 246
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 464 RSSGWRQETVATERVGSRQTWLNKITPISWWRCSPWSSLRQIALLYATI 610
RS GW R G+R +W + SWW W S R + A +
Sbjct: 92 RSGGWPAGDGGPTRGGARGSWRRRRRSCSWWSSQQWCSRRHLETAAAVV 140
>UniRef50_Q190J3 Cluster: Methyl-accepting chemotaxis sensory
transducer precursor; n=2; Desulfitobacterium
hafniense|Rep: Methyl-accepting chemotaxis sensory
transducer precursor - Desulfitobacterium hafniense
(strain DCB-2)
Length = 501
Score = 34.7 bits (76), Expect = 2.0
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = -3
Query: 415 HITLLWIMSIL--GGAA*TMGCNSIKPSFFSCTLSKXSIQTSLGLVYSGGNSHSFFKMLI 242
++ L+WI+S L G + TMG + +CT + T L N H LI
Sbjct: 18 NVILIWIISTLLSGQSFLTMGA-VYGVNVLACTFGAALVATLALLFNLKFNRHESITALI 76
Query: 241 VLFAVVVVTAAEFNEHKRI*GDTCSLFIAL---ISIEAMF*ELFINYTHNKKMFQNISIF 71
+ F++VV +A + H T ++FI +++ AM+ + + T+ + +S+F
Sbjct: 77 ISFSIVV--SASYLGHMTHGATTATIFIVYLGSLAMIAMYFRVRLLLTYAVLLNLFLSVF 134
Query: 70 YF 65
YF
Sbjct: 135 YF 136
>UniRef50_A0CQM2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 318
Score = 34.7 bits (76), Expect = 2.0
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = +3
Query: 348 IELHPMVYAAPPRIDIIHSNVIWQRKYXWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 527
I L ++ P R D++ V + Y T + G K PQK GRAR G
Sbjct: 50 IALDQEIFNQPIRRDLVQRLVRYTDLYDKKVTKATLALRDAAASGAKNHPQKKTGRARQG 109
Query: 528 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLH----GLTTTL 644
+ P G AHG R +S LP +RL GLT L
Sbjct: 110 HRQRPGRNKGIKAHG-RKIRSLRIDLPRKVRLQAYKVGLTAAL 151
>UniRef50_Q4EE76 Cluster: Ribosomal protein L4/L1 family; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Ribosomal
protein L4/L1 family - Listeria monocytogenes str. 4b
H7858
Length = 149
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 528 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLS 647
SIRSP +RGGGV GP + +S+ + LP +R + + LS
Sbjct: 19 SIRSPQWRGGGVVFGP-TPRSYAYKLPKKVRRLAIKSILS 57
>UniRef50_Q6IKC3 Cluster: HDC12883; n=1; Drosophila
melanogaster|Rep: HDC12883 - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +3
Query: 342 GLIELHP---MVYAAPPRIDIIHSNVIWQRKYXWVSWAHT-KTRAEVRGGGKKPWPQKGL 509
G++E HP + AP I+ + W R W +WA T R G K WPQ+
Sbjct: 59 GVMEPHPPDPALKVAPTSAHIVLYSWAWSRFRFW-AWASTWANEPSPRNNGHKTWPQERS 117
Query: 510 GRAR 521
G R
Sbjct: 118 GSGR 121
>UniRef50_Q4UFI5 Cluster: Cation-transporting ATPase; n=1; Theileria
annulata|Rep: Cation-transporting ATPase - Theileria
annulata
Length = 2559
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 175 TCSLFIALISIEAMF*ELFINYTHNKKMFQNISIFYFFI 59
T L I++ SI +L INYT N K+F+ IS+ Y+ +
Sbjct: 1263 TFGLLISVSSIIIFNTKLLINYTPNTKLFRFISVVYYLV 1301
>UniRef50_Q0UK53 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 516
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 168 LHVSPQIRLCSLNSAAVTTTTANKTINILKKEWEFPPLY 284
L ++P ++LC+ A +T LKK+W+FP Y
Sbjct: 8 LLLAPGVQLCAAQEAMQALSTNETACTALKKDWDFPRAY 46
>UniRef50_UPI000023E898 Cluster: hypothetical protein FG02472.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02472.1 - Gibberella zeae PH-1
Length = 1200
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 586 LPERGPWATPPPRNRGDLI-EPCLARPNPFCGHGFLPPPRTSA 461
+P + PWAT PP + I EP PF LPPP+ A
Sbjct: 319 VPVKSPWATLPPVEKASPIPEPATLARQPFNKGMTLPPPKEIA 361
>UniRef50_Q8KFV4 Cluster: Glycosyl transferase; n=2;
Chlorobiaceae|Rep: Glycosyl transferase - Chlorobium
tepidum
Length = 316
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 405 CCGLCRS*VEPHKPWDV-IRLSRVFFLVHCPNXRSKPLW 292
C GL S +PH WD+ +R++ VHC R+ +W
Sbjct: 164 CVGLFDSFTQPHDDWDMYLRIALAGISVHCYRERALSVW 202
>UniRef50_A0THM1 Cluster: Conjugal transfer protein TrbG/VirB9/CagX
precursor; n=3; Burkholderia cepacia complex|Rep:
Conjugal transfer protein TrbG/VirB9/CagX precursor -
Burkholderia ambifaria MC40-6
Length = 293
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 643 SVVVKPCSLR*NGSIKKCDLPERGPWATPPPRNRGDLIEPCLARPNPF 500
S +KP ++ +G LP+ P+A P R GD++ P R P+
Sbjct: 215 SGAIKPETVFDDGKFVWIRLPQNAPFAVPTVREGGDIVSPNFIRRGPY 262
>UniRef50_A7DNT6 Cluster: Major facilitator superfamily MFS_1; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Major
facilitator superfamily MFS_1 - Candidatus
Nitrosopumilus maritimus SCM1
Length = 382
Score = 32.7 bits (71), Expect = 7.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 424 FLCHITLLWIMSILGGAA*TMGCN--SIKPSFFSCTLSKXSIQTSLGLVYSGGNSHSFFK 251
F+ + W +GG M N S FS TLS I T +G V +GG + +F
Sbjct: 303 FMSLVGATWAFLFIGGNFHLMDNNPRSTSTGIFSSTLS---IATVVGPVIAGGIAFAFDY 359
Query: 250 MLIVLFAVVVVTAA 209
+ ++ FA+ ++ +A
Sbjct: 360 VAVMYFAIAIIVSA 373
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,983,415
Number of Sequences: 1657284
Number of extensions: 16271923
Number of successful extensions: 42821
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 41196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42782
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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