Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_F04
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 27 0.18
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 24 0.94
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.6
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 22 3.8
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 5.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 5.0
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 5.0
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 6.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.6
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 6.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.7
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 8.7
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 26.6 bits (56), Expect = 0.18
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 120 KSS*NMASILINAIKRLHVSPQIRLCSLNSAAVTTTTANKTINILKKEWEFPP 278
++S ++++ I+ ++ HV L S NSA+VTT T + IN+ W P
Sbjct: 655 RASKRVSTLSIDNVQSTHVGNYTCLAS-NSASVTTYTTSLFINV-PPRWILEP 705
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 24.2 bits (50), Expect = 0.94
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 527 AMSGATQPFLWPRFLASTPNFCSRLGMCPG 438
AMS AT P + +F A S +G PG
Sbjct: 97 AMSAATDPSVVSKFRAGFSECASEVGRFPG 126
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 127 ELFINYTHNKKMFQNISIFYFFIKI 53
+L ++Y H K+ +NIS+ Y +I
Sbjct: 863 DLLMDYEHTVKINENISMLYIGYQI 887
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 127 ELFINYTHNKKMFQNISIFYFFIKI 53
+L ++Y H K+ +NIS+ Y +I
Sbjct: 863 DLLMDYEHTVKINENISMLYIGYQI 887
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.2 bits (45), Expect = 3.8
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 115 NYTHNKKMFQNI 80
NYTHN +M+ ++
Sbjct: 38 NYTHNNEMYHSV 49
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 115 NYTHNKKMFQNI 80
NYTHN +M+ +
Sbjct: 38 NYTHNNEMYHRV 49
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 127 ELFINYTHNKKMFQNISIFYFFIKI 53
+L ++Y H K+ +NIS+ Y +I
Sbjct: 630 DLLMDYEHTVKINENISMPYIGYQI 654
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.8 bits (44), Expect = 5.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 115 NYTHNKKMFQNI 80
NYTHN +M+ +
Sbjct: 38 NYTHNNEMYHRV 49
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -3
Query: 577 RGPWATPPPRNRGDLIEPCLARPNP 503
R WA PP D +P P P
Sbjct: 409 RPEWARPPSTPSADGSKPVQTTPKP 433
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +1
Query: 283 TPNPERFGSXIWTVYKKKNSA*SNYIPWFMRLHLGST 393
T + E+ G+ ++S PW R+HLG +
Sbjct: 176 TSSTEKAGTNNNNSKSSQSSNPPQIYPWMKRVHLGQS 212
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/34 (20%), Positives = 17/34 (50%)
Frame = +2
Query: 446 TYQDESRSSGWRQETVATERVGSRQTWLNKITPI 547
TY + + SS W ++ + + ++W + P+
Sbjct: 209 TYTNSANSSIWSPASIDSFTLEQHRSWCSSSQPV 242
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 158 PWMKRVHLGQS 168
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 361 PWFMRLHLGST 393
PW R+HLG +
Sbjct: 202 PWMKRVHLGQS 212
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 633 LSHVA*DEMVA*RSAICLSEDHGLHLHH 550
+SH MV + LS DH LHH
Sbjct: 322 MSHEELSAMVNRCHPLSLSSDHQAMLHH 349
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,131
Number of Sequences: 336
Number of extensions: 4288
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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